RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 STAP2Q9UGK3 403 aa12.41□□□□□ -0.42
LTN1-203ENST00000389195 PHLPP1O60346 1717 aa12.41□□□□□ -0.42
LTN1-203ENST00000389195 UTYO14607 1347 aa12.41□□□□□ -0.42
LTN1-203ENST00000389195 HSP90AA1P07900 732 aaKnown RBP12.41□□□□□ -0.42
LTN1-203ENST00000389195 ITPK1Q13572 414 aa12.41□□□□□ -0.42
LTN1-203ENST00000389195 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
LTN1-203ENST00000389195 DBNDD2Q9BQY9 259 aa12.41□□□□□ -0.42
LTN1-203ENST00000389195 FOXD4L5Q5VV16 416 aaPredicted RBP12.4□□□□□ -0.42
LTN1-203ENST00000389195 CASC1Q6TDU7 716 aa12.4□□□□□ -0.42
LTN1-203ENST00000389195 FOXD4L4Q8WXT5 416 aaPredicted RBP12.4□□□□□ -0.42
LTN1-203ENST00000389195 STARD3NLO95772 234 aa12.4□□□□□ -0.42
LTN1-203ENST00000389195 DNAJC2Q99543 621 aaKnown RBP12.4□□□□□ -0.42
LTN1-203ENST00000389195 DBNLQ9UJU6 430 aaKnown RBP12.4□□□□□ -0.42
LTN1-203ENST00000389195 ECHDC1Q9NTX5 307 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 BCL9O00512 1426 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 AK9Q5TCS8 1911 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 H7C1W4 665 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 PKP1Q13835 747 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 DISP2A7MBM2 1401 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 SPATA31A5Q5VU36 1347 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 SPATA31A7Q8IWB4 1347 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 AFDNP55196 1824 aaKnown RBP12.39□□□□□ -0.43
LTN1-203ENST00000389195 NEK4P51957 841 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 PTH1RQ03431 593 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
LTN1-203ENST00000389195 ZGPATQ8N5A5 531 aaKnown RBP12.39□□□□□ -0.43
LTN1-203ENST00000389195 SEC62Q99442 399 aaKnown RBP12.39□□□□□ -0.43
LTN1-203ENST00000389195 ITGB4P16144 1822 aa12.38□□□□□ -0.43
LTN1-203ENST00000389195 HCLS1P14317 486 aaPredicted RBP12.38□□□□□ -0.43
LTN1-203ENST00000389195 BICDL1Q6ZP65 573 aa12.38□□□□□ -0.43
LTN1-203ENST00000389195 DDX46Q7L014 1031 aaKnown RBP12.38□□□□□ -0.43
LTN1-203ENST00000389195 SNRKQ9NRH2 765 aa12.38□□□□□ -0.43
LTN1-203ENST00000389195 HSPA1LP34931 641 aa12.38□□□□□ -0.43
LTN1-203ENST00000389195 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
LTN1-203ENST00000389195 RASEFQ8IZ41 740 aa12.38□□□□□ -0.43
LTN1-203ENST00000389195 HELBQ8NG08 1087 aaPredicted RBP12.38□□□□□ -0.43
LTN1-203ENST00000389195 TAF6LQ9Y6J9 622 aa12.38□□□□□ -0.43
LTN1-203ENST00000389195 ARFGEF2Q9Y6D5 1785 aa12.37□□□□□ -0.43
LTN1-203ENST00000389195 DEKP35659 375 aaKnown RBP12.37□□□□□ -0.43
LTN1-203ENST00000389195 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
LTN1-203ENST00000389195 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
LTN1-203ENST00000389195 LOC102724428A0A0B4J2F2 783 aa12.37□□□□□ -0.43
LTN1-203ENST00000389195 CRKLP46109 303 aaKnown RBP12.37□□□□□ -0.43
LTN1-203ENST00000389195 SIK1P57059 783 aa12.37□□□□□ -0.43
LTN1-203ENST00000389195 PI16Q6UXB8 463 aa12.37□□□□□ -0.43
LTN1-203ENST00000389195 ATG9AQ7Z3C6 839 aa12.37□□□□□ -0.43
LTN1-203ENST00000389195 AMIGO3Q86WK7 504 aa12.37□□□□□ -0.43
LTN1-203ENST00000389195 TCEANC2Q96MN5 208 aa12.37□□□□□ -0.43
LTN1-203ENST00000389195 ABCC6O95255 1503 aa12.37□□□□□ -0.43
LTN1-203ENST00000389195 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 WTIPA6NIX2 430 aaPredicted RBP12.36□□□□□ -0.43
LTN1-203ENST00000389195 REC8O95072 547 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 FOXD4L6Q3SYB3 417 aaPredicted RBP12.36□□□□□ -0.43
LTN1-203ENST00000389195 HSP90AB4PQ58FF6 505 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 HSP90AB3PQ58FF7 597 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 TNNI3KQ59H18 835 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 FOXD4L3Q6VB84 417 aaPredicted RBP12.36□□□□□ -0.43
LTN1-203ENST00000389195 GREM2Q9H772 168 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 TRMT112Q9UI30 125 aaKnown RBP12.36□□□□□ -0.43
LTN1-203ENST00000389195 USP21Q9UK80 565 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 FPGT-TNNI3KV9GXZ4 949 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 UBN2Q6ZU65 1347 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 A0A0D9SFI3 127 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 ADORA1P30542 326 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 INTS5Q6P9B9 1019 aaKnown RBP12.36□□□□□ -0.43
LTN1-203ENST00000389195 CNTROBQ8N137 903 aa12.36□□□□□ -0.43
LTN1-203ENST00000389195 GZF1Q9H116 711 aaPredicted RBP12.36□□□□□ -0.43
LTN1-203ENST00000389195 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
LTN1-203ENST00000389195 AHDC1Q5TGY3 1603 aaPredicted RBP12.35□□□□□ -0.43
LTN1-203ENST00000389195 GLRX3O76003 335 aaKnown RBP12.35□□□□□ -0.43
LTN1-203ENST00000389195 RABL6Q3YEC7 729 aaPredicted RBP12.35□□□□□ -0.43
LTN1-203ENST00000389195 CCDC191Q8NCU4 936 aa12.35□□□□□ -0.43
LTN1-203ENST00000389195 N4BP2Q86UW6 1770 aaPredicted RBP12.35□□□□□ -0.43
LTN1-203ENST00000389195 K7ELQ4 463 aaPredicted RBP12.35□□□□□ -0.43
LTN1-203ENST00000389195 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
LTN1-203ENST00000389195 ZNF589Q86UQ0 364 aaPredicted RBP12.35□□□□□ -0.43
LTN1-203ENST00000389195 NLRP10Q86W26 655 aa12.35□□□□□ -0.43
LTN1-203ENST00000389195 FSD1Q9BTV5 496 aa12.35□□□□□ -0.43
LTN1-203ENST00000389195 ISCA1Q9BUE6 129 aa12.35□□□□□ -0.43
LTN1-203ENST00000389195 COPRSQ9NQ92 184 aa12.35□□□□□ -0.43
LTN1-203ENST00000389195 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
LTN1-203ENST00000389195 MAP3K15Q6ZN16 1313 aa12.35□□□□□ -0.43
LTN1-203ENST00000389195 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
LTN1-203ENST00000389195 MEX3CQ5U5Q3 659 aaKnown RBP12.34□□□□□ -0.43
LTN1-203ENST00000389195 SLC51AQ86UW1 340 aa12.34□□□□□ -0.43
LTN1-203ENST00000389195 ADCK5Q3MIX3 580 aa12.34□□□□□ -0.43
LTN1-203ENST00000389195 GIGYF2Q6Y7W6 1299 aaKnown RBP12.34□□□□□ -0.43
LTN1-203ENST00000389195 PLCH1Q4KWH8 1693 aa12.34□□□□□ -0.43
LTN1-203ENST00000389195 UBR2Q8IWV8 1755 aa12.33□□□□□ -0.43
LTN1-203ENST00000389195 A0A0G2JLW4 131 aa12.33□□□□□ -0.44
LTN1-203ENST00000389195 SGSM2O43147 1006 aa12.33□□□□□ -0.44
LTN1-203ENST00000389195 PRPF40BQ6NWY9 871 aaKnown RBP12.33□□□□□ -0.44
LTN1-203ENST00000389195 AEBP2Q6ZN18 517 aaPredicted RBP12.33□□□□□ -0.44
LTN1-203ENST00000389195 BCL9LQ86UU0 1499 aa12.33□□□□□ -0.44
LTN1-203ENST00000389195 CCDC57Q2TAC2 916 aa12.33□□□□□ -0.44
LTN1-203ENST00000389195 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
LTN1-203ENST00000389195 SUSD4Q5VX71 490 aa12.33□□□□□ -0.44
LTN1-203ENST00000389195 ERC1Q8IUD2 1116 aa12.33□□□□□ -0.44
LTN1-203ENST00000389195 SEC31BQ9NQW1 1179 aa12.33□□□□□ -0.44
LTN1-203ENST00000389195 GOLIM4O00461 696 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms