RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 RASSF2P50749 326 aa15.29■□□□□ 0.04
USP49-203ENST00000394253 RAPGEF4Q8WZA2 1011 aa15.29■□□□□ 0.04
USP49-203ENST00000394253 GSTA5Q7RTV2 222 aa15.29■□□□□ 0.04
USP49-203ENST00000394253 JAKMIP1Q96N16 626 aaKnown RBP15.28■□□□□ 0.04
USP49-203ENST00000394253 GBP5Q96PP8 586 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 TSGA10Q9BZW7 698 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 MTRF1LQ9UGC7 380 aaKnown RBP15.28■□□□□ 0.04
USP49-203ENST00000394253 SDCCAG8Q86SQ7 713 aaPredicted RBP15.28■□□□□ 0.04
USP49-203ENST00000394253 BACH2Q9BYV9 841 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 PFDN4Q9NQP4 134 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 CALCOCO2Q13137 446 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 LRRC27Q9C0I9 530 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 VPS18Q9P253 973 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 MAP2K2P36507 400 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 SELENOSQ9BQE4 189 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 MAP3K21Q5TCX8 1036 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 GSDMBQ8TAX9 411 aa15.28■□□□□ 0.04
USP49-203ENST00000394253 POLA1P09884 1462 aaPredicted RBP15.28■□□□□ 0.04
USP49-203ENST00000394253 NBPF8Q3BBV2 869 aa15.27■□□□□ 0.04
USP49-203ENST00000394253 RNF10Q8N5U6 811 aaKnown RBP15.27■□□□□ 0.04
USP49-203ENST00000394253 MCUR1Q96AQ8 359 aa15.27■□□□□ 0.04
USP49-203ENST00000394253 CALML4Q96GE6 196 aa15.27■□□□□ 0.04
USP49-203ENST00000394253 NKIRAS1Q9NYS0 192 aa15.27■□□□□ 0.04
USP49-203ENST00000394253 PSME1Q06323 249 aa15.27■□□□□ 0.04
USP49-203ENST00000394253 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
USP49-203ENST00000394253 CCT6BQ92526 530 aa15.27■□□□□ 0.04
USP49-203ENST00000394253 THEGQ9P2T0 379 aa15.27■□□□□ 0.04
USP49-203ENST00000394253 RPGRIP1LQ68CZ1 1315 aa15.27■□□□□ 0.04
USP49-203ENST00000394253 LUC7L3O95232 432 aaKnown RBP15.27■□□□□ 0.04
USP49-203ENST00000394253 NAA16Q6N069 864 aaPredicted RBP15.27■□□□□ 0.04
USP49-203ENST00000394253 C8orf76Q96K31 380 aa15.27■□□□□ 0.04
USP49-203ENST00000394253 VIMP08670 466 aaKnown RBP15.27■□□□□ 0.03
USP49-203ENST00000394253 EIF2AQ9BY44 585 aaKnown RBP15.27■□□□□ 0.03
USP49-203ENST00000394253 TRAK1Q9UPV9 953 aa15.27■□□□□ 0.03
USP49-203ENST00000394253 CETN3O15182 167 aa15.26■□□□□ 0.03
USP49-203ENST00000394253 KRT13P13646 458 aa15.26■□□□□ 0.03
USP49-203ENST00000394253 GKAP1Q5VSY0 366 aaPredicted RBP15.26■□□□□ 0.03
USP49-203ENST00000394253 GPR161Q8N6U8 529 aaKnown RBP15.26■□□□□ 0.03
USP49-203ENST00000394253 XAB2Q9HCS7 855 aaKnown RBP15.26■□□□□ 0.03
USP49-203ENST00000394253 RMND1Q9NWS8 449 aa15.26■□□□□ 0.03
USP49-203ENST00000394253 CRCPO75575 148 aa15.26■□□□□ 0.03
USP49-203ENST00000394253 GABPB2Q8TAK5 448 aaPredicted RBP15.26■□□□□ 0.03
USP49-203ENST00000394253 CACYBPQ9HB71 228 aaKnown RBP15.26■□□□□ 0.03
USP49-203ENST00000394253 PDCD2Q16342 344 aaPredicted RBP15.26■□□□□ 0.03
USP49-203ENST00000394253 HAUS8Q9BT25 410 aa15.26■□□□□ 0.03
USP49-203ENST00000394253 TCP11L1Q9NUJ3 509 aa15.26■□□□□ 0.03
USP49-203ENST00000394253 MPHOSPH8Q99549 860 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 KRT86O43790 486 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 INPP1P49441 399 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 COG7P83436 770 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 LRSAM1Q6UWE0 723 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 CUL5Q93034 780 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 MYO1BO43795 1136 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 GIGYF1O75420 1035 aaPredicted RBP15.25■□□□□ 0.03
USP49-203ENST00000394253 CCDC40Q4G0X9 1142 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 SYCP3Q8IZU3 236 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 Q9H521 79 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 GEN1Q17RS7 908 aa15.25■□□□□ 0.03
USP49-203ENST00000394253 MYCBPQ99417 103 aaPredicted RBP15.25■□□□□ 0.03
USP49-203ENST00000394253 USP5P45974 858 aa15.24■□□□□ 0.03
USP49-203ENST00000394253 PDCD7Q8N8D1 485 aaKnown RBP15.24■□□□□ 0.03
USP49-203ENST00000394253 DACT3Q96B18 629 aaPredicted RBP15.24■□□□□ 0.03
USP49-203ENST00000394253 SMAP1Q8IYB5 467 aaPredicted RBP15.24■□□□□ 0.03
USP49-203ENST00000394253 SLC4A8Q2Y0W8 1093 aa15.24■□□□□ 0.03
USP49-203ENST00000394253 INPP5BP32019 993 aa15.24■□□□□ 0.03
USP49-203ENST00000394253 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
USP49-203ENST00000394253 TCERG1LQ5VWI1 586 aa15.24■□□□□ 0.03
USP49-203ENST00000394253 BICD1Q96G01 975 aa15.24■□□□□ 0.03
USP49-203ENST00000394253 ATAD2Q6PL18 1390 aa15.24■□□□□ 0.03
USP49-203ENST00000394253 UBE2HP62256 183 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 CLUL1Q15846 466 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 SPTY2D1Q68D10 685 aaPredicted RBP15.23■□□□□ 0.03
USP49-203ENST00000394253 CAPZA3Q96KX2 299 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 OGFRQ9NZT2 677 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 PUF60Q9UHX1 559 aaKnown RBP15.23■□□□□ 0.03
USP49-203ENST00000394253 CHD1LQ86WJ1 897 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 AKR1B10O60218 316 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 CCDC89Q8N998 374 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 GAS2L2Q8NHY3 880 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 HDAC9Q9UKV0 1011 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 PDZRN3Q9UPQ7 1066 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 GCKP35557 465 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 GIPC1O14908 333 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 FCHSD2O94868 740 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 BAG4O95429 457 aaKnown RBP15.23■□□□□ 0.03
USP49-203ENST00000394253 HSPA1LP34931 641 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 ATP6V1E1P36543 226 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 KRBA2Q6ZNG9 492 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 PFDN1O60925 122 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 EFCAB2Q5VUJ9 269 aa15.23■□□□□ 0.03
USP49-203ENST00000394253 KRT83P78385 493 aa15.22■□□□□ 0.03
USP49-203ENST00000394253 ARHGEF2Q92974 986 aaKnown RBP15.22■□□□□ 0.03
USP49-203ENST00000394253 UTP14AQ9BVJ6 771 aaKnown RBP15.22■□□□□ 0.03
USP49-203ENST00000394253 RBM5P52756 815 aaKnown RBP eCLIP15.22■□□□□ 0.03
USP49-203ENST00000394253 CWC27Q6UX04 472 aaKnown RBP15.22■□□□□ 0.03
USP49-203ENST00000394253 FAN1Q9Y2M0 1017 aa15.22■□□□□ 0.03
USP49-203ENST00000394253 WDHD1O75717 1129 aaPredicted RBP15.22■□□□□ 0.03
USP49-203ENST00000394253 ZNF165P49910 485 aa15.22■□□□□ 0.03
USP49-203ENST00000394253 PPFIA1Q13136 1202 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms