RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 TTLL6Q8N841 843 aa20.55■□□□□ 0.88
CSHL1-204ENST00000392824 NRXN2Q9P2S2 1712 aa20.55■□□□□ 0.88
CSHL1-204ENST00000392824 NUP98P52948 1817 aa20.55■□□□□ 0.88
CSHL1-204ENST00000392824 AFDNP55196 1824 aaKnown RBP20.55■□□□□ 0.88
CSHL1-204ENST00000392824 ZBED9Q6R2W3 1325 aa20.54■□□□□ 0.88
CSHL1-204ENST00000392824 CCDC191Q8NCU4 936 aa20.54■□□□□ 0.88
CSHL1-204ENST00000392824 MASTLQ96GX5 879 aa20.54■□□□□ 0.88
CSHL1-204ENST00000392824 SH3TC1Q8TE82 1336 aa20.53■□□□□ 0.88
CSHL1-204ENST00000392824 KIF13BQ9NQT8 1826 aa20.53■□□□□ 0.88
CSHL1-204ENST00000392824 KLRG2A4D1S0 409 aaPredicted RBP20.53■□□□□ 0.88
CSHL1-204ENST00000392824 SRGNP10124 158 aa20.53■□□□□ 0.88
CSHL1-204ENST00000392824 ALDH1L2Q3SY69 923 aa20.53■□□□□ 0.88
CSHL1-204ENST00000392824 DNAAF4Q8WXU2 420 aa20.53■□□□□ 0.88
CSHL1-204ENST00000392824 SSH1Q8WYL5 1049 aa20.53■□□□□ 0.88
CSHL1-204ENST00000392824 CNKSR1Q969H4 720 aa20.53■□□□□ 0.88
CSHL1-204ENST00000392824 NLRP3Q96P20 1036 aa20.53■□□□□ 0.88
CSHL1-204ENST00000392824 ADCY9O60503 1353 aa20.52■□□□□ 0.88
CSHL1-204ENST00000392824 NPR1P16066 1061 aa20.52■□□□□ 0.88
CSHL1-204ENST00000392824 SLC10A5Q5PT55 438 aa20.52■□□□□ 0.88
CSHL1-204ENST00000392824 STYK1Q6J9G0 422 aa20.52■□□□□ 0.88
CSHL1-204ENST00000392824 MRPL50Q8N5N7 158 aaKnown RBP20.52■□□□□ 0.88
CSHL1-204ENST00000392824 CWC25Q9NXE8 425 aaPredicted RBP20.52■□□□□ 0.88
CSHL1-204ENST00000392824 ABCC12Q96J65 1359 aa20.51■□□□□ 0.87
CSHL1-204ENST00000392824 FAM89AQ96GI7 184 aa20.51■□□□□ 0.87
CSHL1-204ENST00000392824 SMC4Q9NTJ3 1288 aa20.51■□□□□ 0.87
CSHL1-204ENST00000392824 HCLS1P14317 486 aaPredicted RBP20.5■□□□□ 0.87
CSHL1-204ENST00000392824 HSP90B1P14625 803 aaKnown RBP20.5■□□□□ 0.87
CSHL1-204ENST00000392824 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
CSHL1-204ENST00000392824 ZBTB38Q8NAP3 1195 aaPredicted RBP20.5■□□□□ 0.87
CSHL1-204ENST00000392824 RPGRQ92834 1020 aaKnown RBP20.5■□□□□ 0.87
CSHL1-204ENST00000392824 BCL2L13Q9BXK5 485 aa20.5■□□□□ 0.87
CSHL1-204ENST00000392824 ALDH1B1P30837 517 aa20.49■□□□□ 0.87
CSHL1-204ENST00000392824 ARHGAP27Q6ZUM4 889 aa20.49■□□□□ 0.87
CSHL1-204ENST00000392824 SYNE4Q8N205 404 aa20.49■□□□□ 0.87
CSHL1-204ENST00000392824 N4BP2Q86UW6 1770 aaPredicted RBP20.49■□□□□ 0.87
CSHL1-204ENST00000392824 F6X3S4 739 aa20.48■□□□□ 0.87
CSHL1-204ENST00000392824 IGKV5-2P06315 115 aa20.48■□□□□ 0.87
CSHL1-204ENST00000392824 CRY2Q49AN0 593 aa20.48■□□□□ 0.87
CSHL1-204ENST00000392824 LINS1Q8NG48 757 aa20.48■□□□□ 0.87
CSHL1-204ENST00000392824 RBM17Q96I25 401 aaKnown RBP20.48■□□□□ 0.87
CSHL1-204ENST00000392824 NEURL1BA8MQ27 555 aa20.47■□□□□ 0.87
CSHL1-204ENST00000392824 IRS4O14654 1257 aaPredicted RBP20.47■□□□□ 0.87
CSHL1-204ENST00000392824 PCCAP05165 728 aaPredicted RBP20.47■□□□□ 0.87
CSHL1-204ENST00000392824 CWF19L2Q2TBE0 894 aaKnown RBP20.47■□□□□ 0.87
CSHL1-204ENST00000392824 PTPRCP08575 1304 aa20.47■□□□□ 0.87
CSHL1-204ENST00000392824 RIC1Q4ADV7 1423 aa20.46■□□□□ 0.87
CSHL1-204ENST00000392824 SLC4A10Q6U841 1118 aa20.46■□□□□ 0.87
CSHL1-204ENST00000392824 ZNF219Q9P2Y4 722 aaPredicted RBP20.46■□□□□ 0.87
CSHL1-204ENST00000392824 HOXA10P31260 410 aaPredicted RBP20.45■□□□□ 0.86
CSHL1-204ENST00000392824 RARSP54136 660 aaKnown RBP20.45■□□□□ 0.86
CSHL1-204ENST00000392824 PRPF40BQ6NWY9 871 aaKnown RBP20.45■□□□□ 0.86
CSHL1-204ENST00000392824 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
CSHL1-204ENST00000392824 KIAA1551Q9HCM1 1747 aa20.44■□□□□ 0.86
CSHL1-204ENST00000392824 C21orf2O43822 256 aa20.44■□□□□ 0.86
CSHL1-204ENST00000392824 GCKRQ14397 625 aa20.44■□□□□ 0.86
CSHL1-204ENST00000392824 BEND3Q5T5X7 828 aa20.44■□□□□ 0.86
CSHL1-204ENST00000392824 JARID2Q92833 1246 aaPredicted RBP20.44■□□□□ 0.86
CSHL1-204ENST00000392824 SOGA3Q5TF21 947 aa20.43■□□□□ 0.86
CSHL1-204ENST00000392824 DDX46Q7L014 1031 aaKnown RBP20.43■□□□□ 0.86
CSHL1-204ENST00000392824 CRAMP1Q96RY5 1269 aa20.43■□□□□ 0.86
CSHL1-204ENST00000392824 ARFGEF2Q9Y6D5 1785 aa20.43■□□□□ 0.86
CSHL1-204ENST00000392824 CACNA1FO60840 1977 aa20.43■□□□□ 0.86
CSHL1-204ENST00000392824 GOLGB1Q14789 3259 aaKnown RBP20.42■□□□□ 0.86
CSHL1-204ENST00000392824 ANKRD31Q8N7Z5 1873 aa20.42■□□□□ 0.86
CSHL1-204ENST00000392824 SRCIN1Q9C0H9 1055 aa20.42■□□□□ 0.86
CSHL1-204ENST00000392824 NOB1Q9ULX3 412 aaKnown RBP20.42■□□□□ 0.86
CSHL1-204ENST00000392824 ANKRD36CQ5JPF3 1778 aa20.41■□□□□ 0.86
CSHL1-204ENST00000392824 H7C1W4 665 aa20.41■□□□□ 0.86
CSHL1-204ENST00000392824 PDE8AO60658 829 aa20.41■□□□□ 0.86
CSHL1-204ENST00000392824 ALDH1L1O75891 902 aa20.41■□□□□ 0.86
CSHL1-204ENST00000392824 YY1P25490 414 aa20.41■□□□□ 0.86
CSHL1-204ENST00000392824 BRPF1P55201 1214 aaPredicted RBP20.41■□□□□ 0.86
CSHL1-204ENST00000392824 SF3B3Q15393 1217 aaKnown RBP20.41■□□□□ 0.86
CSHL1-204ENST00000392824 UBE3BQ7Z3V4 1068 aa20.41■□□□□ 0.86
CSHL1-204ENST00000392824 TMX4Q9H1E5 349 aaPredicted RBP20.41■□□□□ 0.86
CSHL1-204ENST00000392824 CDHR2Q9BYE9 1310 aa20.4■□□□□ 0.86
CSHL1-204ENST00000392824 API5Q9BZZ5 524 aaKnown RBP20.4■□□□□ 0.86
CSHL1-204ENST00000392824 KIF16BQ96L93 1317 aa20.39■□□□□ 0.85
CSHL1-204ENST00000392824 IPO8O15397 1037 aaKnown RBP20.39■□□□□ 0.85
CSHL1-204ENST00000392824 BBOX1O75936 387 aa20.39■□□□□ 0.85
CSHL1-204ENST00000392824 C9orf78Q9NZ63 289 aaPredicted RBP20.39■□□□□ 0.85
CSHL1-204ENST00000392824 CCDC152Q4G0S7 254 aa20.38■□□□□ 0.85
CSHL1-204ENST00000392824 CCDC93Q567U6 631 aa20.38■□□□□ 0.85
CSHL1-204ENST00000392824 C7orf43Q8WVR3 580 aa20.38■□□□□ 0.85
CSHL1-204ENST00000392824 ABCC4O15439 1325 aa20.37■□□□□ 0.85
CSHL1-204ENST00000392824 PPEF1O14829 653 aaPredicted RBP20.37■□□□□ 0.85
CSHL1-204ENST00000392824 GRAPQ13588 217 aa20.37■□□□□ 0.85
CSHL1-204ENST00000392824 CC2D2BQ6DHV5 1058 aa20.37■□□□□ 0.85
CSHL1-204ENST00000392824 RTKN2Q8IZC4 609 aa20.37■□□□□ 0.85
CSHL1-204ENST00000392824 GRAPLQ8TC17 118 aaPredicted RBP20.37■□□□□ 0.85
CSHL1-204ENST00000392824 FRAT1Q92837 279 aaPredicted RBP20.37■□□□□ 0.85
CSHL1-204ENST00000392824 UTRNP46939 3433 aa20.37■□□□□ 0.85
CSHL1-204ENST00000392824 GRM8O00222 908 aa20.36■□□□□ 0.85
CSHL1-204ENST00000392824 BCAR3O75815 825 aa20.36■□□□□ 0.85
CSHL1-204ENST00000392824 ARHGAP45Q92619 1136 aa20.36■□□□□ 0.85
CSHL1-204ENST00000392824 YTHDC1Q96MU7 727 aaKnown RBP20.36■□□□□ 0.85
CSHL1-204ENST00000392824 TNRC6CQ9HCJ0 1690 aaKnown RBP20.35■□□□□ 0.85
CSHL1-204ENST00000392824 BRCA1P38398 1863 aaKnown RBP20.35■□□□□ 0.85
CSHL1-204ENST00000392824 CTSWP56202 376 aa20.35■□□□□ 0.85
CSHL1-204ENST00000392824 CCDC85AQ96PX6 553 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms