RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 FBXO11Q86XK2 927 aa4.32□□□□□ -1.72
RNU6-239P-201ENST00000390990 DNAJB12Q9NXW2 375 aaKnown RBP4.32□□□□□ -1.72
RNU6-239P-201ENST00000390990 HCN4Q9Y3Q4 1203 aa4.32□□□□□ -1.72
RNU6-239P-201ENST00000390990 RGS9O75916 674 aaPredicted RBP4.31□□□□□ -1.72
RNU6-239P-201ENST00000390990 TAL1P17542 331 aaPredicted RBP4.31□□□□□ -1.72
RNU6-239P-201ENST00000390990 IRAK1P51617 712 aa4.31□□□□□ -1.72
RNU6-239P-201ENST00000390990 GTF2IP78347 998 aa4.31□□□□□ -1.72
RNU6-239P-201ENST00000390990 MSL1Q68DK7 614 aa4.31□□□□□ -1.72
RNU6-239P-201ENST00000390990 SUSD3Q96L08 255 aa4.31□□□□□ -1.72
RNU6-239P-201ENST00000390990 OAS3Q9Y6K5 1087 aaKnown RBP4.31□□□□□ -1.72
RNU6-239P-201ENST00000390990 FSTP19883 344 aa4.3□□□□□ -1.72
RNU6-239P-201ENST00000390990 PLAURQ03405 335 aa4.3□□□□□ -1.72
RNU6-239P-201ENST00000390990 FZD5Q13467 585 aa4.3□□□□□ -1.72
RNU6-239P-201ENST00000390990 GRIK5Q16478 980 aa4.3□□□□□ -1.72
RNU6-239P-201ENST00000390990 C1orf53Q5VUE5 145 aa4.3□□□□□ -1.72
RNU6-239P-201ENST00000390990 DTWD1Q8N5C7 304 aa4.3□□□□□ -1.72
RNU6-239P-201ENST00000390990 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
RNU6-239P-201ENST00000390990 PHACTR1Q9C0D0 580 aa4.3□□□□□ -1.72
RNU6-239P-201ENST00000390990 ANKIB1Q9P2G1 1089 aa4.3□□□□□ -1.72
RNU6-239P-201ENST00000390990 DEAF1O75398 565 aaPredicted RBP4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 PSME1Q06323 249 aa4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 SEMA3FQ13275 785 aa4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 EML3Q32P44 896 aa4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 POTEAQ6S8J7 498 aa4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 IGF2-ASQ6U949 168 aa4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 DZIP1LQ8IYY4 767 aaKnown RBP4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 GSX2Q9BZM3 304 aa4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 TSPAN10Q9H1Z9 355 aaPredicted RBP4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 GDPD2Q9HCC8 539 aa4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 NOD1Q9Y239 953 aa4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 RNF114Q9Y508 228 aa4.29□□□□□ -1.72
RNU6-239P-201ENST00000390990 ADAMTS4O75173 837 aa4.28□□□□□ -1.72
RNU6-239P-201ENST00000390990 ALX3O95076 343 aa4.28□□□□□ -1.72
RNU6-239P-201ENST00000390990 HIRAP54198 1017 aaPredicted RBP4.28□□□□□ -1.72
RNU6-239P-201ENST00000390990 BRPF1P55201 1214 aaPredicted RBP4.28□□□□□ -1.72
RNU6-239P-201ENST00000390990 NEUROD2Q15784 382 aa4.28□□□□□ -1.72
RNU6-239P-201ENST00000390990 BTLAQ7Z6A9 289 aa4.28□□□□□ -1.72
RNU6-239P-201ENST00000390990 SLC51AQ86UW1 340 aa4.28□□□□□ -1.72
RNU6-239P-201ENST00000390990 FAM35AQ86V20 835 aa4.28□□□□□ -1.72
RNU6-239P-201ENST00000390990 LPIN3Q9BQK8 851 aa4.28□□□□□ -1.72
RNU6-239P-201ENST00000390990 ZBTB42B2RXF5 422 aa4.27□□□□□ -1.73
RNU6-239P-201ENST00000390990 SKIP12755 728 aa4.27□□□□□ -1.73
RNU6-239P-201ENST00000390990 CPB1P15086 417 aa4.27□□□□□ -1.73
RNU6-239P-201ENST00000390990 NFKB1P19838 968 aa4.27□□□□□ -1.73
RNU6-239P-201ENST00000390990 GP2P55259 537 aaKnown RBP4.27□□□□□ -1.73
RNU6-239P-201ENST00000390990 PSMA6P60900 246 aaKnown RBP4.27□□□□□ -1.73
RNU6-239P-201ENST00000390990 NCOA4Q13772 614 aa4.27□□□□□ -1.73
RNU6-239P-201ENST00000390990 PERM1Q5SV97 790 aa4.27□□□□□ -1.73
RNU6-239P-201ENST00000390990 PRM3Q9NNZ6 103 aa4.27□□□□□ -1.73
RNU6-239P-201ENST00000390990 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.27□□□□□ -1.73
RNU6-239P-201ENST00000390990 KIAA1324LA8MWY0 1029 aaPredicted RBP4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 DLL1O00548 723 aa4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 ZBTB7BO15156 539 aaPredicted RBP4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 TGFB1P01137 390 aa4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 GRNP28799 593 aaKnown RBP4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 ABL2P42684 1182 aa4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 CCINQ13939 588 aa4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 WFDC8Q8IUA0 241 aa4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 DEPDC4Q8N2C3 294 aa4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 AKTIPQ9H8T0 292 aa4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 EFCC1Q9HA90 598 aa4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 KIAA1024Q9UPX6 916 aa4.26□□□□□ -1.73
RNU6-239P-201ENST00000390990 WASHC4Q2M389 1173 aa4.25□□□□□ -1.73
RNU6-239P-201ENST00000390990 TPCN2Q8NHX9 752 aa4.25□□□□□ -1.73
RNU6-239P-201ENST00000390990 PNMA5Q96PV4 448 aa4.25□□□□□ -1.73
RNU6-239P-201ENST00000390990 FRRS1LQ9P0K9 344 aa4.25□□□□□ -1.73
RNU6-239P-201ENST00000390990 F8W735 103 aaPredicted RBP4.24□□□□□ -1.73
RNU6-239P-201ENST00000390990 C21orf2O43822 256 aa4.24□□□□□ -1.73
RNU6-239P-201ENST00000390990 LZTS3O60299 673 aaPredicted RBP4.24□□□□□ -1.73
RNU6-239P-201ENST00000390990 SOX11P35716 441 aa4.24□□□□□ -1.73
RNU6-239P-201ENST00000390990 MLLT1Q03111 559 aaPredicted RBP4.24□□□□□ -1.73
RNU6-239P-201ENST00000390990 ALDH16A1Q8IZ83 802 aa4.24□□□□□ -1.73
RNU6-239P-201ENST00000390990 TMEM130Q8N3G9 435 aa4.24□□□□□ -1.73
RNU6-239P-201ENST00000390990 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
RNU6-239P-201ENST00000390990 ZFATQ9P243 1243 aa4.24□□□□□ -1.73
RNU6-239P-201ENST00000390990 PPP1R12BO60237 982 aaPredicted RBP4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 MAP3K6O95382 1288 aa4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 IGLV1-40P01703 118 aa4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 CLDN10P78369 228 aa4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 CCDC102BQ68D86 513 aa4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 ELMSAN1Q6PJG2 1045 aa4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 TRPM4Q8TD43 1214 aa4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 TTC9Q92623 222 aa4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 DMGDHQ9UI17 866 aaKnown RBP4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 BCS1LQ9Y276 419 aa4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 RAXQ9Y2V3 346 aa4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 CHMP3Q9Y3E7 222 aa4.23□□□□□ -1.73
RNU6-239P-201ENST00000390990 USP17L5A8MUK1 530 aa4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 SPINK2P20155 84 aa4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 TARSP26639 723 aaKnown RBP4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 Q6ZS46 218 aa4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 HFE2Q6ZVN8 426 aa4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 DHX32Q7L7V1 743 aaKnown RBP4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 KRT25Q7Z3Z0 450 aa4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 ZDHHC13Q8IUH4 622 aa4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 AGGF1Q8N302 714 aaeCLIP4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 TSEN2Q8NCE0 465 aaKnown RBP4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 NFATC2IPQ8NCF5 419 aa4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 IFT43Q96FT9 208 aa4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 NGLY1Q96IV0 654 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms