RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 TSPYL1Q9H0U9 437 aa17.2■□□□□ 0.34
LRRK1-201ENST00000388948 CTNNBL1Q8WYA6 563 aaPredicted RBP17.2■□□□□ 0.34
LRRK1-201ENST00000388948 CTNNA2P26232 953 aa17.2■□□□□ 0.34
LRRK1-201ENST00000388948 MPNDQ8N594 471 aa17.2■□□□□ 0.34
LRRK1-201ENST00000388948 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
LRRK1-201ENST00000388948 TRAF1Q13077 416 aa17.2■□□□□ 0.34
LRRK1-201ENST00000388948 PPP4R3BQ5MIZ7 849 aa17.2■□□□□ 0.34
LRRK1-201ENST00000388948 COPS6Q7L5N1 327 aa17.2■□□□□ 0.34
LRRK1-201ENST00000388948 EYA3Q99504 573 aa17.2■□□□□ 0.34
LRRK1-201ENST00000388948 FILIP1Q7Z7B0 1213 aa17.2■□□□□ 0.34
LRRK1-201ENST00000388948 NAA16Q6N069 864 aaPredicted RBP17.19■□□□□ 0.34
LRRK1-201ENST00000388948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.19■□□□□ 0.34
LRRK1-201ENST00000388948 CAMK4Q16566 473 aa17.19■□□□□ 0.34
LRRK1-201ENST00000388948 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
LRRK1-201ENST00000388948 ECHDC1Q9NTX5 307 aa17.19■□□□□ 0.34
LRRK1-201ENST00000388948 CHPF2Q9P2E5 772 aa17.19■□□□□ 0.34
LRRK1-201ENST00000388948 FBLN1P23142 703 aa17.19■□□□□ 0.34
LRRK1-201ENST00000388948 AMPD3Q01432 767 aa17.19■□□□□ 0.34
LRRK1-201ENST00000388948 NCOA1Q15788 1441 aa17.19■□□□□ 0.34
LRRK1-201ENST00000388948 DHX29Q7Z478 1369 aaKnown RBP17.18■□□□□ 0.34
LRRK1-201ENST00000388948 IARSP41252 1262 aaKnown RBP17.18■□□□□ 0.34
LRRK1-201ENST00000388948 ARHGAP29Q52LW3 1261 aa17.18■□□□□ 0.34
LRRK1-201ENST00000388948 ATP2B3Q16720 1220 aa17.18■□□□□ 0.34
LRRK1-201ENST00000388948 CCDC174Q6PII3 467 aa17.18■□□□□ 0.34
LRRK1-201ENST00000388948 TNNI2P48788 182 aa17.18■□□□□ 0.34
LRRK1-201ENST00000388948 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.18■□□□□ 0.34
LRRK1-201ENST00000388948 HMGN5P82970 282 aaKnown RBP17.17■□□□□ 0.34
LRRK1-201ENST00000388948 KDM5BQ9UGL1 1544 aa17.17■□□□□ 0.34
LRRK1-201ENST00000388948 ASXL2Q76L83 1435 aa17.17■□□□□ 0.34
LRRK1-201ENST00000388948 PCF11O94913 1555 aaKnown RBP17.17■□□□□ 0.34
LRRK1-201ENST00000388948 NCBP1Q09161 790 aaKnown RBP17.17■□□□□ 0.34
LRRK1-201ENST00000388948 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
LRRK1-201ENST00000388948 UBA7P41226 1012 aa17.17■□□□□ 0.34
LRRK1-201ENST00000388948 TAF3Q5VWG9 929 aa17.17■□□□□ 0.34
LRRK1-201ENST00000388948 SLC4A4Q9Y6R1 1079 aa17.17■□□□□ 0.34
LRRK1-201ENST00000388948 USP16Q9Y5T5 823 aa17.17■□□□□ 0.34
LRRK1-201ENST00000388948 TNNT1P13805 278 aa17.16■□□□□ 0.34
LRRK1-201ENST00000388948 METAP2P50579 478 aaKnown RBP eCLIP17.16■□□□□ 0.34
LRRK1-201ENST00000388948 NCOA7Q8NI08 942 aa17.16■□□□□ 0.34
LRRK1-201ENST00000388948 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
LRRK1-201ENST00000388948 FAM193AP78312 1265 aa17.16■□□□□ 0.34
LRRK1-201ENST00000388948 MAP3K11Q16584 847 aa17.16■□□□□ 0.34
LRRK1-201ENST00000388948 IFIT1BQ5T764 474 aaKnown RBP17.16■□□□□ 0.34
LRRK1-201ENST00000388948 ZNF354CQ86Y25 554 aa17.16■□□□□ 0.34
LRRK1-201ENST00000388948 NFATC2IPQ8NCF5 419 aa17.16■□□□□ 0.34
LRRK1-201ENST00000388948 CNNM3Q8NE01 707 aa17.16■□□□□ 0.34
LRRK1-201ENST00000388948 SLC26A6Q9BXS9 759 aa17.16■□□□□ 0.34
LRRK1-201ENST00000388948 TBCAO75347 108 aaKnown RBP17.16■□□□□ 0.34
LRRK1-201ENST00000388948 TDRD12Q587J7 1177 aaKnown RBP17.15■□□□□ 0.34
LRRK1-201ENST00000388948 SH2B1Q9NRF2 756 aaPredicted RBP17.15■□□□□ 0.34
LRRK1-201ENST00000388948 CCNL1Q9UK58 526 aaPredicted RBP17.15■□□□□ 0.34
LRRK1-201ENST00000388948 RARSP54136 660 aaKnown RBP17.15■□□□□ 0.34
LRRK1-201ENST00000388948 CCDC40Q4G0X9 1142 aa17.15■□□□□ 0.34
LRRK1-201ENST00000388948 PRC1O43663 620 aa17.15■□□□□ 0.34
LRRK1-201ENST00000388948 GSTTP1A0A1W2PQM5 241 aa17.15■□□□□ 0.34
LRRK1-201ENST00000388948 LRSAM1Q6UWE0 723 aa17.15■□□□□ 0.34
LRRK1-201ENST00000388948 WTAPQ15007 396 aa17.15■□□□□ 0.34
LRRK1-201ENST00000388948 ERMNQ8TAM6 284 aa17.15■□□□□ 0.34
LRRK1-201ENST00000388948 PABPN1LA6NDY0 278 aaKnown RBP17.14■□□□□ 0.34
LRRK1-201ENST00000388948 PRKCSHP14314 528 aaPredicted RBP17.14■□□□□ 0.34
LRRK1-201ENST00000388948 AKAP4Q5JQC9 854 aa17.14■□□□□ 0.34
LRRK1-201ENST00000388948 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
LRRK1-201ENST00000388948 SMARCC2Q8TAQ2 1214 aa17.14■□□□□ 0.33
LRRK1-201ENST00000388948 RBM17Q96I25 401 aaKnown RBP17.14■□□□□ 0.33
LRRK1-201ENST00000388948 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
LRRK1-201ENST00000388948 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
LRRK1-201ENST00000388948 HOOK3Q86VS8 718 aa17.14■□□□□ 0.33
LRRK1-201ENST00000388948 RIMS2Q9UQ26 1411 aa17.14■□□□□ 0.33
LRRK1-201ENST00000388948 CCDC178Q5BJE1 867 aa17.14■□□□□ 0.33
LRRK1-201ENST00000388948 MTIF2P46199 727 aaKnown RBP17.14■□□□□ 0.33
LRRK1-201ENST00000388948 DNA2P51530 1060 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 TCHPQ9BT92 498 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 SYNCQ9H7C4 482 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 CNBD1Q8NA66 436 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 ESR2Q92731 530 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
LRRK1-201ENST00000388948 STX6O43752 255 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 SCAF11Q99590 1463 aaKnown RBP17.13■□□□□ 0.33
LRRK1-201ENST00000388948 TAF12Q16514 161 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 GPR162Q16538 588 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 JAG2Q9Y219 1238 aa17.13■□□□□ 0.33
LRRK1-201ENST00000388948 NSD2O96028 1365 aa17.12■□□□□ 0.33
LRRK1-201ENST00000388948 PHACTR2O75167 634 aa17.12■□□□□ 0.33
LRRK1-201ENST00000388948 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
LRRK1-201ENST00000388948 CCDC148Q8NFR7 591 aa17.12■□□□□ 0.33
LRRK1-201ENST00000388948 KRT23Q9C075 422 aa17.12■□□□□ 0.33
LRRK1-201ENST00000388948 EIF6P56537 245 aaKnown RBP17.12■□□□□ 0.33
LRRK1-201ENST00000388948 NBPF7P0C2Y1 421 aaPredicted RBP17.12■□□□□ 0.33
LRRK1-201ENST00000388948 PLCG2P16885 1265 aa17.12■□□□□ 0.33
LRRK1-201ENST00000388948 FERMT1Q9BQL6 677 aa17.12■□□□□ 0.33
LRRK1-201ENST00000388948 ERLIN1O75477 346 aa17.11■□□□□ 0.33
LRRK1-201ENST00000388948 FAM98CQ17RN3 349 aaKnown RBP17.11■□□□□ 0.33
LRRK1-201ENST00000388948 PPFIA3O75145 1194 aa17.11■□□□□ 0.33
LRRK1-201ENST00000388948 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
LRRK1-201ENST00000388948 NOD1Q9Y239 953 aa17.11■□□□□ 0.33
LRRK1-201ENST00000388948 PANK2Q9BZ23 570 aa17.11■□□□□ 0.33
LRRK1-201ENST00000388948 SCAND2PQ9GZW5 306 aaPredicted RBP17.11■□□□□ 0.33
LRRK1-201ENST00000388948 MAGEB6P1A0A0J9YX57 407 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms