RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 C4AP0C0L4 1744 aa24.02■■□□□ 1.44
LMNB1-202ENST00000395354 HMMRO75330 724 aa24.02■■□□□ 1.44
LMNB1-202ENST00000395354 ZNF652Q9Y2D9 606 aa24.02■■□□□ 1.44
LMNB1-202ENST00000395354 QSER1Q2KHR3 1735 aa24.01■■□□□ 1.43
LMNB1-202ENST00000395354 RGL2O15211 777 aa24.01■■□□□ 1.43
LMNB1-202ENST00000395354 GYS1P13807 737 aa24.01■■□□□ 1.43
LMNB1-202ENST00000395354 PDGFDQ9GZP0 370 aaPredicted RBP24.01■■□□□ 1.43
LMNB1-202ENST00000395354 NEXNQ0ZGT2 675 aa24■■□□□ 1.43
LMNB1-202ENST00000395354 TCIRG1Q13488 830 aa24■■□□□ 1.43
LMNB1-202ENST00000395354 HSP90AB3PQ58FF7 597 aa24■■□□□ 1.43
LMNB1-202ENST00000395354 BEND3Q5T5X7 828 aa23.99■■□□□ 1.43
LMNB1-202ENST00000395354 MYD88Q99836 296 aa23.99■■□□□ 1.43
LMNB1-202ENST00000395354 IBTKQ9P2D0 1353 aaPredicted RBP23.99■■□□□ 1.43
LMNB1-202ENST00000395354 PSDA5PKW4 1024 aaPredicted RBP23.99■■□□□ 1.43
LMNB1-202ENST00000395354 USP44Q9H0E7 712 aa23.99■■□□□ 1.43
LMNB1-202ENST00000395354 NUP98P52948 1817 aa23.99■■□□□ 1.43
LMNB1-202ENST00000395354 ARFGEF2Q9Y6D5 1785 aa23.98■■□□□ 1.43
LMNB1-202ENST00000395354 ATP5J2-PTCD1G3V325 749 aa23.98■■□□□ 1.43
LMNB1-202ENST00000395354 ANKRD45Q5TZF3 282 aa23.98■■□□□ 1.43
LMNB1-202ENST00000395354 ALDH1L1O75891 902 aa23.97■■□□□ 1.43
LMNB1-202ENST00000395354 NLGN1Q8N2Q7 840 aa23.97■■□□□ 1.43
LMNB1-202ENST00000395354 BCORQ6W2J9 1755 aa23.96■■□□□ 1.43
LMNB1-202ENST00000395354 GPTP24298 496 aa23.96■■□□□ 1.43
LMNB1-202ENST00000395354 TBC1D9BQ66K14 1250 aa23.96■■□□□ 1.43
LMNB1-202ENST00000395354 BICDL1Q6ZP65 573 aa23.96■■□□□ 1.43
LMNB1-202ENST00000395354 ZNF34Q8IZ26 560 aa23.96■■□□□ 1.43
LMNB1-202ENST00000395354 LINS1Q8NG48 757 aa23.96■■□□□ 1.43
LMNB1-202ENST00000395354 SLC16A10Q8TF71 515 aa23.96■■□□□ 1.43
LMNB1-202ENST00000395354 IGKV5-2P06315 115 aa23.95■■□□□ 1.43
LMNB1-202ENST00000395354 UBTFL1P0CB47 393 aaPredicted RBP23.95■■□□□ 1.43
LMNB1-202ENST00000395354 ANP32AP39687 249 aaKnown RBP23.95■■□□□ 1.43
LMNB1-202ENST00000395354 ISCA1Q9BUE6 129 aa23.95■■□□□ 1.43
LMNB1-202ENST00000395354 LNPKQ9C0E8 428 aa23.95■■□□□ 1.43
LMNB1-202ENST00000395354 NIP7Q9Y221 180 aaKnown RBP eCLIP23.95■■□□□ 1.43
LMNB1-202ENST00000395354 SCN7AQ01118 1682 aa23.95■■□□□ 1.42
LMNB1-202ENST00000395354 ATP8B2P98198 1209 aa23.95■■□□□ 1.42
LMNB1-202ENST00000395354 TRIM28Q13263 835 aaKnown RBP23.95■■□□□ 1.42
LMNB1-202ENST00000395354 CWF19L2Q2TBE0 894 aaKnown RBP23.95■■□□□ 1.42
LMNB1-202ENST00000395354 HDAC5Q9UQL6 1122 aa23.95■■□□□ 1.42
LMNB1-202ENST00000395354 SETDB2Q96T68 719 aa23.94■■□□□ 1.42
LMNB1-202ENST00000395354 NEURL1BA8MQ27 555 aa23.93■■□□□ 1.42
LMNB1-202ENST00000395354 NFIXQ14938 502 aa23.93■■□□□ 1.42
LMNB1-202ENST00000395354 MSL1Q68DK7 614 aa23.93■■□□□ 1.42
LMNB1-202ENST00000395354 TM4SF1P30408 202 aa23.92■■□□□ 1.42
LMNB1-202ENST00000395354 NLRP10Q86W26 655 aa23.92■■□□□ 1.42
LMNB1-202ENST00000395354 CCDC191Q8NCU4 936 aa23.92■■□□□ 1.42
LMNB1-202ENST00000395354 ZBTB47Q9UFB7 747 aaPredicted RBP23.91■■□□□ 1.42
LMNB1-202ENST00000395354 UBN2Q6ZU65 1347 aa23.91■■□□□ 1.42
LMNB1-202ENST00000395354 PARP10Q53GL7 1025 aa23.91■■□□□ 1.42
LMNB1-202ENST00000395354 CWC25Q9NXE8 425 aaPredicted RBP23.91■■□□□ 1.42
LMNB1-202ENST00000395354 LRRFIP2Q9Y608 721 aaKnown RBP23.91■■□□□ 1.42
LMNB1-202ENST00000395354 GCKRQ14397 625 aa23.9■■□□□ 1.42
LMNB1-202ENST00000395354 ANKRD36CQ5JPF3 1778 aa23.89■■□□□ 1.42
LMNB1-202ENST00000395354 FAM177BA6PVY3 158 aa23.89■■□□□ 1.41
LMNB1-202ENST00000395354 ZBTB7AO95365 584 aa23.89■■□□□ 1.41
LMNB1-202ENST00000395354 SUSD4Q5VX71 490 aa23.89■■□□□ 1.41
LMNB1-202ENST00000395354 MMP10P09238 476 aa23.88■■□□□ 1.41
LMNB1-202ENST00000395354 CASZ1Q86V15 1759 aa23.88■■□□□ 1.41
LMNB1-202ENST00000395354 PPP1R42Q7Z4L9 355 aa23.87■■□□□ 1.41
LMNB1-202ENST00000395354 MTFR1LQ9H019 292 aa23.87■■□□□ 1.41
LMNB1-202ENST00000395354 UTYO14607 1347 aa23.87■■□□□ 1.41
LMNB1-202ENST00000395354 DDR1Q08345 913 aa23.86■■□□□ 1.41
LMNB1-202ENST00000395354 BMP2KLQ5H9B9 411 aa23.86■■□□□ 1.41
LMNB1-202ENST00000395354 SSH3Q8TE77 659 aa23.86■■□□□ 1.41
LMNB1-202ENST00000395354 UTP14AQ9BVJ6 771 aaKnown RBP23.86■■□□□ 1.41
LMNB1-202ENST00000395354 C9orf78Q9NZ63 289 aaPredicted RBP23.86■■□□□ 1.41
LMNB1-202ENST00000395354 TRMT112Q9UI30 125 aaKnown RBP23.86■■□□□ 1.41
LMNB1-202ENST00000395354 ATF5Q9Y2D1 282 aaPredicted RBP23.86■■□□□ 1.41
LMNB1-202ENST00000395354 AFDNP55196 1824 aaKnown RBP23.86■■□□□ 1.41
LMNB1-202ENST00000395354 NBPF5PQ86XG9 351 aaPredicted RBP23.86■■□□□ 1.41
LMNB1-202ENST00000395354 CARMIL3Q8ND23 1372 aa23.86■■□□□ 1.41
LMNB1-202ENST00000395354 POLRMTO00411 1230 aaKnown RBP23.85■■□□□ 1.41
LMNB1-202ENST00000395354 SERPINB2P05120 415 aa23.85■■□□□ 1.41
LMNB1-202ENST00000395354 NBPF7P0C2Y1 421 aaPredicted RBP23.85■■□□□ 1.41
LMNB1-202ENST00000395354 TPTE2Q6XPS3 522 aa23.85■■□□□ 1.41
LMNB1-202ENST00000395354 PARP3Q9Y6F1 533 aa23.85■■□□□ 1.41
LMNB1-202ENST00000395354 PNMA6EA0A0J9YXQ4 647 aa23.84■■□□□ 1.41
LMNB1-202ENST00000395354 GRM8O00222 908 aa23.84■■□□□ 1.41
LMNB1-202ENST00000395354 POLA2Q14181 598 aa23.84■■□□□ 1.41
LMNB1-202ENST00000395354 RTL5Q5HYW3 569 aaPredicted RBP23.84■■□□□ 1.41
LMNB1-202ENST00000395354 ZBTB38Q8NAP3 1195 aaPredicted RBP23.84■■□□□ 1.41
LMNB1-202ENST00000395354 JARID2Q92833 1246 aaPredicted RBP23.84■■□□□ 1.41
LMNB1-202ENST00000395354 FAM89AQ96GI7 184 aa23.84■■□□□ 1.41
LMNB1-202ENST00000395354 NYXQ9GZU5 481 aa23.84■■□□□ 1.41
LMNB1-202ENST00000395354 H7C1W4 665 aa23.83■■□□□ 1.41
LMNB1-202ENST00000395354 NTSR2O95665 410 aa23.83■■□□□ 1.41
LMNB1-202ENST00000395354 GTF2E1P29083 439 aaPredicted RBP23.83■■□□□ 1.41
LMNB1-202ENST00000395354 MTX1Q13505 466 aa23.83■■□□□ 1.41
LMNB1-202ENST00000395354 PCCAP05165 728 aaPredicted RBP23.82■■□□□ 1.4
LMNB1-202ENST00000395354 UBE3BQ7Z3V4 1068 aa23.82■■□□□ 1.4
LMNB1-202ENST00000395354 IPO9Q96P70 1041 aaKnown RBP23.82■■□□□ 1.4
LMNB1-202ENST00000395354 NPHP1O15259 732 aa23.82■■□□□ 1.4
LMNB1-202ENST00000395354 NUTM1Q86Y26 1132 aa23.82■■□□□ 1.4
LMNB1-202ENST00000395354 PLEKHM2Q8IWE5 1019 aa23.82■■□□□ 1.4
LMNB1-202ENST00000395354 SYNE4Q8N205 404 aa23.82■■□□□ 1.4
LMNB1-202ENST00000395354 SH3TC1Q8TE82 1336 aa23.81■■□□□ 1.4
LMNB1-202ENST00000395354 RAB11FIP3O75154 756 aa23.8■■□□□ 1.4
LMNB1-202ENST00000395354 POLD1P28340 1107 aa23.8■■□□□ 1.4
LMNB1-202ENST00000395354 CNBD1Q8NA66 436 aa23.8■■□□□ 1.4
LMNB1-202ENST00000395354 COL24A1Q17RW2 1714 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 1274.8 ms