RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 CWC25Q9NXE8 425 aaPredicted RBP17.29■□□□□ 0.36
MKS1-203ENST00000393120 A1BGP04217 495 aa17.29■□□□□ 0.36
MKS1-203ENST00000393120 TTLL7Q6ZT98 887 aa17.29■□□□□ 0.36
MKS1-203ENST00000393120 KLHDC4Q8TBB5 520 aa17.29■□□□□ 0.36
MKS1-203ENST00000393120 TMOD3Q9NYL9 352 aa17.29■□□□□ 0.36
MKS1-203ENST00000393120 ISY1Q9ULR0 285 aaKnown RBP17.29■□□□□ 0.36
MKS1-203ENST00000393120 SNX14Q9Y5W7 946 aa17.29■□□□□ 0.36
MKS1-203ENST00000393120 FOXO4P98177 505 aa17.28■□□□□ 0.36
MKS1-203ENST00000393120 ATP5JP18859 108 aa17.27■□□□□ 0.36
MKS1-203ENST00000393120 TNNI3KQ59H18 835 aa17.27■□□□□ 0.35
MKS1-203ENST00000393120 TTC14Q96N46 770 aa17.27■□□□□ 0.35
MKS1-203ENST00000393120 BTG4Q9NY30 223 aa17.27■□□□□ 0.35
MKS1-203ENST00000393120 TLR7Q9NYK1 1049 aaKnown RBP17.27■□□□□ 0.35
MKS1-203ENST00000393120 FPGT-TNNI3KV9GXZ4 949 aa17.27■□□□□ 0.35
MKS1-203ENST00000393120 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
MKS1-203ENST00000393120 JARID2Q92833 1246 aaPredicted RBP17.26■□□□□ 0.35
MKS1-203ENST00000393120 UPF3BQ9BZI7 483 aaKnown RBP17.26■□□□□ 0.35
MKS1-203ENST00000393120 TM6SF1Q9BZW5 370 aa17.26■□□□□ 0.35
MKS1-203ENST00000393120 ZDHHC9Q9Y397 364 aa17.26■□□□□ 0.35
MKS1-203ENST00000393120 DISP2A7MBM2 1401 aa17.26■□□□□ 0.35
MKS1-203ENST00000393120 NUP188Q5SRE5 1749 aa17.26■□□□□ 0.35
MKS1-203ENST00000393120 TFCP2Q12800 502 aa17.25■□□□□ 0.35
MKS1-203ENST00000393120 TRIM28Q13263 835 aaKnown RBP17.25■□□□□ 0.35
MKS1-203ENST00000393120 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
MKS1-203ENST00000393120 RASEFQ8IZ41 740 aa17.25■□□□□ 0.35
MKS1-203ENST00000393120 ATG3Q9NT62 314 aa17.25■□□□□ 0.35
MKS1-203ENST00000393120 GOLGA6L3A6NEY3 463 aa17.25■□□□□ 0.35
MKS1-203ENST00000393120 BOLA2Q9H3K6 86 aa17.25■□□□□ 0.35
MKS1-203ENST00000393120 GPR108Q9NPR9 543 aa17.25■□□□□ 0.35
MKS1-203ENST00000393120 PTH1RQ03431 593 aa17.24■□□□□ 0.35
MKS1-203ENST00000393120 PKP1Q13835 747 aa17.24■□□□□ 0.35
MKS1-203ENST00000393120 NECTIN1Q15223 517 aa17.24■□□□□ 0.35
MKS1-203ENST00000393120 TICAM2Q86XR7 235 aa17.24■□□□□ 0.35
MKS1-203ENST00000393120 PIGBQ92521 554 aa17.24■□□□□ 0.35
MKS1-203ENST00000393120 MAP4K1Q92918 833 aa17.24■□□□□ 0.35
MKS1-203ENST00000393120 ISCA1Q9BUE6 129 aa17.24■□□□□ 0.35
MKS1-203ENST00000393120 GZF1Q9H116 711 aaPredicted RBP17.24■□□□□ 0.35
MKS1-203ENST00000393120 DBNLQ9UJU6 430 aaKnown RBP17.24■□□□□ 0.35
MKS1-203ENST00000393120 CCDC171Q6TFL3 1326 aa17.24■□□□□ 0.35
MKS1-203ENST00000393120 RFX7Q2KHR2 1363 aa17.24■□□□□ 0.35
MKS1-203ENST00000393120 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
MKS1-203ENST00000393120 COL14A1Q05707 1796 aaKnown RBP17.24■□□□□ 0.35
MKS1-203ENST00000393120 NMIQ13287 307 aaPredicted RBP17.23■□□□□ 0.35
MKS1-203ENST00000393120 TCIRG1Q13488 830 aa17.23■□□□□ 0.35
MKS1-203ENST00000393120 KLHL40Q2TBA0 621 aa17.23■□□□□ 0.35
MKS1-203ENST00000393120 BRD1O95696 1058 aa17.22■□□□□ 0.35
MKS1-203ENST00000393120 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
MKS1-203ENST00000393120 ZBTB3Q9H5J0 574 aa17.22■□□□□ 0.35
MKS1-203ENST00000393120 CIAO1O76071 339 aa17.21■□□□□ 0.35
MKS1-203ENST00000393120 STARD3NLO95772 234 aa17.21■□□□□ 0.35
MKS1-203ENST00000393120 IL15P40933 162 aaPredicted RBP17.21■□□□□ 0.35
MKS1-203ENST00000393120 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.35
MKS1-203ENST00000393120 FAM227BQ96M60 508 aa17.21■□□□□ 0.35
MKS1-203ENST00000393120 ZSWIM6Q9HCJ5 1215 aa17.21■□□□□ 0.35
MKS1-203ENST00000393120 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
MKS1-203ENST00000393120 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
MKS1-203ENST00000393120 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
MKS1-203ENST00000393120 COL22A1Q8NFW1 1626 aaPredicted RBP17.21■□□□□ 0.35
MKS1-203ENST00000393120 MED23Q9ULK4 1368 aa17.21■□□□□ 0.35
MKS1-203ENST00000393120 ZKSCAN1P17029 563 aaPredicted RBP17.21■□□□□ 0.35
MKS1-203ENST00000393120 VPS53Q5VIR6 699 aa17.21■□□□□ 0.35
MKS1-203ENST00000393120 HAUS7Q99871 368 aa17.21■□□□□ 0.35
MKS1-203ENST00000393120 JCADQ9P266 1359 aa17.2■□□□□ 0.34
MKS1-203ENST00000393120 LRP6O75581 1613 aa17.2■□□□□ 0.34
MKS1-203ENST00000393120 LMBRD1Q9NUN5 540 aa17.2■□□□□ 0.34
MKS1-203ENST00000393120 BRPF3Q9ULD4 1205 aa17.2■□□□□ 0.34
MKS1-203ENST00000393120 TJP1Q07157 1748 aa17.2■□□□□ 0.34
MKS1-203ENST00000393120 AK2P54819 239 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 MCTP1Q6DN14 999 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 PRPF40BQ6NWY9 871 aaKnown RBP17.19■□□□□ 0.34
MKS1-203ENST00000393120 DNAJC10Q8IXB1 793 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 FBXO3Q9UK99 471 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 RBM8AQ9Y5S9 174 aaKnown RBP17.19■□□□□ 0.34
MKS1-203ENST00000393120 BCL9O00512 1426 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 A0A0D9SFI3 127 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 MRE11P49959 708 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 TSGA10IPQ3SY00 556 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 CREB3L3Q68CJ9 461 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 RUFY3Q7L099 469 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 DBNDD2Q9BQY9 259 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 PLA2G12BQ9BX93 195 aa17.19■□□□□ 0.34
MKS1-203ENST00000393120 EYA2O00167 538 aa17.18■□□□□ 0.34
MKS1-203ENST00000393120 XRCC6P12956 609 aaKnown RBP eCLIP17.18■□□□□ 0.34
MKS1-203ENST00000393120 CASTP20810 708 aaKnown RBP17.18■□□□□ 0.34
MKS1-203ENST00000393120 KIF6Q6ZMV9 814 aa17.18■□□□□ 0.34
MKS1-203ENST00000393120 ZSCAN31Q96LW9 406 aaPredicted RBP17.18■□□□□ 0.34
MKS1-203ENST00000393120 CYP46A1Q9Y6A2 500 aa17.18■□□□□ 0.34
MKS1-203ENST00000393120 EXOC5O00471 708 aa17.17■□□□□ 0.34
MKS1-203ENST00000393120 PCCAP05165 728 aaPredicted RBP17.17■□□□□ 0.34
MKS1-203ENST00000393120 PSMA5P28066 241 aa17.17■□□□□ 0.34
MKS1-203ENST00000393120 RNF20Q5VTR2 975 aa17.17■□□□□ 0.34
MKS1-203ENST00000393120 CDCA7Q9BWT1 371 aaPredicted RBP17.17■□□□□ 0.34
MKS1-203ENST00000393120 CHMP3Q9Y3E7 222 aa17.17■□□□□ 0.34
MKS1-203ENST00000393120 DDX49Q9Y6V7 483 aaKnown RBP17.17■□□□□ 0.34
MKS1-203ENST00000393120 PLCH1Q4KWH8 1693 aa17.17■□□□□ 0.34
MKS1-203ENST00000393120 ADCK5Q3MIX3 580 aa17.17■□□□□ 0.34
MKS1-203ENST00000393120 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
MKS1-203ENST00000393120 NOL8Q76FK4 1167 aaKnown RBP17.17■□□□□ 0.34
MKS1-203ENST00000393120 JAKMIP1Q96N16 626 aaKnown RBP17.17■□□□□ 0.34
MKS1-203ENST00000393120 ALDH8A1Q9H2A2 487 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms