RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 ABCC4O15439 1325 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 NEURL1BA8MQ27 555 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 F6X3S4 739 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 SERPINB2P05120 415 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 GPTP24298 496 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 BEND3Q5T5X7 828 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 MSL1Q68DK7 614 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 INTS3Q68E01 1043 aaKnown RBP12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 NLRP10Q86W26 655 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 C9orf78Q9NZ63 289 aaPredicted RBP12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 TRMT112Q9UI30 125 aaKnown RBP12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 PDZRN3Q9UPQ7 1066 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 NUP98P52948 1817 aa12.2□□□□□ -0.46
TRBV20-1-201ENST00000390394 ATP5J2-PTCD1G3V325 749 aa12.19□□□□□ -0.46
TRBV20-1-201ENST00000390394 POLRMTO00411 1230 aaKnown RBP12.19□□□□□ -0.46
TRBV20-1-201ENST00000390394 ZBTB38Q8NAP3 1195 aaPredicted RBP12.19□□□□□ -0.46
TRBV20-1-201ENST00000390394 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
TRBV20-1-201ENST00000390394 ARFGEF2Q9Y6D5 1785 aa12.19□□□□□ -0.46
TRBV20-1-201ENST00000390394 SH3TC1Q8TE82 1336 aa12.18□□□□□ -0.46
TRBV20-1-201ENST00000390394 PCCAP05165 728 aaPredicted RBP12.18□□□□□ -0.46
TRBV20-1-201ENST00000390394 GNAI3P08754 354 aa12.18□□□□□ -0.46
TRBV20-1-201ENST00000390394 GCKRQ14397 625 aa12.18□□□□□ -0.46
TRBV20-1-201ENST00000390394 CLUAP1Q96AJ1 413 aa12.18□□□□□ -0.46
TRBV20-1-201ENST00000390394 PDGFDQ9GZP0 370 aaPredicted RBP12.18□□□□□ -0.46
TRBV20-1-201ENST00000390394 DDX19BQ9UMR2 479 aa12.18□□□□□ -0.46
TRBV20-1-201ENST00000390394 ANKRD36CQ5JPF3 1778 aa12.18□□□□□ -0.46
TRBV20-1-201ENST00000390394 GRM8O00222 908 aa12.17□□□□□ -0.46
TRBV20-1-201ENST00000390394 IGKV5-2P06315 115 aa12.17□□□□□ -0.46
TRBV20-1-201ENST00000390394 PDE6BP35913 854 aa12.17□□□□□ -0.46
TRBV20-1-201ENST00000390394 CWF19L2Q2TBE0 894 aaKnown RBP12.17□□□□□ -0.46
TRBV20-1-201ENST00000390394 SUSD4Q5VX71 490 aa12.17□□□□□ -0.46
TRBV20-1-201ENST00000390394 ITPRIPQ8IWB1 547 aa12.17□□□□□ -0.46
TRBV20-1-201ENST00000390394 UBN2Q6ZU65 1347 aa12.16□□□□□ -0.46
TRBV20-1-201ENST00000390394 CDHR2Q9BYE9 1310 aa12.16□□□□□ -0.46
TRBV20-1-201ENST00000390394 NTSR2O95665 410 aa12.16□□□□□ -0.46
TRBV20-1-201ENST00000390394 PTGER2P43116 358 aa12.16□□□□□ -0.46
TRBV20-1-201ENST00000390394 AAMPQ13685 434 aa12.16□□□□□ -0.46
TRBV20-1-201ENST00000390394 TMEM57Q8N5G2 664 aa12.16□□□□□ -0.46
TRBV20-1-201ENST00000390394 NLRP3Q96P20 1036 aa12.16□□□□□ -0.46
TRBV20-1-201ENST00000390394 SUPT16HQ9Y5B9 1047 aaKnown RBP12.16□□□□□ -0.46
TRBV20-1-201ENST00000390394 FAM177BA6PVY3 158 aa12.15□□□□□ -0.46
TRBV20-1-201ENST00000390394 H7C1W4 665 aa12.15□□□□□ -0.46
TRBV20-1-201ENST00000390394 PLIN1O60240 522 aa12.15□□□□□ -0.46
TRBV20-1-201ENST00000390394 UBTFL1P0CB47 393 aaPredicted RBP12.15□□□□□ -0.46
TRBV20-1-201ENST00000390394 DDR1Q08345 913 aa12.15□□□□□ -0.46
TRBV20-1-201ENST00000390394 MVPQ14764 893 aaKnown RBP12.15□□□□□ -0.46
TRBV20-1-201ENST00000390394 SLC10A5Q5PT55 438 aa12.15□□□□□ -0.46
TRBV20-1-201ENST00000390394 PRR5LQ6MZQ0 368 aa12.15□□□□□ -0.46
TRBV20-1-201ENST00000390394 BRIP1Q9BX63 1249 aa12.15□□□□□ -0.46
TRBV20-1-201ENST00000390394 UTYO14607 1347 aa12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 RIC1Q4ADV7 1423 aa12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 IRS4O14654 1257 aaPredicted RBP12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 PDE8AO60658 829 aa12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 TGFB2P61812 414 aa12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 FAM89AQ96GI7 184 aa12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 SGIP1Q9BQI5 828 aa12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 SYT17Q9BSW7 474 aa12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 CD2APQ9Y5K6 639 aa12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 COL24A1Q17RW2 1714 aa12.14□□□□□ -0.47
TRBV20-1-201ENST00000390394 NEFLP07196 543 aa12.13□□□□□ -0.47
TRBV20-1-201ENST00000390394 PANK1Q8TE04 598 aa12.13□□□□□ -0.47
TRBV20-1-201ENST00000390394 PLA2G12BQ9BX93 195 aa12.13□□□□□ -0.47
TRBV20-1-201ENST00000390394 FHDC1Q9C0D6 1143 aaPredicted RBP12.13□□□□□ -0.47
TRBV20-1-201ENST00000390394 USP44Q9H0E7 712 aa12.13□□□□□ -0.47
TRBV20-1-201ENST00000390394 AFDNP55196 1824 aaKnown RBP12.13□□□□□ -0.47
TRBV20-1-201ENST00000390394 H0YIN7 160 aa12.12□□□□□ -0.47
TRBV20-1-201ENST00000390394 GNAI2P04899 355 aa12.12□□□□□ -0.47
TRBV20-1-201ENST00000390394 ERFEQ4G0M1 354 aa12.12□□□□□ -0.47
TRBV20-1-201ENST00000390394 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
TRBV20-1-201ENST00000390394 NUTM1Q86Y26 1132 aa12.12□□□□□ -0.47
TRBV20-1-201ENST00000390394 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
TRBV20-1-201ENST00000390394 N4BP2Q86UW6 1770 aaPredicted RBP12.12□□□□□ -0.47
TRBV20-1-201ENST00000390394 GOLGB1Q14789 3259 aaKnown RBP12.12□□□□□ -0.47
TRBV20-1-201ENST00000390394 RLBP1P12271 317 aa12.11□□□□□ -0.47
TRBV20-1-201ENST00000390394 ALDH1B1P30837 517 aa12.11□□□□□ -0.47
TRBV20-1-201ENST00000390394 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
TRBV20-1-201ENST00000390394 RPGRQ92834 1020 aaKnown RBP12.11□□□□□ -0.47
TRBV20-1-201ENST00000390394 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
TRBV20-1-201ENST00000390394 C10orf71Q711Q0 1435 aa12.11□□□□□ -0.47
TRBV20-1-201ENST00000390394 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
TRBV20-1-201ENST00000390394 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
TRBV20-1-201ENST00000390394 NBPF7P0C2Y1 421 aaPredicted RBP12.1□□□□□ -0.47
TRBV20-1-201ENST00000390394 CTSWP56202 376 aa12.1□□□□□ -0.47
TRBV20-1-201ENST00000390394 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
TRBV20-1-201ENST00000390394 DDX46Q7L014 1031 aaKnown RBP12.1□□□□□ -0.47
TRBV20-1-201ENST00000390394 RBM17Q96I25 401 aaKnown RBP12.1□□□□□ -0.47
TRBV20-1-201ENST00000390394 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
TRBV20-1-201ENST00000390394 HCLS1P14317 486 aaPredicted RBP12.09□□□□□ -0.47
TRBV20-1-201ENST00000390394 NPR1P16066 1061 aa12.09□□□□□ -0.47
TRBV20-1-201ENST00000390394 CASP7P55210 303 aa12.09□□□□□ -0.47
TRBV20-1-201ENST00000390394 CCDC57Q2TAC2 916 aa12.09□□□□□ -0.47
TRBV20-1-201ENST00000390394 KLHL34Q8N239 644 aa12.09□□□□□ -0.47
TRBV20-1-201ENST00000390394 CNKSR1Q969H4 720 aa12.09□□□□□ -0.47
TRBV20-1-201ENST00000390394 MASTLQ96GX5 879 aa12.09□□□□□ -0.47
TRBV20-1-201ENST00000390394 MEIS3Q99687 375 aa12.09□□□□□ -0.47
TRBV20-1-201ENST00000390394 TNNQ9UQP3 1299 aa12.09□□□□□ -0.47
TRBV20-1-201ENST00000390394 IFIT5Q13325 482 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms