RNA–Protein interactions for RNA: ENST00000383018.7

SNRNP25-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SNRNP25, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-202ENST00000383018 PPP1R42Q7Z4L9 355 aa27.1■■□□□ 1.93
SNRNP25-202ENST00000383018 ZNF622Q969S3 477 aaKnown RBP eCLIP27.1■■□□□ 1.933e-8■□□□□ 9.2
SNRNP25-202ENST00000383018 TRIM28Q13263 835 aaKnown RBP27.09■■□□□ 1.93
SNRNP25-202ENST00000383018 ARHGAP27Q6ZUM4 889 aa27.09■■□□□ 1.93
SNRNP25-202ENST00000383018 UTP14AQ9BVJ6 771 aaKnown RBP27.09■■□□□ 1.93
SNRNP25-202ENST00000383018 GTF2E1P29083 439 aaPredicted RBP27.08■■□□□ 1.93
SNRNP25-202ENST00000383018 G2E3Q7L622 706 aa27.08■■□□□ 1.93
SNRNP25-202ENST00000383018 CNKSR1Q969H4 720 aa27.07■■□□□ 1.92
SNRNP25-202ENST00000383018 RNF123Q5XPI4 1314 aa27.07■■□□□ 1.92
SNRNP25-202ENST00000383018 SLC4A2P04920 1241 aa27.06■■□□□ 1.92
SNRNP25-202ENST00000383018 NPR1P16066 1061 aa27.06■■□□□ 1.92
SNRNP25-202ENST00000383018 SLFN5Q08AF3 891 aa27.06■■□□□ 1.92
SNRNP25-202ENST00000383018 C3orf67Q6ZVT6 689 aa27.06■■□□□ 1.92
SNRNP25-202ENST00000383018 SYNE4Q8N205 404 aa27.06■■□□□ 1.92
SNRNP25-202ENST00000383018 C7orf43Q8WVR3 580 aa27.06■■□□□ 1.92
SNRNP25-202ENST00000383018 ADCY9O60503 1353 aa27.06■■□□□ 1.92
SNRNP25-202ENST00000383018 SBF1O95248 1867 aa27.06■■□□□ 1.92
SNRNP25-202ENST00000383018 CACNA1SQ13698 1873 aa27.05■■□□□ 1.92
SNRNP25-202ENST00000383018 ATP5J2-PTCD1G3V325 749 aa27.05■■□□□ 1.92
SNRNP25-202ENST00000383018 RIC3Q7Z5B4 369 aa27.05■■□□□ 1.92
SNRNP25-202ENST00000383018 TRMT2AQ8IZ69 625 aaKnown RBP27.05■■□□□ 1.92
SNRNP25-202ENST00000383018 STK31Q9BXU1 1019 aa27.05■■□□□ 1.92
SNRNP25-202ENST00000383018 ZNF784Q8NCA9 323 aaPredicted RBP27.04■■□□□ 1.92
SNRNP25-202ENST00000383018 E9PSI1 815 aa27.03■■□□□ 1.92
SNRNP25-202ENST00000383018 HOXA10P31260 410 aaPredicted RBP27.03■■□□□ 1.92
SNRNP25-202ENST00000383018 PRPF40BQ6NWY9 871 aaKnown RBP27.03■■□□□ 1.92
SNRNP25-202ENST00000383018 KSR2Q6VAB6 950 aa27.03■■□□□ 1.92
SNRNP25-202ENST00000383018 CDCA7LQ96GN5 454 aa27.03■■□□□ 1.92
SNRNP25-202ENST00000383018 METTL22Q9BUU2 404 aaPredicted RBP27.03■■□□□ 1.92
SNRNP25-202ENST00000383018 TRMT112Q9UI30 125 aaKnown RBP27.02■■□□□ 1.92
SNRNP25-202ENST00000383018 FER1L6Q2WGJ9 1857 aa27.02■■□□□ 1.92
SNRNP25-202ENST00000383018 PI4KAP2A4QPH2 592 aa27.01■■□□□ 1.91
SNRNP25-202ENST00000383018 C21orf2O43822 256 aa27.01■■□□□ 1.91
SNRNP25-202ENST00000383018 DDX58O95786 925 aaKnown RBP27.01■■□□□ 1.91
SNRNP25-202ENST00000383018 PRELPP51888 382 aa27.01■■□□□ 1.91
SNRNP25-202ENST00000383018 PI4KAP1Q8N8J0 262 aa27.01■■□□□ 1.91
SNRNP25-202ENST00000383018 LAMB2P55268 1798 aa27.01■■□□□ 1.91
SNRNP25-202ENST00000383018 SH3TC1Q8TE82 1336 aa27■■□□□ 1.91
SNRNP25-202ENST00000383018 MYD88Q99836 296 aa27■■□□□ 1.91
SNRNP25-202ENST00000383018 MAP3K2Q9Y2U5 619 aa27■■□□□ 1.91
SNRNP25-202ENST00000383018 NFKBIEO00221 500 aa26.99■■□□□ 1.91
SNRNP25-202ENST00000383018 FLIIQ13045 1269 aa26.99■■□□□ 1.91
SNRNP25-202ENST00000383018 ZNF428Q96B54 188 aa26.99■■□□□ 1.91
SNRNP25-202ENST00000383018 NLRP3Q96P20 1036 aa26.99■■□□□ 1.91
SNRNP25-202ENST00000383018 DDX60Q8IY21 1712 aaKnown RBP26.99■■□□□ 1.91
SNRNP25-202ENST00000383018 HCLS1P14317 486 aaPredicted RBP26.98■■□□□ 1.91
SNRNP25-202ENST00000383018 ALDH1B1P30837 517 aa26.98■■□□□ 1.91
SNRNP25-202ENST00000383018 IGKV5-2P06315 115 aa26.97■■□□□ 1.91
SNRNP25-202ENST00000383018 RASSF7Q02833 373 aa26.97■■□□□ 1.91
SNRNP25-202ENST00000383018 CCDC191Q8NCU4 936 aa26.97■■□□□ 1.91
SNRNP25-202ENST00000383018 FAM89AQ96GI7 184 aa26.97■■□□□ 1.91
SNRNP25-202ENST00000383018 CRAMP1Q96RY5 1269 aa26.97■■□□□ 1.91
SNRNP25-202ENST00000383018 CCDC88AQ3V6T2 1871 aa26.96■■□□□ 1.91
SNRNP25-202ENST00000383018 C9orf131Q5VYM1 1079 aa26.96■■□□□ 1.91
SNRNP25-202ENST00000383018 ZNF219Q9P2Y4 722 aaPredicted RBP26.96■■□□□ 1.91
SNRNP25-202ENST00000383018 SNED1Q8TER0 1413 aa26.95■■□□□ 1.9
SNRNP25-202ENST00000383018 ZBTB38Q8NAP3 1195 aaPredicted RBP26.94■■□□□ 1.9
SNRNP25-202ENST00000383018 OLFM4Q6UX06 510 aa26.93■■□□□ 1.9
SNRNP25-202ENST00000383018 RPGRQ92834 1020 aaKnown RBP26.93■■□□□ 1.9
SNRNP25-202ENST00000383018 LTBP3Q9NS15 1303 aa26.92■■□□□ 1.9
SNRNP25-202ENST00000383018 RBM17Q96I25 401 aaKnown RBP26.92■■□□□ 1.9
SNRNP25-202ENST00000383018 CWC25Q9NXE8 425 aaPredicted RBP26.92■■□□□ 1.9
SNRNP25-202ENST00000383018 PCCAP05165 728 aaPredicted RBP26.91■■□□□ 1.9
SNRNP25-202ENST00000383018 SF3B3Q15393 1217 aaKnown RBP26.91■■□□□ 1.9
SNRNP25-202ENST00000383018 SOGA3Q5TF21 947 aa26.91■■□□□ 1.9
SNRNP25-202ENST00000383018 TAF1P21675 1872 aa26.9■■□□□ 1.9
SNRNP25-202ENST00000383018 IRS4O14654 1257 aaPredicted RBP26.9■■□□□ 1.9
SNRNP25-202ENST00000383018 LMNB1P20700 586 aa26.9■■□□□ 1.9
SNRNP25-202ENST00000383018 FKBP5Q13451 457 aaPredicted RBP26.9■■□□□ 1.9
SNRNP25-202ENST00000383018 RTL5Q5HYW3 569 aaPredicted RBP26.9■■□□□ 1.9
SNRNP25-202ENST00000383018 DNAAF4Q8WXU2 420 aa26.9■■□□□ 1.9
SNRNP25-202ENST00000383018 RNF181Q9P0P0 153 aa26.9■■□□□ 1.9
SNRNP25-202ENST00000383018 DICER1Q9UPY3 1922 aaKnown RBP26.89■■□□□ 1.9
SNRNP25-202ENST00000383018 NEURL1BA8MQ27 555 aa26.89■■□□□ 1.9
SNRNP25-202ENST00000383018 CWF19L2Q2TBE0 894 aaKnown RBP26.89■■□□□ 1.9
SNRNP25-202ENST00000383018 CCDC93Q567U6 631 aa26.89■■□□□ 1.9
SNRNP25-202ENST00000383018 SLC51AQ86UW1 340 aa26.89■■□□□ 1.9
SNRNP25-202ENST00000383018 MRPL50Q8N5N7 158 aaKnown RBP26.89■■□□□ 1.9
SNRNP25-202ENST00000383018 ABCC4O15439 1325 aa26.89■■□□□ 1.89
SNRNP25-202ENST00000383018 NEXNQ0ZGT2 675 aa26.87■■□□□ 1.89
SNRNP25-202ENST00000383018 JARID2Q92833 1246 aaPredicted RBP26.87■■□□□ 1.89
SNRNP25-202ENST00000383018 TAOK3Q9H2K8 898 aa26.87■■□□□ 1.89
SNRNP25-202ENST00000383018 H7C1W4 665 aa26.86■■□□□ 1.89
SNRNP25-202ENST00000383018 SSH1Q8WYL5 1049 aa26.86■■□□□ 1.89
SNRNP25-202ENST00000383018 CDHR2Q9BYE9 1310 aa26.86■■□□□ 1.89
SNRNP25-202ENST00000383018 F6X3S4 739 aa26.85■■□□□ 1.89
SNRNP25-202ENST00000383018 CC2D2BQ6DHV5 1058 aa26.85■■□□□ 1.89
SNRNP25-202ENST00000383018 RTKN2Q8IZC4 609 aa26.85■■□□□ 1.89
SNRNP25-202ENST00000383018 LINS1Q8NG48 757 aa26.85■■□□□ 1.89
SNRNP25-202ENST00000383018 COL4A1P02462 1669 aa26.85■■□□□ 1.89
SNRNP25-202ENST00000383018 PPEF1O14829 653 aaPredicted RBP26.84■■□□□ 1.89
SNRNP25-202ENST00000383018 BBOX1O75936 387 aa26.84■■□□□ 1.89
SNRNP25-202ENST00000383018 FKBP4Q02790 459 aaKnown RBP eCLIP26.84■■□□□ 1.89
SNRNP25-202ENST00000383018 GCKRQ14397 625 aa26.84■■□□□ 1.89
SNRNP25-202ENST00000383018 BEND3Q5T5X7 828 aa26.84■■□□□ 1.89
SNRNP25-202ENST00000383018 CASP7P55210 303 aa26.83■■□□□ 1.89
SNRNP25-202ENST00000383018 GRAPQ13588 217 aa26.83■■□□□ 1.89
SNRNP25-202ENST00000383018 DDX46Q7L014 1031 aaKnown RBP26.83■■□□□ 1.89
SNRNP25-202ENST00000383018 GRAPLQ8TC17 118 aaPredicted RBP26.83■■□□□ 1.89
SNRNP25-202ENST00000383018 ATP6V0A2Q9Y487 856 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms