RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 ZNF516Q92618 1163 aa7.39□□□□□ -1.23
ERCC4-202ENST00000389138 TUT1Q9H6E5 874 aaKnown RBP7.39□□□□□ -1.23
ERCC4-202ENST00000389138 TTF2Q9UNY4 1162 aaKnown RBP7.39□□□□□ -1.23
ERCC4-202ENST00000389138 MED14O60244 1454 aa7.39□□□□□ -1.23
ERCC4-202ENST00000389138 ADGBQ8N7X0 1667 aa7.39□□□□□ -1.23
ERCC4-202ENST00000389138 NUTM2BA6NNL0 878 aaPredicted RBP7.39□□□□□ -1.23
ERCC4-202ENST00000389138 NUTM2EB1AL46 878 aaPredicted RBP7.39□□□□□ -1.23
ERCC4-202ENST00000389138 NUTM2DQ5VT03 806 aaPredicted RBP7.39□□□□□ -1.23
ERCC4-202ENST00000389138 NUTM2AQ8IVF1 878 aaPredicted RBP7.39□□□□□ -1.23
ERCC4-202ENST00000389138 EPS8L1Q8TE68 723 aa7.39□□□□□ -1.23
ERCC4-202ENST00000389138 IL17RAQ96F46 866 aa7.39□□□□□ -1.23
ERCC4-202ENST00000389138 RNF19BQ6ZMZ0 732 aa7.38□□□□□ -1.23
ERCC4-202ENST00000389138 TSC1Q92574 1164 aa7.38□□□□□ -1.23
ERCC4-202ENST00000389138 SLC39A13Q96H72 371 aa7.38□□□□□ -1.23
ERCC4-202ENST00000389138 CCSER2Q9H7U1 834 aa7.38□□□□□ -1.23
ERCC4-202ENST00000389138 PLA2G2EQ9NZK7 142 aa7.38□□□□□ -1.23
ERCC4-202ENST00000389138 NRBP1Q9UHY1 535 aa7.38□□□□□ -1.23
ERCC4-202ENST00000389138 PRC1O43663 620 aa7.37□□□□□ -1.23
ERCC4-202ENST00000389138 GGCXP38435 758 aa7.37□□□□□ -1.23
ERCC4-202ENST00000389138 RINLQ6ZS11 566 aa7.37□□□□□ -1.23
ERCC4-202ENST00000389138 SCYL1Q96KG9 808 aa7.37□□□□□ -1.23
ERCC4-202ENST00000389138 FBXO9Q9UK97 447 aaPredicted RBP7.37□□□□□ -1.23
ERCC4-202ENST00000389138 THRAP3Q9Y2W1 955 aaKnown RBP7.37□□□□□ -1.23
ERCC4-202ENST00000389138 ROBO1Q9Y6N7 1651 aa7.37□□□□□ -1.23
ERCC4-202ENST00000389138 ATP7AQ04656 1500 aa7.37□□□□□ -1.23
ERCC4-202ENST00000389138 ABL1P00519 1130 aa7.37□□□□□ -1.23
ERCC4-202ENST00000389138 P4HBP07237 508 aaKnown RBP7.37□□□□□ -1.23
ERCC4-202ENST00000389138 PDGFRBP09619 1106 aa7.37□□□□□ -1.23
ERCC4-202ENST00000389138 AMOTL1Q8IY63 956 aa7.37□□□□□ -1.23
ERCC4-202ENST00000389138 RAVER1Q8IY67 606 aaKnown RBP7.37□□□□□ -1.23
ERCC4-202ENST00000389138 IER2Q9BTL4 223 aa7.37□□□□□ -1.23
ERCC4-202ENST00000389138 BSDC1Q9NW68 430 aaPredicted RBP7.37□□□□□ -1.23
ERCC4-202ENST00000389138 NPHP4O75161 1426 aaPredicted RBP7.37□□□□□ -1.23
ERCC4-202ENST00000389138 TROQ12816 1431 aaPredicted RBP7.37□□□□□ -1.23
ERCC4-202ENST00000389138 DESI1Q6ICB0 168 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 CABLES1Q8TDN4 633 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 TSR2Q969E8 191 aaKnown RBP7.36□□□□□ -1.23
ERCC4-202ENST00000389138 SLC6A16Q9GZN6 736 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 CFAP69A5D8W1 941 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 TLL1O43897 1013 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 ZNF500O60304 480 aaPredicted RBP7.36□□□□□ -1.23
ERCC4-202ENST00000389138 NEFMP07197 916 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 ARHGAP4P98171 946 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 CTDSPL2Q05D32 466 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 SEMA3FQ13275 785 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 CACTIN-AS1Q8N1I8 211 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 SENP7Q9BQF6 1050 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 MAP3K20Q9NYL2 800 aaKnown RBP7.36□□□□□ -1.23
ERCC4-202ENST00000389138 DCTN4Q9UJW0 460 aa7.36□□□□□ -1.23
ERCC4-202ENST00000389138 ARHGAP35Q9NRY4 1499 aa7.35□□□□□ -1.23
ERCC4-202ENST00000389138 DNAJC6O75061 913 aa7.35□□□□□ -1.23
ERCC4-202ENST00000389138 UBE4AQ14139 1066 aa7.35□□□□□ -1.23
ERCC4-202ENST00000389138 COL19A1Q14993 1142 aa7.35□□□□□ -1.23
ERCC4-202ENST00000389138 CCDC184Q52MB2 194 aa7.35□□□□□ -1.23
ERCC4-202ENST00000389138 FAM160A2Q8N612 972 aaPredicted RBP7.35□□□□□ -1.23
ERCC4-202ENST00000389138 ZNF512BQ96KM6 892 aaPredicted RBP7.35□□□□□ -1.23
ERCC4-202ENST00000389138 TMX4Q9H1E5 349 aaPredicted RBP7.35□□□□□ -1.23
ERCC4-202ENST00000389138 WWC3Q9ULE0 1092 aa7.35□□□□□ -1.23
ERCC4-202ENST00000389138 SYCP2Q9BX26 1530 aa7.35□□□□□ -1.23
ERCC4-202ENST00000389138 KAT6BQ8WYB5 2073 aa7.35□□□□□ -1.23
ERCC4-202ENST00000389138 FAM196BA6NMK8 535 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L15C9J2P7 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L10C9JJH3 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L13C9JLJ4 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L12C9JPN9 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L11C9JVI0 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L21D6R901 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L18D6R9N7 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L22D6RA61 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L17D6RBQ6 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L19D6RCP7 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L20D6RJB6 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 PHLPP1O60346 1717 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 ICMTO60725 284 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 A2MP01023 1474 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 PTMAP06454 111 aaKnown RBP7.34□□□□□ -1.23
ERCC4-202ENST00000389138 JUNDP17535 347 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 XPCQ01831 940 aaPredicted RBP7.34□□□□□ -1.23
ERCC4-202ENST00000389138 LMOD3Q0VAK6 560 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L24Q0WX57 530 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 ODR4Q5SWX8 454 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 SYMPKQ92797 1274 aaKnown RBP7.34□□□□□ -1.23
ERCC4-202ENST00000389138 RNF34Q969K3 372 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 UGGT1Q9NYU2 1555 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 EPB41L2O43491 1005 aaKnown RBP7.34□□□□□ -1.23
ERCC4-202ENST00000389138 MMP16P51512 607 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 PTK7Q13308 1070 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 WDR78Q5VTH9 848 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 MCF2L2Q86YR7 1114 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 DEPDC4Q8N2C3 294 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 NKX2-3Q8TAU0 364 aa7.34□□□□□ -1.23
ERCC4-202ENST00000389138 USP17L3A6NCW0 530 aa7.33□□□□□ -1.24
ERCC4-202ENST00000389138 USP17L4A6NCW7 530 aa7.33□□□□□ -1.24
ERCC4-202ENST00000389138 ENPP3O14638 875 aa7.33□□□□□ -1.24
ERCC4-202ENST00000389138 TNFRSF10BO14763 440 aa7.33□□□□□ -1.24
ERCC4-202ENST00000389138 LIG1P18858 919 aa7.33□□□□□ -1.24
ERCC4-202ENST00000389138 SOX11P35716 441 aa7.33□□□□□ -1.24
ERCC4-202ENST00000389138 DHX8Q14562 1220 aaKnown RBP7.33□□□□□ -1.24
ERCC4-202ENST00000389138 USP17L2Q6R6M4 530 aa7.33□□□□□ -1.24
ERCC4-202ENST00000389138 USP17L1Q7RTZ2 530 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms