RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 GJB2P29033 226 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 HOXC9P31274 260 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 IP6K1Q92551 441 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 EYA1Q99502 592 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 NLRP6P59044 892 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 CDC37L1Q7L3B6 337 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 TSPYL4Q9UJ04 414 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 MAP3K5Q99683 1374 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 ROBO1Q9Y6N7 1651 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 KRT28Q7Z3Y7 464 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 PPP1R42Q7Z4L9 355 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 ABTB2Q8N961 1025 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 JCADQ9P266 1359 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
PDCD4-202ENST00000393104 SPC24Q8NBT2 197 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 RHPN1Q8TCX5 695 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 SNRKQ9NRH2 765 aa13.67□□□□□ -0.22
PDCD4-202ENST00000393104 PLCH1Q4KWH8 1693 aa13.66□□□□□ -0.22
PDCD4-202ENST00000393104 SLFN14P0C7P3 912 aa13.66□□□□□ -0.22
PDCD4-202ENST00000393104 SPATA31A3Q5VYP0 1347 aa13.66□□□□□ -0.22
PDCD4-202ENST00000393104 USP27XA6NNY8 438 aa13.66□□□□□ -0.22
PDCD4-202ENST00000393104 C14orf37Q86TY3 774 aa13.66□□□□□ -0.22
PDCD4-202ENST00000393104 PGBD1Q96JS3 809 aa13.66□□□□□ -0.22
PDCD4-202ENST00000393104 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
PDCD4-202ENST00000393104 WNK3Q9BYP7 1800 aa13.65□□□□□ -0.22
PDCD4-202ENST00000393104 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
PDCD4-202ENST00000393104 ARID5BQ14865 1188 aa13.65□□□□□ -0.22
PDCD4-202ENST00000393104 PDCL2Q8N4E4 241 aa13.65□□□□□ -0.22
PDCD4-202ENST00000393104 NECTIN2Q92692 538 aa13.65□□□□□ -0.22
PDCD4-202ENST00000393104 CBX8Q9HC52 389 aa13.65□□□□□ -0.22
PDCD4-202ENST00000393104 TPRNQ4KMQ1 711 aa13.65□□□□□ -0.22
PDCD4-202ENST00000393104 ARHGEF25Q86VW2 580 aa13.65□□□□□ -0.22
PDCD4-202ENST00000393104 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
PDCD4-202ENST00000393104 CASTP20810 708 aaKnown RBP13.65□□□□□ -0.23
PDCD4-202ENST00000393104 DDX54Q8TDD1 881 aaKnown RBP13.65□□□□□ -0.23
PDCD4-202ENST00000393104 CACTINQ8WUQ7 758 aaKnown RBP13.65□□□□□ -0.23
PDCD4-202ENST00000393104 ELP1O95163 1332 aa13.64□□□□□ -0.23
PDCD4-202ENST00000393104 HTATSF1O43719 755 aaKnown RBP13.64□□□□□ -0.23
PDCD4-202ENST00000393104 VPS53Q5VIR6 699 aa13.64□□□□□ -0.23
PDCD4-202ENST00000393104 ZSCAN25Q6NSZ9 544 aa13.64□□□□□ -0.23
PDCD4-202ENST00000393104 KIF20AO95235 890 aa13.64□□□□□ -0.23
PDCD4-202ENST00000393104 GNAI3P08754 354 aa13.64□□□□□ -0.23
PDCD4-202ENST00000393104 MCCP23508 829 aa13.64□□□□□ -0.23
PDCD4-202ENST00000393104 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
PDCD4-202ENST00000393104 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
PDCD4-202ENST00000393104 TYRO3Q06418 890 aa13.63□□□□□ -0.23
PDCD4-202ENST00000393104 BRINP3Q76B58 766 aa13.63□□□□□ -0.23
PDCD4-202ENST00000393104 DDX41Q9UJV9 622 aaKnown RBP13.63□□□□□ -0.23
PDCD4-202ENST00000393104 COL14A1Q05707 1796 aaKnown RBP13.63□□□□□ -0.23
PDCD4-202ENST00000393104 TOB2Q14106 344 aaPredicted RBP13.63□□□□□ -0.23
PDCD4-202ENST00000393104 BEND3Q5T5X7 828 aa13.63□□□□□ -0.23
PDCD4-202ENST00000393104 CEMIPQ8WUJ3 1361 aa13.63□□□□□ -0.23
PDCD4-202ENST00000393104 ADD1P35611 737 aaKnown RBP13.63□□□□□ -0.23
PDCD4-202ENST00000393104 DNTTIP2Q5QJE6 756 aaKnown RBP13.63□□□□□ -0.23
PDCD4-202ENST00000393104 FAM200AQ8TCP9 573 aa13.63□□□□□ -0.23
PDCD4-202ENST00000393104 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
PDCD4-202ENST00000393104 TM6SF1Q9BZW5 370 aa13.63□□□□□ -0.23
PDCD4-202ENST00000393104 COL16A1Q07092 1604 aaPredicted RBP13.63□□□□□ -0.23
PDCD4-202ENST00000393104 IQCB1Q15051 598 aa13.62□□□□□ -0.23
PDCD4-202ENST00000393104 SYCP1Q15431 976 aa13.62□□□□□ -0.23
PDCD4-202ENST00000393104 CAMK4Q16566 473 aa13.62□□□□□ -0.23
PDCD4-202ENST00000393104 CCDC186Q7Z3E2 898 aa13.62□□□□□ -0.23
PDCD4-202ENST00000393104 ZNF446Q9NWS9 450 aa13.62□□□□□ -0.23
PDCD4-202ENST00000393104 MRC1P22897 1456 aa13.62□□□□□ -0.23
PDCD4-202ENST00000393104 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
PDCD4-202ENST00000393104 NYAP1Q6ZVC0 841 aa13.62□□□□□ -0.23
PDCD4-202ENST00000393104 MORC2Q9Y6X9 1032 aaPredicted RBP13.62□□□□□ -0.23
PDCD4-202ENST00000393104 ZNF75DP51815 510 aa13.62□□□□□ -0.23
PDCD4-202ENST00000393104 TDRD7Q8NHU6 1098 aaKnown RBP13.62□□□□□ -0.23
PDCD4-202ENST00000393104 NEDD4P46934 1319 aa13.61□□□□□ -0.23
PDCD4-202ENST00000393104 NR1I2O75469 434 aa13.61□□□□□ -0.23
PDCD4-202ENST00000393104 USP16Q9Y5T5 823 aa13.61□□□□□ -0.23
PDCD4-202ENST00000393104 CCDC171Q6TFL3 1326 aa13.61□□□□□ -0.23
PDCD4-202ENST00000393104 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
PDCD4-202ENST00000393104 RBM6P78332 1123 aaKnown RBP13.61□□□□□ -0.23
PDCD4-202ENST00000393104 SCN11AQ9UI33 1791 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 KMT5BQ4FZB7 885 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 MAP4K1Q92918 833 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 PODXL2Q9NZ53 605 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 FANCGO15287 622 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 RAB11FIP3O75154 756 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 GCP02774 474 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 MTX1Q13505 466 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 ANO6Q4KMQ2 910 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 KIF18AQ8NI77 898 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 FAM227BQ96M60 508 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 DDX60Q8IY21 1712 aaKnown RBP13.6□□□□□ -0.23
PDCD4-202ENST00000393104 AMPHP49418 695 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
PDCD4-202ENST00000393104 CKAP2LQ8IYA6 745 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 LRRN4CLQ8ND94 238 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 TMEM51Q9NW97 253 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 BABAM1Q9NWV8 329 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 SMC3Q9UQE7 1217 aa13.6□□□□□ -0.23
PDCD4-202ENST00000393104 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.6□□□□□ -0.23
PDCD4-202ENST00000393104 DACT1Q9NYF0 836 aa13.59□□□□□ -0.23
PDCD4-202ENST00000393104 SLAIN2Q9P270 581 aa13.59□□□□□ -0.23
PDCD4-202ENST00000393104 MED23Q9ULK4 1368 aa13.59□□□□□ -0.23
PDCD4-202ENST00000393104 SURF6O75683 361 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms