RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 A0A1W2PQ72 361 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 A0A1W2PRU2 124 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 RBM47A0AV96 593 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP23-1A1A580 65 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TTC24A2A3L6 582 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 HMX2A2RU54 273 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FAM221AA4D161 298 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GRID2IPA4D2P6 1211 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SH3D21A4FU49 640 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PSDA5PKW4 1024 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FAM221BA6H8Z2 402 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 C2orf78A6NCI8 922 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FAM187AA6NFU0 413 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MOXD2PA6NHM9 499 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 OTOL1A6NHN0 477 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PRSS29PA6NIE9 313 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SOWAHDA6NJG2 315 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TMEM88BA6NKF7 163 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TMEM200CA6NKL6 621 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SHISA7A6NL88 538 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ELOA3DA6NLF2 546 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FAM170BA6NMN3 283 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 DBX1A6NMT0 343 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SRRM3A6NNA2 597 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 DRGXA6NNA5 263 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SPDYE16A6NNV3 312 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TTLL8A6PVC2 850 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 BTBD11A6QL63 1104 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CYSRT1A8MQ03 144 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 METTL12A8MUP2 240 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PHF20L1A8MW92 1017 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PRR33A8MZF0 331 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 AHRRA9YTQ3 701 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TMEM229AB2RXF0 380 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NBPF26B4DH59 902 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 C9orf172C9J069 976 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 C11orf95C9JLR9 678 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CFAP99D6REC4 459 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NPIPB6E9PJ23 425 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 F8W735 103 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FAM229AH3BQW9 127 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TGFBR3LH3BV60 316 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PANO1I0J062 215 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 J3QW42 95 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 K7ELQ4 463 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 IFNL4K9M1U5 179 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ERVH48-1M5A8F1 160 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 OVOL3O00110 214 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FZD9O00144 591 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ACOT7O00154 380 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GPR25O00155 361 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GTPBP1O00178 669 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MASP2O00187 686 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ETV2O00321 342 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PIK3CDO00329 1044 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MATN2O00339 956 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GFRA2O00451 464 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SOX1O00570 391 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NTN3O00634 580 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 WNT10BO00744 389 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CDK2AP1O14519 115 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 DVL2O14641 736 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 IRS4O14654 1257 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 RIOK3O14730 519 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MSTNO14793 375 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TNFRSF10CO14798 259 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FFAR3O14843 346 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 IRF6O14896 467 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TRIM66O15016 1216 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SEMA3EO15041 775 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 U2SURPO15042 1029 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 N4BP3O15049 544 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ADAMTS3O15072 1205 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 AXIN1O15169 862 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GNPATO15228 680 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 VGFO15240 615 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SHOXO15266 292 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TP73O15350 636 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TMPRSS2O15393 492 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CAPN5O15484 640 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GSC2O15499 205 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 DDX3YO15523 660 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GPR42O15529 346 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 DYNC1LI2O43237 492 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 HOXA2O43364 376 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 HNRNPRO43390 633 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 KCNAB3O43448 404 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SPRY1O43609 319 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NARSO43776 548 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 KIF1CO43896 1103 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ZNF862O60290 1169 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 LZTS3O60299 673 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FZD6O60353 706 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NOBOXO60393 691 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FOXD2O60548 495 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GREM1O60565 184 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MSCO60682 206 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TRIM13O60858 407 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 DNAJA2O60884 412 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms