RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 DIAPH3Q9NSV4 1193 aa12.99□□□□□ -0.33
BRF1-204ENST00000392557 KDM6AO15550 1401 aaPredicted RBP12.98□□□□□ -0.33
BRF1-204ENST00000392557 ZCRB1Q8TBF4 217 aaKnown RBP12.98□□□□□ -0.33
BRF1-204ENST00000392557 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
BRF1-204ENST00000392557 GRM8O00222 908 aa12.98□□□□□ -0.33
BRF1-204ENST00000392557 SNRPA1P09661 255 aaKnown RBP12.98□□□□□ -0.33
BRF1-204ENST00000392557 DRC7Q8IY82 874 aa12.98□□□□□ -0.33
BRF1-204ENST00000392557 SUCLG2Q96I99 432 aa12.98□□□□□ -0.33
BRF1-204ENST00000392557 BICC1Q9H694 974 aaKnown RBP12.98□□□□□ -0.33
BRF1-204ENST00000392557 LARP1Q6PKG0 1096 aaKnown RBP12.97□□□□□ -0.33
BRF1-204ENST00000392557 SASS6Q6UVJ0 657 aa12.97□□□□□ -0.33
BRF1-204ENST00000392557 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
BRF1-204ENST00000392557 ZNF500O60304 480 aaPredicted RBP12.97□□□□□ -0.33
BRF1-204ENST00000392557 ADCY5O95622 1261 aa12.97□□□□□ -0.33
BRF1-204ENST00000392557 LINS1Q8NG48 757 aa12.97□□□□□ -0.33
BRF1-204ENST00000392557 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
BRF1-204ENST00000392557 CASTP20810 708 aaKnown RBP12.97□□□□□ -0.33
BRF1-204ENST00000392557 GIMAP6Q6P9H5 292 aa12.97□□□□□ -0.33
BRF1-204ENST00000392557 CCDC83Q8IWF9 413 aa12.97□□□□□ -0.33
BRF1-204ENST00000392557 CLASRPQ8N2M8 674 aaKnown RBP12.97□□□□□ -0.33
BRF1-204ENST00000392557 PDLIM2Q96JY6 352 aa12.97□□□□□ -0.33
BRF1-204ENST00000392557 PDIA6Q15084 440 aa12.96□□□□□ -0.33
BRF1-204ENST00000392557 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.33
BRF1-204ENST00000392557 RAB11FIP3O75154 756 aa12.96□□□□□ -0.33
BRF1-204ENST00000392557 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.33
BRF1-204ENST00000392557 DCCP43146 1447 aa12.96□□□□□ -0.33
BRF1-204ENST00000392557 ALDH1L1O75891 902 aa12.96□□□□□ -0.34
BRF1-204ENST00000392557 G3BP1Q13283 466 aaKnown RBP eCLIP12.96□□□□□ -0.34
BRF1-204ENST00000392557 FERMT3Q86UX7 667 aa12.96□□□□□ -0.34
BRF1-204ENST00000392557 AACSQ86V21 672 aa12.96□□□□□ -0.34
BRF1-204ENST00000392557 CCDC8Q9H0W5 538 aaPredicted RBP12.96□□□□□ -0.34
BRF1-204ENST00000392557 OSBPL3Q9H4L5 887 aa12.96□□□□□ -0.34
BRF1-204ENST00000392557 CACNA1FO60840 1977 aa12.96□□□□□ -0.34
BRF1-204ENST00000392557 PPFIA3O75145 1194 aa12.95□□□□□ -0.34
BRF1-204ENST00000392557 POLA2Q14181 598 aa12.95□□□□□ -0.34
BRF1-204ENST00000392557 UBE3BQ7Z3V4 1068 aa12.95□□□□□ -0.34
BRF1-204ENST00000392557 MAP7D2Q96T17 732 aa12.95□□□□□ -0.34
BRF1-204ENST00000392557 LMO7Q8WWI1 1683 aa12.95□□□□□ -0.34
BRF1-204ENST00000392557 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
BRF1-204ENST00000392557 CHAF1AQ13111 956 aaPredicted RBP12.95□□□□□ -0.34
BRF1-204ENST00000392557 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
BRF1-204ENST00000392557 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
BRF1-204ENST00000392557 SYTL4Q96C24 671 aaPredicted RBP12.95□□□□□ -0.34
BRF1-204ENST00000392557 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.95□□□□□ -0.34
BRF1-204ENST00000392557 WDR17Q8IZU2 1322 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 ALS2Q96Q42 1657 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 STX6O43752 255 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 MCM5P33992 734 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 CCDC183Q5T5S1 534 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 JAKMIP1Q96N16 626 aaKnown RBP12.94□□□□□ -0.34
BRF1-204ENST00000392557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.345e-8■■■■□ 20
BRF1-204ENST00000392557 ATP6V1DQ9Y5K8 247 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 IL2RBP14784 551 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 AK2P54819 239 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 CAMK4Q16566 473 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 ZBTB3Q9H5J0 574 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 A1BGP04217 495 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 ANAPC15P60006 121 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
BRF1-204ENST00000392557 IL25Q9H293 177 aa12.94□□□□□ -0.34
BRF1-204ENST00000392557 KDM3BQ7LBC6 1761 aa12.93□□□□□ -0.34
BRF1-204ENST00000392557 PRPF40BQ6NWY9 871 aaKnown RBP12.93□□□□□ -0.34
BRF1-204ENST00000392557 BTG4Q9NY30 223 aa12.93□□□□□ -0.34
BRF1-204ENST00000392557 NEURL1BA8MQ27 555 aa12.93□□□□□ -0.34
BRF1-204ENST00000392557 DYNC1I1O14576 645 aa12.93□□□□□ -0.34
BRF1-204ENST00000392557 HDAC5Q9UQL6 1122 aa12.93□□□□□ -0.34
BRF1-204ENST00000392557 SALL3Q9BXA9 1300 aa12.93□□□□□ -0.34
BRF1-204ENST00000392557 PHRF1Q9P1Y6 1649 aaKnown RBP12.93□□□□□ -0.34
BRF1-204ENST00000392557 A0A087WZG4 1122 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 SYT1P21579 422 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 NOLC1Q14978 699 aaKnown RBP eCLIP12.92□□□□□ -0.34
BRF1-204ENST00000392557 ZSCAN22P10073 491 aaPredicted RBP12.92□□□□□ -0.34
BRF1-204ENST00000392557 DNM1Q05193 864 aaKnown RBP12.92□□□□□ -0.34
BRF1-204ENST00000392557 CUL4AQ13619 759 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 GCKRQ14397 625 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 NECAB1Q8N987 351 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 LIMCH1Q9UPQ0 1083 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 PCDH11XQ9BZA7 1347 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 PCDH11YQ9BZA8 1340 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 FAM184AQ8NB25 1140 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 TCEANC2Q96MN5 208 aa12.92□□□□□ -0.34
BRF1-204ENST00000392557 GJB2P29033 226 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 METTL22Q9BUU2 404 aaPredicted RBP12.91□□□□□ -0.34
BRF1-204ENST00000392557 HEG1Q9ULI3 1381 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 STK3Q13188 491 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 TTLL7Q6ZT98 887 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 GPATCH3Q96I76 525 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 KAZALD1Q96I82 304 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 STAP2Q9UGK3 403 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 SOS2Q07890 1332 aaPredicted RBP12.91□□□□□ -0.34
BRF1-204ENST00000392557 ZKSCAN1P17029 563 aaPredicted RBP12.91□□□□□ -0.34
BRF1-204ENST00000392557 RASEFQ8IZ41 740 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 PI4K2BQ8TCG2 481 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 BOLA2Q9H3K6 86 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 PDRG1Q9NUG6 133 aa12.91□□□□□ -0.34
BRF1-204ENST00000392557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.91□□□□□ -0.34
BRF1-204ENST00000392557 FOSBP53539 338 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms