RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 DDX41Q9UJV9 622 aaKnown RBP2.81□□□□□ -1.96
SNORA48.1-201ENST00000390879 BCS1LQ9Y276 419 aa2.81□□□□□ -1.96
SNORA48.1-201ENST00000390879 TMA7Q9Y2S6 64 aaKnown RBP2.81□□□□□ -1.96
SNORA48.1-201ENST00000390879 HRH3Q9Y5N1 445 aa2.81□□□□□ -1.96
SNORA48.1-201ENST00000390879 CADPSQ9ULU8 1353 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 F6X3S4 739 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 TNFRSF21O75509 655 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 STK10O94804 968 aaKnown RBP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 NEFLP07196 543 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 USP17L7P0C7H9 530 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 NCLP19338 710 aaKnown RBP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 GTF2E1P29083 439 aaPredicted RBP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 PTGIRP43119 386 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 PHKA2P46019 1235 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 BMS1Q14692 1282 aaKnown RBP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 GNASQ5JWF2 1037 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 SLC27A3Q5K4L6 730 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 POTEAQ6S8J7 498 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 Q6ZNB5 142 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 LIAT1Q6ZQX7 453 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 NOP9Q86U38 636 aaKnown RBP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 VPS37DQ86XT2 251 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 PPARGC1BQ86YN6 1023 aaKnown RBP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 ZNF295-AS1Q8N0V1 137 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 CCDC74AQ96AQ1 378 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 ITPKCQ96DU7 683 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 KLRG1Q96E93 195 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 FRMD6Q96NE9 622 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 OSBPL7Q9BZF2 842 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 DNAJC25Q9H1X3 360 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 C12orf49Q9H741 205 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 ZFAND3Q9H8U3 227 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 SRA1Q9HD15 236 aaKnown RBP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 NPHS2Q9NP85 383 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 COPRSQ9NQ92 184 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 CUEDC1Q9NWM3 386 aaPredicted RBP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 WASF2Q9Y6W5 498 aa2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 V9GY48 417 aaPredicted RBP2.8□□□□□ -1.96
SNORA48.1-201ENST00000390879 UBAP1LF5GYI3 381 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 TGFBR3LH3BV60 316 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 WNT7AO00755 349 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 PHACTR2O75167 634 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 GADD45BO75293 160 aaPredicted RBP2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 ZIC2O95409 532 aaPredicted RBP2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 IDH3AP50213 366 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 WDR4P57081 412 aaKnown RBP2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 PAK2Q13177 524 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 TAF1CQ15572 869 aaPredicted RBP2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 C4orf17Q53FE4 359 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 C1orf53Q5VUE5 145 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 NXPE4Q6UWF7 544 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 BICDL1Q6ZP65 573 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 ZNF438Q7Z4V0 828 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 MCF2L2Q86YR7 1114 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 CMTR1Q8N1G2 835 aaKnown RBP2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 MPNDQ8N594 471 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 ZNF280CQ8ND82 737 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 RHBDD1Q8TEB9 315 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 ZNF775Q96BV0 537 aaPredicted RBP2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 SUSD3Q96L08 255 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 GMLQ99445 158 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 NEUROD4Q9HD90 331 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 FAM13BQ9NYF5 915 aa2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.79□□□□□ -1.96
SNORA48.1-201ENST00000390879 TLDC2A0PJX2 215 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 RPLP1P05386 114 aaKnown RBP2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 FGRP09769 529 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 TATP17735 454 aaPredicted RBP2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 PTPN12Q05209 780 aaKnown RBP2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 FOXC1Q12948 553 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 TRIP4Q15650 581 aaPredicted RBP2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 NBPF1Q3BBV0 1214 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 SDE2Q6IQ49 451 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 Q6ZVU0 165 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 ANKRD13AQ8IZ07 590 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 SNX29Q8TEQ0 813 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 EMID1Q96A84 441 aaPredicted RBP2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 ARMC5Q96C12 935 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 GPRASP2Q96D09 838 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 BCO2Q9BYV7 579 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 OSBPL2Q9H1P3 480 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 ELP3Q9H9T3 547 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 ZFYVE28Q9HCC9 887 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 POLMQ9NP87 494 aaPredicted RBP2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 TMEM63CQ9P1W3 806 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 FAM8A1Q9UBU6 413 aa2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 TTF2Q9UNY4 1162 aaKnown RBP2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 RTCBQ9Y3I0 505 aaKnown RBP2.78□□□□□ -1.96
SNORA48.1-201ENST00000390879 USP31Q70CQ4 1352 aa2.77□□□□□ -1.97
SNORA48.1-201ENST00000390879 MINDY4BA8MYZ0 360 aa2.77□□□□□ -1.97
SNORA48.1-201ENST00000390879 GIPC1O14908 333 aa2.77□□□□□ -1.97
SNORA48.1-201ENST00000390879 EREGO14944 169 aa2.77□□□□□ -1.97
SNORA48.1-201ENST00000390879 ITGBL1O95965 494 aaPredicted RBP2.77□□□□□ -1.97
SNORA48.1-201ENST00000390879 SSBP05455 408 aaKnown RBP eCLIP2.77□□□□□ -1.97
SNORA48.1-201ENST00000390879 ATF4P18848 351 aaPredicted RBP2.77□□□□□ -1.97
SNORA48.1-201ENST00000390879 SLC19A1P41440 591 aa2.77□□□□□ -1.97
SNORA48.1-201ENST00000390879 ARSDP51689 593 aa2.77□□□□□ -1.97
SNORA48.1-201ENST00000390879 MAP3K11Q16584 847 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms