RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CCDC12Q8WUD4 166 aaPredicted RBP15.13■□□□□ 0.01
LCA5-202ENST00000392959 POTEJP0CG39 1038 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
LCA5-202ENST00000392959 ANO6Q4KMQ2 910 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 SPECC1Q5M775 1068 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 DACT1Q9NYF0 836 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 AMOTL2Q9Y2J4 779 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 PARD3Q8TEW0 1356 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 ANXA1P04083 346 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 ZHX1Q9UKY1 873 aaPredicted RBP15.12■□□□□ 0.01
LCA5-202ENST00000392959 NUTM2BA6NNL0 878 aaPredicted RBP15.12■□□□□ 0.01
LCA5-202ENST00000392959 NUTM2EB1AL46 878 aaPredicted RBP15.12■□□□□ 0.01
LCA5-202ENST00000392959 ATP5J2-PTCD1G3V325 749 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 UBA7P41226 1012 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 SYKP43405 635 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 PRIM1P49642 420 aaKnown RBP15.12■□□□□ 0.01
LCA5-202ENST00000392959 TTF1Q15361 905 aaPredicted RBP15.12■□□□□ 0.01
LCA5-202ENST00000392959 CCDC178Q5BJE1 867 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 NUTM2AQ8IVF1 878 aaPredicted RBP15.12■□□□□ 0.01
LCA5-202ENST00000392959 SMC5Q8IY18 1101 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 UBA5Q9GZZ9 404 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 FAM107BQ9H098 131 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 ZSWIM4Q9H7M6 989 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 TCP11L1Q9NUJ3 509 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 CCDC144CPQ8IYA2 1237 aa15.12■□□□□ 0.01
LCA5-202ENST00000392959 NAA15Q9BXJ9 866 aaKnown RBP15.12■□□□□ 0.01
LCA5-202ENST00000392959 RBM8AQ9Y5S9 174 aaKnown RBP15.12■□□□□ 0.01
LCA5-202ENST00000392959 IDEP14735 1019 aa15.11■□□□□ 0.01
LCA5-202ENST00000392959 RAB3GAP1Q15042 981 aa15.11■□□□□ 0.01
LCA5-202ENST00000392959 FBXO31Q5XUX0 539 aaPredicted RBP15.11■□□□□ 0.01
LCA5-202ENST00000392959 RAB11FIP4Q86YS3 637 aa15.11■□□□□ 0.01
LCA5-202ENST00000392959 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
LCA5-202ENST00000392959 MPHOSPH10O00566 681 aaKnown RBP15.11■□□□□ 0.01
LCA5-202ENST00000392959 HLTFQ14527 1009 aaKnown RBP eCLIP15.11■□□□□ 0.01
LCA5-202ENST00000392959 ALS2CR12Q96Q35 445 aa15.11■□□□□ 0.01
LCA5-202ENST00000392959 TTC12Q9H892 705 aaPredicted RBP15.11■□□□□ 0.01
LCA5-202ENST00000392959 N4BP3O15049 544 aa15.11■□□□□ 0.01
LCA5-202ENST00000392959 FBLN1P23142 703 aa15.11■□□□□ 0.01
LCA5-202ENST00000392959 UBASH3AP57075 661 aa15.11■□□□□ 0.01
LCA5-202ENST00000392959 DDX46Q7L014 1031 aaKnown RBP15.11■□□□□ 0.01
LCA5-202ENST00000392959 PYM1Q9BRP8 204 aaKnown RBP15.11■□□□□ 0.01
LCA5-202ENST00000392959 F13A1P00488 732 aa15.11■□□□□ 0.01
LCA5-202ENST00000392959 KRT222Q8N1A0 295 aa15.11■□□□□ 0.01
LCA5-202ENST00000392959 MRPL50Q8N5N7 158 aaKnown RBP15.11■□□□□ 0.01
LCA5-202ENST00000392959 DESP17661 470 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 SLC26A6Q9BXS9 759 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 KLF18A0A0U1RQI7 1052 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 RLBP1P12271 317 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 KCNG4Q8TDN1 519 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 CWC25Q9NXE8 425 aaPredicted RBP15.1■□□□□ 0.01
LCA5-202ENST00000392959 ADGRL1O94910 1474 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 GSTTP1A0A1W2PQM5 241 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 LMAN1P49257 510 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 ATP8B2P98198 1209 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 AMPD3Q01432 767 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 DNM1Q05193 864 aaKnown RBP15.1■□□□□ 0.01
LCA5-202ENST00000392959 C16orf71Q8IYS4 520 aaPredicted RBP15.1■□□□□ 0.01
LCA5-202ENST00000392959 C8orf58Q8NAV2 365 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 GIMAP7Q8NHV1 300 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 MRPS27Q92552 414 aaKnown RBP15.1■□□□□ 0.01
LCA5-202ENST00000392959 TMOD2Q9NZR1 351 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 KIF14Q15058 1648 aa15.1■□□□□ 0.01
LCA5-202ENST00000392959 RBM25P49756 843 aaKnown RBP15.09■□□□□ 0.01
LCA5-202ENST00000392959 CTR9Q6PD62 1173 aa15.09■□□□□ 0.01
LCA5-202ENST00000392959 MICALCLQ6ZW33 695 aa15.09■□□□□ 0.01
LCA5-202ENST00000392959 GPTP24298 496 aa15.09■□□□□ 0.01
LCA5-202ENST00000392959 HS1BP3Q53T59 392 aa15.09■□□□□ 0.01
LCA5-202ENST00000392959 MFSD6Q6ZSS7 791 aa15.09■□□□□ 0.01
LCA5-202ENST00000392959 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.09■□□□□ 0.01
LCA5-202ENST00000392959 TNNQ9UQP3 1299 aa15.09■□□□□ 0.01
LCA5-202ENST00000392959 MATR3P43243 847 aaKnown RBP eCLIP15.09■□□□□ 0.01
LCA5-202ENST00000392959 CRACR2BQ8N4Y2 399 aaPredicted RBP15.09■□□□□ 0.01
LCA5-202ENST00000392959 CD109Q6YHK3 1445 aa15.09■□□□□ 0.01
LCA5-202ENST00000392959 LRRC2Q9BYS8 371 aa15.09■□□□□ 0.01
LCA5-202ENST00000392959 DCTPP1Q9H773 170 aa15.09■□□□□ 0.01
LCA5-202ENST00000392959 ASXL1Q8IXJ9 1541 aa15.09■□□□□ 0.01
LCA5-202ENST00000392959 KIF5BP33176 963 aa15.08■□□□□ 0.01
LCA5-202ENST00000392959 CALML4Q96GE6 196 aa15.08■□□□□ 0.01
LCA5-202ENST00000392959 DNAJC25Q9H1X3 360 aa15.08■□□□□ 0.01
LCA5-202ENST00000392959 DNAI1Q9UI46 699 aa15.08■□□□□ 0.01
LCA5-202ENST00000392959 MAPKBP1O60336 1514 aa15.08■□□□□ 0
LCA5-202ENST00000392959 CCDC40Q4G0X9 1142 aa15.08■□□□□ 0
LCA5-202ENST00000392959 RNF187Q5TA31 235 aaPredicted RBP15.08■□□□□ 0
LCA5-202ENST00000392959 BCCIPQ9P287 314 aaKnown RBP eCLIP15.08■□□□□ 0
LCA5-202ENST00000392959 TNIP1Q15025 636 aa15.08■□□□□ 0
LCA5-202ENST00000392959 ANKRD13DQ6ZTN6 518 aa15.08■□□□□ 0
LCA5-202ENST00000392959 FAM114A1Q8IWE2 563 aa15.08■□□□□ 0
LCA5-202ENST00000392959 IFNL2Q8IZJ0 200 aa15.08■□□□□ 0
LCA5-202ENST00000392959 ARFGAP3Q9NP61 516 aa15.08■□□□□ 0
LCA5-202ENST00000392959 JADE2Q9NQC1 790 aa15.08■□□□□ 0
LCA5-202ENST00000392959 TMCO5BA8MYB1 307 aa15.07■□□□□ 0
LCA5-202ENST00000392959 CCDC96Q2M329 555 aa15.07■□□□□ 0
LCA5-202ENST00000392959 GOPCQ9HD26 462 aa15.07■□□□□ 0
LCA5-202ENST00000392959 PODXL2Q9NZ53 605 aa15.07■□□□□ 0
LCA5-202ENST00000392959 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
LCA5-202ENST00000392959 SMC1AQ14683 1233 aaKnown RBP15.07■□□□□ 0
LCA5-202ENST00000392959 EHBP1Q8NDI1 1231 aa15.07■□□□□ 0
LCA5-202ENST00000392959 ACEP12821 1306 aa15.07■□□□□ 0
LCA5-202ENST00000392959 NPHP3Q7Z494 1330 aa15.07■□□□□ 0
LCA5-202ENST00000392959 AKR1B10O60218 316 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms