RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 DDNO94850 711 aaPredicted RBP9.07□□□□□ -0.96
TRAV13-1-201ENST00000390436 HSP90AB1P08238 724 aaKnown RBP9.07□□□□□ -0.96
TRAV13-1-201ENST00000390436 LMNB1P20700 586 aa9.07□□□□□ -0.96
TRAV13-1-201ENST00000390436 EIF5P55010 431 aaKnown RBP9.07□□□□□ -0.96
TRAV13-1-201ENST00000390436 FMR1Q06787 632 aaKnown RBP eCLIP9.07□□□□□ -0.96
TRAV13-1-201ENST00000390436 AMOTQ4VCS5 1084 aa9.07□□□□□ -0.96
TRAV13-1-201ENST00000390436 PRR5LQ6MZQ0 368 aa9.07□□□□□ -0.96
TRAV13-1-201ENST00000390436 IL17REQ8NFR9 667 aa9.07□□□□□ -0.96
TRAV13-1-201ENST00000390436 ZNF496Q96IT1 587 aaPredicted RBP9.07□□□□□ -0.96
TRAV13-1-201ENST00000390436 TBC1D2BQ9UPU7 963 aa9.07□□□□□ -0.96
TRAV13-1-201ENST00000390436 KDM2BQ8NHM5 1336 aa9.06□□□□□ -0.96
TRAV13-1-201ENST00000390436 FOXN1O15353 648 aa9.06□□□□□ -0.96
TRAV13-1-201ENST00000390436 A1BGP04217 495 aa9.06□□□□□ -0.96
TRAV13-1-201ENST00000390436 AKAP4Q5JQC9 854 aa9.06□□□□□ -0.96
TRAV13-1-201ENST00000390436 C1orf141Q5JVX7 400 aa9.06□□□□□ -0.96
TRAV13-1-201ENST00000390436 MORC1Q86VD1 984 aa9.06□□□□□ -0.96
TRAV13-1-201ENST00000390436 C16orf71Q8IYS4 520 aaPredicted RBP9.06□□□□□ -0.96
TRAV13-1-201ENST00000390436 SMC1BQ8NDV3 1235 aa9.06□□□□□ -0.96
TRAV13-1-201ENST00000390436 MKRN1Q9UHC7 482 aaKnown RBP9.06□□□□□ -0.96
TRAV13-1-201ENST00000390436 ARIH1Q9Y4X5 557 aaPredicted RBP9.06□□□□□ -0.96
TRAV13-1-201ENST00000390436 PER1O15534 1290 aaPredicted RBP9.05□□□□□ -0.96
TRAV13-1-201ENST00000390436 ZPR1O75312 459 aa9.05□□□□□ -0.96
TRAV13-1-201ENST00000390436 VEGFAP15692 232 aaPredicted RBP9.05□□□□□ -0.96
TRAV13-1-201ENST00000390436 C3orf67Q6ZVT6 689 aa9.05□□□□□ -0.96
TRAV13-1-201ENST00000390436 PLPP6Q8IY26 295 aa9.05□□□□□ -0.96
TRAV13-1-201ENST00000390436 TTLL6Q8N841 843 aa9.05□□□□□ -0.96
TRAV13-1-201ENST00000390436 DLG5Q8TDM6 1919 aa9.04□□□□□ -0.96
TRAV13-1-201ENST00000390436 CAMTA2O94983 1202 aa9.04□□□□□ -0.96
TRAV13-1-201ENST00000390436 C7orf43Q8WVR3 580 aa9.04□□□□□ -0.96
TRAV13-1-201ENST00000390436 PHACTR3Q96KR7 559 aa9.04□□□□□ -0.96
TRAV13-1-201ENST00000390436 TAF1P21675 1872 aa9.04□□□□□ -0.96
TRAV13-1-201ENST00000390436 SNED1Q8TER0 1413 aa9.04□□□□□ -0.96
TRAV13-1-201ENST00000390436 PASKQ96RG2 1323 aa9.04□□□□□ -0.96
TRAV13-1-201ENST00000390436 ZNF541Q9H0D2 1346 aa9.04□□□□□ -0.96
TRAV13-1-201ENST00000390436 SCN4AP35499 1836 aa9.03□□□□□ -0.96
TRAV13-1-201ENST00000390436 NUP98P52948 1817 aa9.03□□□□□ -0.96
TRAV13-1-201ENST00000390436 ITGBL1O95965 494 aaPredicted RBP9.03□□□□□ -0.96
TRAV13-1-201ENST00000390436 ZNF622Q969S3 477 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRAV13-1-201ENST00000390436 EMILIN3Q9NT22 766 aa9.03□□□□□ -0.96
TRAV13-1-201ENST00000390436 USP16Q9Y5T5 823 aa9.03□□□□□ -0.96
TRAV13-1-201ENST00000390436 KIF7Q2M1P5 1343 aa9.03□□□□□ -0.96
TRAV13-1-201ENST00000390436 HEG1Q9ULI3 1381 aa9.02□□□□□ -0.97
TRAV13-1-201ENST00000390436 NBPF26B4DH59 902 aa9.02□□□□□ -0.97
TRAV13-1-201ENST00000390436 POTEB2H3BUK9 544 aa9.02□□□□□ -0.97
TRAV13-1-201ENST00000390436 HMGB2P26583 209 aaKnown RBP9.02□□□□□ -0.97
TRAV13-1-201ENST00000390436 CNGB1Q14028 1251 aaPredicted RBP9.02□□□□□ -0.97
TRAV13-1-201ENST00000390436 NBPF10Q6P3W6 841 aaKnown RBP9.02□□□□□ -0.97
TRAV13-1-201ENST00000390436 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
TRAV13-1-201ENST00000390436 H0YIN7 160 aa9.01□□□□□ -0.97
TRAV13-1-201ENST00000390436 SRGNP10124 158 aa9.01□□□□□ -0.97
TRAV13-1-201ENST00000390436 VEGFBP49765 207 aa9.01□□□□□ -0.97
TRAV13-1-201ENST00000390436 ERFEQ4G0M1 354 aa9.01□□□□□ -0.97
TRAV13-1-201ENST00000390436 CC2D1BQ5T0F9 858 aaKnown RBP9.01□□□□□ -0.97
TRAV13-1-201ENST00000390436 PRPF40BQ6NWY9 871 aaKnown RBP9.01□□□□□ -0.97
TRAV13-1-201ENST00000390436 PCGF6Q9BYE7 350 aa9.01□□□□□ -0.97
TRAV13-1-201ENST00000390436 ZNF330Q9Y3S2 320 aaPredicted RBP9.01□□□□□ -0.97
TRAV13-1-201ENST00000390436 CASP8AP2Q9UKL3 1982 aa9.01□□□□□ -0.97
TRAV13-1-201ENST00000390436 COL4A1P02462 1669 aa9□□□□□ -0.97
TRAV13-1-201ENST00000390436 EIF4G2P78344 907 aaKnown RBP eCLIP9□□□□□ -0.97
TRAV13-1-201ENST00000390436 TRIM26Q12899 539 aaPredicted RBP9□□□□□ -0.97
TRAV13-1-201ENST00000390436 ZNF790Q6PG37 636 aa9□□□□□ -0.97
TRAV13-1-201ENST00000390436 ZNF277Q9NRM2 450 aaPredicted RBP9□□□□□ -0.97
TRAV13-1-201ENST00000390436 POLR2AP24928 1970 aaKnown RBP9□□□□□ -0.97
TRAV13-1-201ENST00000390436 ZC3H4Q9UPT8 1303 aaKnown RBP9□□□□□ -0.97
TRAV13-1-201ENST00000390436 TRPM7Q96QT4 1865 aa9□□□□□ -0.97
TRAV13-1-201ENST00000390436 CNTNAP1P78357 1384 aa8.99□□□□□ -0.97
TRAV13-1-201ENST00000390436 CEMIPQ8WUJ3 1361 aa8.99□□□□□ -0.97
TRAV13-1-201ENST00000390436 DCTN1Q14203 1278 aa8.99□□□□□ -0.97
TRAV13-1-201ENST00000390436 HLFQ16534 295 aa8.99□□□□□ -0.97
TRAV13-1-201ENST00000390436 BRIP1Q9BX63 1249 aa8.99□□□□□ -0.97
TRAV13-1-201ENST00000390436 TAF1DQ9H5J8 278 aaPredicted RBP8.99□□□□□ -0.97
TRAV13-1-201ENST00000390436 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.99□□□□□ -0.97
TRAV13-1-201ENST00000390436 LTBP3Q9NS15 1303 aa8.99□□□□□ -0.97
TRAV13-1-201ENST00000390436 LAMB2P55268 1798 aa8.99□□□□□ -0.97
TRAV13-1-201ENST00000390436 ABCC12Q96J65 1359 aa8.99□□□□□ -0.97
TRAV13-1-201ENST00000390436 DPYSL4O14531 572 aa8.98□□□□□ -0.97
TRAV13-1-201ENST00000390436 SEMA3EO15041 775 aa8.98□□□□□ -0.97
TRAV13-1-201ENST00000390436 TNRC18O15417 2968 aaPredicted RBP8.98□□□□□ -0.97
TRAV13-1-201ENST00000390436 THSD7BQ9C0I4 1608 aa8.98□□□□□ -0.97
TRAV13-1-201ENST00000390436 LAMB4A4D0S4 1761 aa8.97□□□□□ -0.97
TRAV13-1-201ENST00000390436 KDM3BQ7LBC6 1761 aa8.97□□□□□ -0.97
TRAV13-1-201ENST00000390436 FAM177BA6PVY3 158 aa8.97□□□□□ -0.97
TRAV13-1-201ENST00000390436 DIAPH1O60610 1272 aaKnown RBP8.97□□□□□ -0.97
TRAV13-1-201ENST00000390436 LBX1P52954 281 aa8.97□□□□□ -0.97
TRAV13-1-201ENST00000390436 MAP1SQ66K74 1059 aaPredicted RBP8.97□□□□□ -0.97
TRAV13-1-201ENST00000390436 DLK2Q6UY11 383 aa8.97□□□□□ -0.97
TRAV13-1-201ENST00000390436 TAOK3Q9H2K8 898 aa8.97□□□□□ -0.97
TRAV13-1-201ENST00000390436 MIS18AQ9NYP9 233 aa8.97□□□□□ -0.97
TRAV13-1-201ENST00000390436 KNSTRNQ9Y448 316 aa8.97□□□□□ -0.97
TRAV13-1-201ENST00000390436 TESPA1A2RU30 521 aaPredicted RBP8.96□□□□□ -0.98
TRAV13-1-201ENST00000390436 KLRG2A4D1S0 409 aaPredicted RBP8.96□□□□□ -0.98
TRAV13-1-201ENST00000390436 HSPA8P11142 646 aaKnown RBP8.96□□□□□ -0.98
TRAV13-1-201ENST00000390436 IL6STP40189 918 aaPredicted RBP8.96□□□□□ -0.98
TRAV13-1-201ENST00000390436 STYK1Q6J9G0 422 aa8.96□□□□□ -0.98
TRAV13-1-201ENST00000390436 MCM10Q7L590 875 aa8.96□□□□□ -0.98
TRAV13-1-201ENST00000390436 DZIP3Q86Y13 1208 aaKnown RBP8.96□□□□□ -0.98
TRAV13-1-201ENST00000390436 RSPH6AQ9H0K4 717 aa8.96□□□□□ -0.98
TRAV13-1-201ENST00000390436 WBP1LQ9NX94 342 aa8.96□□□□□ -0.98
TRAV13-1-201ENST00000390436 RNF123Q5XPI4 1314 aa8.96□□□□□ -0.98
TRAV13-1-201ENST00000390436 GNAT3A8MTJ3 354 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms