RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ADCK5Q3MIX3 580 aa21.99■■□□□ 1.11
PCDHA1-202ENST00000394633 TPRNQ4KMQ1 711 aa21.99■■□□□ 1.11
PCDHA1-202ENST00000394633 AKAP4Q5JQC9 854 aa21.99■■□□□ 1.11
PCDHA1-202ENST00000394633 RUFY2Q8WXA3 655 aa21.99■■□□□ 1.11
PCDHA1-202ENST00000394633 CCDC83Q8IWF9 413 aa21.98■■□□□ 1.11
PCDHA1-202ENST00000394633 CLASRPQ8N2M8 674 aaKnown RBP21.98■■□□□ 1.11
PCDHA1-202ENST00000394633 CHMP4AQ9BY43 222 aa21.98■■□□□ 1.11
PCDHA1-202ENST00000394633 BTG4Q9NY30 223 aa21.98■■□□□ 1.11
PCDHA1-202ENST00000394633 USP25Q9UHP3 1055 aa21.98■■□□□ 1.11
PCDHA1-202ENST00000394633 FIBPO43427 364 aa21.98■■□□□ 1.11
PCDHA1-202ENST00000394633 LETM1O95202 739 aaPredicted RBP21.98■■□□□ 1.11
PCDHA1-202ENST00000394633 KCNB2Q92953 911 aa21.98■■□□□ 1.11
PCDHA1-202ENST00000394633 JAKMIP1Q96N16 626 aaKnown RBP21.98■■□□□ 1.11
PCDHA1-202ENST00000394633 ECHDC1Q9NTX5 307 aa21.98■■□□□ 1.11
PCDHA1-202ENST00000394633 BTBD11A6QL63 1104 aa21.97■■□□□ 1.11
PCDHA1-202ENST00000394633 HCLS1P14317 486 aaPredicted RBP21.97■■□□□ 1.11
PCDHA1-202ENST00000394633 GJB2P29033 226 aa21.97■■□□□ 1.11
PCDHA1-202ENST00000394633 KIAA2012Q0VF49 1180 aa21.97■■□□□ 1.11
PCDHA1-202ENST00000394633 VPS53Q5VIR6 699 aa21.97■■□□□ 1.11
PCDHA1-202ENST00000394633 PRPF40BQ6NWY9 871 aaKnown RBP21.97■■□□□ 1.11
PCDHA1-202ENST00000394633 PDRG1Q9NUG6 133 aa21.97■■□□□ 1.11
PCDHA1-202ENST00000394633 DTNBO60941 627 aa21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 TEFQ10587 303 aa21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 SASS6Q6UVJ0 657 aa21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 VSIG10Q8N0Z9 540 aa21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 ZSWIM6Q9HCJ5 1215 aa21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 MTMR6Q9Y217 621 aa21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 ATP6V1DQ9Y5K8 247 aa21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 TATP17735 454 aaPredicted RBP21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 ST3GAL1Q11201 340 aa21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 TM6SF1Q9BZW5 370 aa21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 PA2G4Q9UQ80 394 aaKnown RBP21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 PKD1L3Q7Z443 1732 aa21.96■■□□□ 1.11
PCDHA1-202ENST00000394633 C1orf141Q5JVX7 400 aa21.95■■□□□ 1.1
PCDHA1-202ENST00000394633 MPNDQ8N594 471 aa21.95■■□□□ 1.1
PCDHA1-202ENST00000394633 MAP3K2Q9Y2U5 619 aa21.95■■□□□ 1.1
PCDHA1-202ENST00000394633 COL14A1Q05707 1796 aaKnown RBP21.95■■□□□ 1.1
PCDHA1-202ENST00000394633 ADAMTS2O95450 1211 aa21.95■■□□□ 1.1
PCDHA1-202ENST00000394633 FUCA2Q9BTY2 467 aa21.95■■□□□ 1.1
PCDHA1-202ENST00000394633 DBF4Q9UBU7 674 aaPredicted RBP21.95■■□□□ 1.1
PCDHA1-202ENST00000394633 ALDH1L1O75891 902 aa21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 ADCY5O95622 1261 aa21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 NECTIN1Q15223 517 aa21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 ZSCAN31Q96LW9 406 aaPredicted RBP21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 C9orf78Q9NZ63 289 aaPredicted RBP21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 CYP46A1Q9Y6A2 500 aa21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 EVA1CP58658 441 aa21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 DNM1Q05193 864 aaKnown RBP21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 PROSER3Q2NL68 480 aa21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 SH2B1Q9NRF2 756 aaPredicted RBP21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 FAM13BQ9NYF5 915 aa21.94■■□□□ 1.1
PCDHA1-202ENST00000394633 IFIT2P09913 472 aaKnown RBP21.93■■□□□ 1.1
PCDHA1-202ENST00000394633 CERKQ8TCT0 537 aa21.93■■□□□ 1.1
PCDHA1-202ENST00000394633 GPATCH3Q96I76 525 aa21.93■■□□□ 1.1
PCDHA1-202ENST00000394633 ZNF830Q96NB3 372 aaPredicted RBP21.93■■□□□ 1.1
PCDHA1-202ENST00000394633 CCDC171Q6TFL3 1326 aa21.93■■□□□ 1.1
PCDHA1-202ENST00000394633 OVOS2A0A0G2JMS6 1433 aa21.93■■□□□ 1.1
PCDHA1-202ENST00000394633 RNMTO43148 476 aaKnown RBP21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 ERC1Q8IUD2 1116 aa21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 EVI5LQ96CN4 794 aa21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 KDM6AO15550 1401 aaPredicted RBP21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 ADAMTS7Q9UKP4 1686 aa21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 NUTM2BA6NNL0 878 aaPredicted RBP21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 NUTM2EB1AL46 878 aaPredicted RBP21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 DYNC1I1O14576 645 aa21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 CYP27B1O15528 508 aa21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 ME3Q16798 604 aa21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 NUTM2AQ8IVF1 878 aaPredicted RBP21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 DDX54Q8TDD1 881 aaKnown RBP21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 CARD10Q9BWT7 1032 aa21.92■■□□□ 1.1
PCDHA1-202ENST00000394633 PARP4Q9UKK3 1724 aaKnown RBP21.91■■□□□ 1.1
PCDHA1-202ENST00000394633 CWF19L2Q2TBE0 894 aaKnown RBP21.91■■□□□ 1.1
PCDHA1-202ENST00000394633 GIMAP6Q6P9H5 292 aa21.91■■□□□ 1.1
PCDHA1-202ENST00000394633 KSR2Q6VAB6 950 aa21.91■■□□□ 1.1
PCDHA1-202ENST00000394633 AACSQ86V21 672 aa21.91■■□□□ 1.1
PCDHA1-202ENST00000394633 SIPA1L3O60292 1781 aaPredicted RBP21.91■■□□□ 1.1
PCDHA1-202ENST00000394633 PLCH1Q4KWH8 1693 aa21.91■■□□□ 1.1
PCDHA1-202ENST00000394633 PHKG2P15735 406 aa21.91■■□□□ 1.1
PCDHA1-202ENST00000394633 RBM8AQ9Y5S9 174 aaKnown RBP21.91■■□□□ 1.1
PCDHA1-202ENST00000394633 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.91■■□□□ 1.1
PCDHA1-202ENST00000394633 KDM4AO75164 1064 aa21.9■■□□□ 1.1
PCDHA1-202ENST00000394633 NECAB1Q8N987 351 aa21.9■■□□□ 1.1
PCDHA1-202ENST00000394633 PIBF1Q8WXW3 757 aa21.9■■□□□ 1.1
PCDHA1-202ENST00000394633 GIGYF1O75420 1035 aaPredicted RBP21.9■■□□□ 1.1
PCDHA1-202ENST00000394633 CREB3L3Q68CJ9 461 aa21.9■■□□□ 1.1
PCDHA1-202ENST00000394633 FAM227BQ96M60 508 aa21.9■■□□□ 1.1
PCDHA1-202ENST00000394633 SCN11AQ9UI33 1791 aa21.89■■□□□ 1.1
PCDHA1-202ENST00000394633 VPS37CA5D8V6 355 aaPredicted RBP21.89■■□□□ 1.09
PCDHA1-202ENST00000394633 MAP7D2Q96T17 732 aa21.89■■□□□ 1.09
PCDHA1-202ENST00000394633 TTC12Q9H892 705 aaPredicted RBP21.89■■□□□ 1.09
PCDHA1-202ENST00000394633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.09
PCDHA1-202ENST00000394633 TPCN1Q9ULQ1 816 aa21.89■■□□□ 1.09
PCDHA1-202ENST00000394633 HEG1Q9ULI3 1381 aa21.89■■□□□ 1.09
PCDHA1-202ENST00000394633 SHANK3Q9BYB0 1731 aa21.88■■□□□ 1.09
PCDHA1-202ENST00000394633 PRAMEF22A3QJZ6 481 aa21.88■■□□□ 1.09
PCDHA1-202ENST00000394633 SASH1O94885 1247 aa21.88■■□□□ 1.09
PCDHA1-202ENST00000394633 NMIQ13287 307 aaPredicted RBP21.88■■□□□ 1.09
PCDHA1-202ENST00000394633 KLHL34Q8N239 644 aa21.88■■□□□ 1.09
PCDHA1-202ENST00000394633 KAZALD1Q96I82 304 aa21.88■■□□□ 1.09
PCDHA1-202ENST00000394633 SUCLG2Q96I99 432 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms