RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 FAM200AQ8TCP9 573 aa7.58□□□□□ -1.2
NPM1-203ENST00000393820 KCTD15Q96SI1 283 aaPredicted RBP7.58□□□□□ -1.2
NPM1-203ENST00000393820 CHIC2Q9UKJ5 165 aa7.58□□□□□ -1.2
NPM1-203ENST00000393820 UGGT1Q9NYU2 1555 aa7.58□□□□□ -1.2
NPM1-203ENST00000393820 MAST1Q9Y2H9 1570 aa7.58□□□□□ -1.2
NPM1-203ENST00000393820 POLR1AO95602 1720 aaPredicted RBP7.58□□□□□ -1.2
NPM1-203ENST00000393820 TONSLQ96HA7 1378 aa7.57□□□□□ -1.2
NPM1-203ENST00000393820 ZC3H13Q5T200 1668 aaKnown RBP7.57□□□□□ -1.2
NPM1-203ENST00000393820 ATP2B4P23634 1241 aa7.57□□□□□ -1.2
NPM1-203ENST00000393820 SWI5Q1ZZU3 235 aa7.57□□□□□ -1.2
NPM1-203ENST00000393820 RNF135Q8IUD6 432 aa7.57□□□□□ -1.2
NPM1-203ENST00000393820 ANKMY2Q8IV38 441 aa7.57□□□□□ -1.2
NPM1-203ENST00000393820 CDCA7Q9BWT1 371 aaPredicted RBP7.57□□□□□ -1.2
NPM1-203ENST00000393820 KIAA1522Q9P206 1035 aaPredicted RBP7.57□□□□□ -1.2
NPM1-203ENST00000393820 RNF17Q9BXT8 1623 aaKnown RBP7.56□□□□□ -1.2
NPM1-203ENST00000393820 EIF2AK4Q9P2K8 1649 aaKnown RBP7.56□□□□□ -1.2
NPM1-203ENST00000393820 FANCIQ9NVI1 1328 aa7.56□□□□□ -1.2
NPM1-203ENST00000393820 MYOM3Q5VTT5 1437 aa7.56□□□□□ -1.2
NPM1-203ENST00000393820 LZTS3O60299 673 aaPredicted RBP7.56□□□□□ -1.2
NPM1-203ENST00000393820 FSHRP23945 695 aa7.56□□□□□ -1.2
NPM1-203ENST00000393820 MRPL14Q6P1L8 145 aaKnown RBP7.56□□□□□ -1.2
NPM1-203ENST00000393820 ZNF592Q92610 1267 aa7.56□□□□□ -1.2
NPM1-203ENST00000393820 CDK15Q96Q40 435 aa7.56□□□□□ -1.2
NPM1-203ENST00000393820 NEURL4Q96JN8 1562 aa7.56□□□□□ -1.2
NPM1-203ENST00000393820 HFM1A2PYH4 1435 aa7.55□□□□□ -1.2
NPM1-203ENST00000393820 NPHP4O75161 1426 aaPredicted RBP7.55□□□□□ -1.2
NPM1-203ENST00000393820 ARHGAP31Q2M1Z3 1444 aa7.55□□□□□ -1.2
NPM1-203ENST00000393820 NR3C2P08235 984 aa7.55□□□□□ -1.2
NPM1-203ENST00000393820 FGD6Q6ZV73 1430 aa7.55□□□□□ -1.2
NPM1-203ENST00000393820 IGHA1P01876 353 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 CLDN10P78369 228 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 DPYDQ12882 1025 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 INTS6LQ5JSJ4 861 aaKnown RBP7.54□□□□□ -1.2
NPM1-203ENST00000393820 OGFOD1Q8N543 542 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 TRIM52Q96A61 297 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 ABCC3O15438 1527 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 DUOX2Q9NRD8 1548 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 ADH1CP00326 375 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 MCCD1P59942 119 aaPredicted RBP7.54□□□□□ -1.2
NPM1-203ENST00000393820 C1orf216Q8TAB5 229 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 CCDC85AQ96PX6 553 aaPredicted RBP7.54□□□□□ -1.2
NPM1-203ENST00000393820 PURBQ96QR8 312 aaKnown RBP7.54□□□□□ -1.2
NPM1-203ENST00000393820 TMPRSS4Q9NRS4 437 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 VWDEQ8N2E2 1590 aa7.54□□□□□ -1.2
NPM1-203ENST00000393820 ERVK-7P63135 1459 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 SOBPA7XYQ1 873 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 ESPNB1AK53 854 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 ERVH48-1M5A8F1 160 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 ZNF16P17020 682 aaPredicted RBP7.53□□□□□ -1.2
NPM1-203ENST00000393820 HSPA1LP34931 641 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 SCNN1AP37088 669 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 EML3Q32P44 896 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 NBPF20Q3BBV1 942 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 MAP7D1Q3KQU3 841 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 MRRFQ96E11 262 aaKnown RBP7.53□□□□□ -1.2
NPM1-203ENST00000393820 ZNF594Q96JF6 807 aaPredicted RBP7.53□□□□□ -1.2
NPM1-203ENST00000393820 ADAMTS8Q9UP79 889 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 MAP4K5Q9Y4K4 846 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 EID1Q9Y6B2 187 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 ERBINQ96RT1 1412 aa7.53□□□□□ -1.2
NPM1-203ENST00000393820 IQGAP1P46940 1657 aa7.52□□□□□ -1.2
NPM1-203ENST00000393820 MARSP56192 900 aaKnown RBP7.52□□□□□ -1.21
NPM1-203ENST00000393820 PIP4K2BP78356 416 aa7.52□□□□□ -1.21
NPM1-203ENST00000393820 GPAT2Q6NUI2 795 aa7.52□□□□□ -1.21
NPM1-203ENST00000393820 SIRT1Q96EB6 747 aa7.52□□□□□ -1.21
NPM1-203ENST00000393820 SYNMO15061 1565 aa7.52□□□□□ -1.21
NPM1-203ENST00000393820 KANK1Q14678 1352 aa7.51□□□□□ -1.21
NPM1-203ENST00000393820 DKK1O94907 266 aa7.51□□□□□ -1.21
NPM1-203ENST00000393820 NNTQ13423 1086 aa7.51□□□□□ -1.21
NPM1-203ENST00000393820 MPNDQ8N594 471 aa7.51□□□□□ -1.21
NPM1-203ENST00000393820 BCL2L13Q9BXK5 485 aa7.51□□□□□ -1.21
NPM1-203ENST00000393820 BCL11AQ9H165 835 aa7.51□□□□□ -1.21
NPM1-203ENST00000393820 DNMT3AQ9Y6K1 912 aaPredicted RBP7.51□□□□□ -1.21
NPM1-203ENST00000393820 SCAF11Q99590 1463 aaKnown RBP7.51□□□□□ -1.21
NPM1-203ENST00000393820 ARHGAP23Q9P227 1491 aa7.51□□□□□ -1.21
NPM1-203ENST00000393820 SLIT1O75093 1534 aa7.51□□□□□ -1.21
NPM1-203ENST00000393820 MAN1A2O60476 641 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 PPFIA3O75145 1194 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 OCLNQ16625 522 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 XP32Q5T750 250 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 TRIM50Q86XT4 487 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 NPAS4Q8IUM7 802 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 SIX5Q8N196 739 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 HIRIP3Q9BW71 556 aaPredicted RBP7.5□□□□□ -1.21
NPM1-203ENST00000393820 DNAAF2Q9NVR5 837 aaKnown RBP7.5□□□□□ -1.21
NPM1-203ENST00000393820 PPP4R2Q9NY27 417 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 CDV3Q9UKY7 258 aaKnown RBP7.5□□□□□ -1.21
NPM1-203ENST00000393820 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 PCDHB11Q9Y5F2 797 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 NAIPQ13075 1403 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 KDM5AP29375 1690 aaKnown RBP7.5□□□□□ -1.21
NPM1-203ENST00000393820 PRDM15P57071 1507 aaPredicted RBP7.5□□□□□ -1.21
NPM1-203ENST00000393820 LRRC7Q96NW7 1537 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 KIF15Q9NS87 1388 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 ATP1A2P50993 1020 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 NR5A1Q13285 461 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 PPP1R26Q5T8A7 1209 aaPredicted RBP7.5□□□□□ -1.21
NPM1-203ENST00000393820 LARGE2Q8N3Y3 721 aa7.5□□□□□ -1.21
NPM1-203ENST00000393820 MROH1Q8NDA8 1641 aa7.49□□□□□ -1.21
NPM1-203ENST00000393820 SCTRP47872 440 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms