RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 THRAP3Q9Y2W1 955 aaKnown RBP22.13■■□□□ 1.13
ACTN4-202ENST00000390009 SGSM2O43147 1006 aa22.12■■□□□ 1.13
ACTN4-202ENST00000390009 EPB41L2O43491 1005 aaKnown RBP22.12■■□□□ 1.13
ACTN4-202ENST00000390009 TLR7Q9NYK1 1049 aaKnown RBP22.12■■□□□ 1.13
ACTN4-202ENST00000390009 NWD2Q9ULI1 1742 aa22.12■■□□□ 1.13
ACTN4-202ENST00000390009 NUTM2BA6NNL0 878 aaPredicted RBP22.12■■□□□ 1.13
ACTN4-202ENST00000390009 NUTM2EB1AL46 878 aaPredicted RBP22.12■■□□□ 1.13
ACTN4-202ENST00000390009 TOM1O60784 492 aa22.12■■□□□ 1.13
ACTN4-202ENST00000390009 NUTM2AQ8IVF1 878 aaPredicted RBP22.12■■□□□ 1.13
ACTN4-202ENST00000390009 ISCA1Q9BUE6 129 aa22.11■■□□□ 1.13
ACTN4-202ENST00000390009 ANAPC15P60006 121 aa22.1■■□□□ 1.13
ACTN4-202ENST00000390009 KIF6Q6ZMV9 814 aa22.1■■□□□ 1.13
ACTN4-202ENST00000390009 SLC4A9Q96Q91 983 aa22.1■■□□□ 1.13
ACTN4-202ENST00000390009 PALD1Q9ULE6 856 aa22.1■■□□□ 1.13
ACTN4-202ENST00000390009 CIZ1Q9ULV3 898 aaPredicted RBP22.1■■□□□ 1.13
ACTN4-202ENST00000390009 TCIRG1Q13488 830 aa22.1■■□□□ 1.13
ACTN4-202ENST00000390009 EVI5LQ96CN4 794 aa22.1■■□□□ 1.13
ACTN4-202ENST00000390009 FOXD4L1Q9NU39 408 aa22.1■■□□□ 1.13
ACTN4-202ENST00000390009 PRIM1P49642 420 aaKnown RBP22.09■■□□□ 1.13
ACTN4-202ENST00000390009 DDB1Q16531 1140 aa22.09■■□□□ 1.13
ACTN4-202ENST00000390009 CWC27Q6UX04 472 aaKnown RBP22.09■■□□□ 1.13
ACTN4-202ENST00000390009 CHMP3Q9Y3E7 222 aa22.09■■□□□ 1.13
ACTN4-202ENST00000390009 TFCP2Q12800 502 aa22.09■■□□□ 1.13
ACTN4-202ENST00000390009 DIAPH3Q9NSV4 1193 aa22.09■■□□□ 1.13
ACTN4-202ENST00000390009 CYP19A1P11511 503 aaPredicted RBP22.08■■□□□ 1.13
ACTN4-202ENST00000390009 TNNI3KQ59H18 835 aa22.07■■□□□ 1.12
ACTN4-202ENST00000390009 IL17RAQ96F46 866 aa22.07■■□□□ 1.12
ACTN4-202ENST00000390009 FPGT-TNNI3KV9GXZ4 949 aa22.07■■□□□ 1.12
ACTN4-202ENST00000390009 SPATA31A5Q5VU36 1347 aa22.07■■□□□ 1.12
ACTN4-202ENST00000390009 SPATA31A7Q8IWB4 1347 aa22.07■■□□□ 1.12
ACTN4-202ENST00000390009 RAD50Q92878 1312 aa22.07■■□□□ 1.12
ACTN4-202ENST00000390009 TRIM28Q13263 835 aaKnown RBP22.07■■□□□ 1.12
ACTN4-202ENST00000390009 SLIT2O94813 1529 aa22.07■■□□□ 1.12
ACTN4-202ENST00000390009 HSPA4P34932 840 aa22.06■■□□□ 1.12
ACTN4-202ENST00000390009 RUFY2Q8WXA3 655 aa22.06■■□□□ 1.12
ACTN4-202ENST00000390009 MAP3K15Q6ZN16 1313 aa22.06■■□□□ 1.12
ACTN4-202ENST00000390009 NEK4P51957 841 aa22.06■■□□□ 1.12
ACTN4-202ENST00000390009 ARXQ96QS3 562 aa22.06■■□□□ 1.12
ACTN4-202ENST00000390009 LSG1Q9H089 658 aaKnown RBP22.06■■□□□ 1.12
ACTN4-202ENST00000390009 BOLA2Q9H3K6 86 aa22.06■■□□□ 1.12
ACTN4-202ENST00000390009 ANKRD36CQ5JPF3 1778 aa22.05■■□□□ 1.12
ACTN4-202ENST00000390009 DBNLQ9UJU6 430 aaKnown RBP22.05■■□□□ 1.12
ACTN4-202ENST00000390009 KIAA1211Q6ZU35 1233 aa22.04■■□□□ 1.12
ACTN4-202ENST00000390009 ZBTB1Q9Y2K1 713 aa22.04■■□□□ 1.12
ACTN4-202ENST00000390009 GIGYF2Q6Y7W6 1299 aaKnown RBP22.04■■□□□ 1.12
ACTN4-202ENST00000390009 CCDC9Q9Y3X0 531 aaKnown RBP22.04■■□□□ 1.12
ACTN4-202ENST00000390009 MCM4P33991 863 aa22.03■■□□□ 1.12
ACTN4-202ENST00000390009 NUP98P52948 1817 aa22.03■■□□□ 1.12
ACTN4-202ENST00000390009 RAB3GAP1Q15042 981 aa22.03■■□□□ 1.12
ACTN4-202ENST00000390009 ATG9AQ7Z3C6 839 aa22.03■■□□□ 1.12
ACTN4-202ENST00000390009 MARCH10Q8NA82 808 aaPredicted RBP22.03■■□□□ 1.12
ACTN4-202ENST00000390009 HIP1O00291 1037 aa22.02■■□□□ 1.12
ACTN4-202ENST00000390009 PCCAP05165 728 aaPredicted RBP22.02■■□□□ 1.12
ACTN4-202ENST00000390009 BARGINQ6ZT62 677 aa22.02■■□□□ 1.12
ACTN4-202ENST00000390009 ATP5JP18859 108 aa22.01■■□□□ 1.11
ACTN4-202ENST00000390009 HLFQ16534 295 aa22.01■■□□□ 1.11
ACTN4-202ENST00000390009 GSE1Q14687 1217 aa22.01■■□□□ 1.11
ACTN4-202ENST00000390009 A0A0G2JS52 829 aa22■■□□□ 1.11
ACTN4-202ENST00000390009 IL15P40933 162 aaPredicted RBP22■■□□□ 1.11
ACTN4-202ENST00000390009 MCM2P49736 904 aa22■■□□□ 1.11
ACTN4-202ENST00000390009 ZBTB38Q8NAP3 1195 aaPredicted RBP22■■□□□ 1.11
ACTN4-202ENST00000390009 TNPO1Q92973 898 aaKnown RBP22■■□□□ 1.11
ACTN4-202ENST00000390009 FAM89AQ96GI7 184 aa22■■□□□ 1.11
ACTN4-202ENST00000390009 ACSBG1Q96GR2 724 aa22■■□□□ 1.11
ACTN4-202ENST00000390009 DBNDD2Q9BQY9 259 aa22■■□□□ 1.11
ACTN4-202ENST00000390009 FSD1Q9BTV5 496 aa22■■□□□ 1.11
ACTN4-202ENST00000390009 HSP90AB3PQ58FF7 597 aa22■■□□□ 1.11
ACTN4-202ENST00000390009 ZNF594Q96JF6 807 aaPredicted RBP22■■□□□ 1.11
ACTN4-202ENST00000390009 EYA2O00167 538 aa21.99■■□□□ 1.11
ACTN4-202ENST00000390009 IL6STP40189 918 aaPredicted RBP21.99■■□□□ 1.11
ACTN4-202ENST00000390009 PLA2G12BQ9BX93 195 aa21.99■■□□□ 1.11
ACTN4-202ENST00000390009 UBAP1LF5GYI3 381 aa21.98■■□□□ 1.11
ACTN4-202ENST00000390009 LRRC24Q50LG9 513 aa21.98■■□□□ 1.11
ACTN4-202ENST00000390009 FAM227BQ96M60 508 aa21.98■■□□□ 1.11
ACTN4-202ENST00000390009 UPF3BQ9BZI7 483 aaKnown RBP21.98■■□□□ 1.11
ACTN4-202ENST00000390009 SNX14Q9Y5W7 946 aa21.98■■□□□ 1.11
ACTN4-202ENST00000390009 MYH3P11055 1940 aa21.98■■□□□ 1.11
ACTN4-202ENST00000390009 CIAO1O76071 339 aa21.98■■□□□ 1.11
ACTN4-202ENST00000390009 GPTP24298 496 aa21.98■■□□□ 1.11
ACTN4-202ENST00000390009 NMIQ13287 307 aaPredicted RBP21.98■■□□□ 1.11
ACTN4-202ENST00000390009 NLRP10Q86W26 655 aa21.98■■□□□ 1.11
ACTN4-202ENST00000390009 GPR108Q9NPR9 543 aa21.98■■□□□ 1.11
ACTN4-202ENST00000390009 PTH1RQ03431 593 aa21.97■■□□□ 1.11
ACTN4-202ENST00000390009 CCDC57Q2TAC2 916 aa21.97■■□□□ 1.11
ACTN4-202ENST00000390009 TMX3Q96JJ7 454 aa21.97■■□□□ 1.11
ACTN4-202ENST00000390009 CDHR2Q9BYE9 1310 aa21.96■■□□□ 1.11
ACTN4-202ENST00000390009 DZIP3Q86Y13 1208 aaKnown RBP21.96■■□□□ 1.11
ACTN4-202ENST00000390009 IL27Q8NEV9 243 aa21.96■■□□□ 1.11
ACTN4-202ENST00000390009 EDC3Q96F86 508 aaKnown RBP21.96■■□□□ 1.11
ACTN4-202ENST00000390009 CWC22Q9HCG8 908 aaKnown RBP21.96■■□□□ 1.11
ACTN4-202ENST00000390009 SNRKQ9NRH2 765 aa21.96■■□□□ 1.11
ACTN4-202ENST00000390009 CCDC171Q6TFL3 1326 aa21.96■■□□□ 1.11
ACTN4-202ENST00000390009 ERVV-1B6SEH8 477 aa21.95■■□□□ 1.11
ACTN4-202ENST00000390009 RASEFQ8IZ41 740 aa21.95■■□□□ 1.11
ACTN4-202ENST00000390009 TBC1D2BQ9UPU7 963 aa21.95■■□□□ 1.11
ACTN4-202ENST00000390009 ZNF609O15014 1411 aa21.95■■□□□ 1.1
ACTN4-202ENST00000390009 A0A0D9SFI3 127 aa21.95■■□□□ 1.1
ACTN4-202ENST00000390009 CSF1RP07333 972 aa21.95■■□□□ 1.1
ACTN4-202ENST00000390009 ATP6V1AP38606 617 aa21.95■■□□□ 1.1
ACTN4-202ENST00000390009 ZGPATQ8N5A5 531 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms