RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
NLRP3-205ENST00000391827 ANKRD13DQ6ZTN6 518 aa12.99□□□□□ -0.33
NLRP3-205ENST00000391827 TTC5Q8N0Z6 440 aa12.99□□□□□ -0.33
NLRP3-205ENST00000391827 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.99□□□□□ -0.33
NLRP3-205ENST00000391827 RFX7Q2KHR2 1363 aa12.99□□□□□ -0.33
NLRP3-205ENST00000391827 PTH1RQ03431 593 aa12.99□□□□□ -0.33
NLRP3-205ENST00000391827 NCLP19338 710 aaKnown RBP12.99□□□□□ -0.33
NLRP3-205ENST00000391827 NOL8Q76FK4 1167 aaKnown RBP12.99□□□□□ -0.33
NLRP3-205ENST00000391827 MAP4K1Q92918 833 aa12.99□□□□□ -0.33
NLRP3-205ENST00000391827 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
NLRP3-205ENST00000391827 MYD88Q99836 296 aa12.99□□□□□ -0.33
NLRP3-205ENST00000391827 TMEM63CQ9P1W3 806 aa12.99□□□□□ -0.33
NLRP3-205ENST00000391827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.99□□□□□ -0.33
NLRP3-205ENST00000391827 UBR2Q8IWV8 1755 aa12.98□□□□□ -0.33
NLRP3-205ENST00000391827 MED23Q9ULK4 1368 aa12.98□□□□□ -0.33
NLRP3-205ENST00000391827 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
NLRP3-205ENST00000391827 MYL6BP14649 208 aa12.98□□□□□ -0.33
NLRP3-205ENST00000391827 RFX5P48382 616 aaPredicted RBP12.98□□□□□ -0.33
NLRP3-205ENST00000391827 LRSAM1Q6UWE0 723 aa12.98□□□□□ -0.33
NLRP3-205ENST00000391827 SH2B1Q9NRF2 756 aaPredicted RBP12.98□□□□□ -0.33
NLRP3-205ENST00000391827 AFDNP55196 1824 aaKnown RBP12.98□□□□□ -0.33
NLRP3-205ENST00000391827 ESPNB1AK53 854 aa12.98□□□□□ -0.33
NLRP3-205ENST00000391827 ANP32BQ92688 251 aaKnown RBP12.98□□□□□ -0.33
NLRP3-205ENST00000391827 USP16Q9Y5T5 823 aa12.98□□□□□ -0.33
NLRP3-205ENST00000391827 PAPPAQ13219 1627 aa12.98□□□□□ -0.33
NLRP3-205ENST00000391827 CASTP20810 708 aaKnown RBP12.97□□□□□ -0.33
NLRP3-205ENST00000391827 EPHA10Q5JZY3 1008 aa12.97□□□□□ -0.33
NLRP3-205ENST00000391827 DDX17Q92841 729 aaKnown RBP12.97□□□□□ -0.33
NLRP3-205ENST00000391827 TRIM44Q96DX7 344 aaPredicted RBP12.97□□□□□ -0.33
NLRP3-205ENST00000391827 PDCL3Q9H2J4 239 aa12.97□□□□□ -0.33
NLRP3-205ENST00000391827 KLHL34Q8N239 644 aa12.97□□□□□ -0.33
NLRP3-205ENST00000391827 ALDH8A1Q9H2A2 487 aaPredicted RBP12.97□□□□□ -0.33
NLRP3-205ENST00000391827 XIRP1Q702N8 1843 aaKnown RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 PRIM1P49642 420 aaKnown RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 PLBD2Q8NHP8 589 aa12.96□□□□□ -0.33
NLRP3-205ENST00000391827 CHAMP1Q96JM3 812 aa12.96□□□□□ -0.33
NLRP3-205ENST00000391827 TLR7Q9NYK1 1049 aaKnown RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 NSFL1CQ9UNZ2 370 aaKnown RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 CYP46A1Q9Y6A2 500 aa12.96□□□□□ -0.33
NLRP3-205ENST00000391827 ZSCAN22P10073 491 aaPredicted RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 PDIA4P13667 645 aaKnown RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 CASP7P55210 303 aa12.96□□□□□ -0.33
NLRP3-205ENST00000391827 NMIQ13287 307 aaPredicted RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 PRPF40BQ6NWY9 871 aaKnown RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 SYAP1Q96A49 352 aaPredicted RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 CCDC8Q9H0W5 538 aaPredicted RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 PDRG1Q9NUG6 133 aa12.96□□□□□ -0.33
NLRP3-205ENST00000391827 RBM27Q9P2N5 1060 aaKnown RBP12.96□□□□□ -0.33
NLRP3-205ENST00000391827 NUP188Q5SRE5 1749 aa12.96□□□□□ -0.34
NLRP3-205ENST00000391827 ATP5JP18859 108 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 CABP4P57796 275 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 PTPN12Q05209 780 aaKnown RBP12.95□□□□□ -0.34
NLRP3-205ENST00000391827 TSGA10IPQ3SY00 556 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 HS1BP3Q53T59 392 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 CREB3L3Q68CJ9 461 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 CABLES1Q8TDN4 633 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 PDLIM2Q96JY6 352 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
NLRP3-205ENST00000391827 RBSNQ9H1K0 784 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 RBM8AQ9Y5S9 174 aaKnown RBP12.95□□□□□ -0.34
NLRP3-205ENST00000391827 ADCK5Q3MIX3 580 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 FOXD4L5Q5VV16 416 aaPredicted RBP12.95□□□□□ -0.34
NLRP3-205ENST00000391827 FOXD4L4Q8WXT5 416 aaPredicted RBP12.95□□□□□ -0.34
NLRP3-205ENST00000391827 STX6O43752 255 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 PSMA5P28066 241 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 CHRNA2Q15822 529 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 TICAM2Q86XR7 235 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 FAM227BQ96M60 508 aa12.95□□□□□ -0.34
NLRP3-205ENST00000391827 WDR17Q8IZU2 1322 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 HMG20BQ9P0W2 317 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 SMC3Q9UQE7 1217 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 ATP6V1DQ9Y5K8 247 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 KCPQ6ZWJ8 1503 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 SYT1P21579 422 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 NKX1-1Q15270 411 aaPredicted RBP12.94□□□□□ -0.34
NLRP3-205ENST00000391827 TNNI3KQ59H18 835 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 SIL1Q9H173 461 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 FPGT-TNNI3KV9GXZ4 949 aa12.94□□□□□ -0.34
NLRP3-205ENST00000391827 A0A0D9SFI3 127 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 ERVV-2B6SEH9 535 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 SLC27A2O14975 620 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 USPL1Q5W0Q7 1092 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 FSD1Q9BTV5 496 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 PRDM4Q9UKN5 801 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 TJP1Q07157 1748 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 TNS2Q63HR2 1409 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 LARGE1O95461 756 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 F13A1P00488 732 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 USP48Q86UV5 1035 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 KLHDC4Q8TBB5 520 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 BOLA2Q9H3K6 86 aa12.93□□□□□ -0.34
NLRP3-205ENST00000391827 SYCE3A1L190 88 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 PHF14O94880 888 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 UBE3BQ7Z3V4 1068 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 DBNLQ9UJU6 430 aaKnown RBP12.92□□□□□ -0.34
NLRP3-205ENST00000391827 COL5A2P05997 1499 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms