RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 BIRC3Q13489 604 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 CCDC73Q6ZRK6 1079 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 CKAP2LQ8IYA6 745 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 ERO1AQ96HE7 468 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 ZNF830Q96NB3 372 aaPredicted RBP6.63□□□□□ -1.35
RFC1-202ENST00000381897 USP26Q9BXU7 913 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 C1orf115Q9H7X2 142 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 DDX19AQ9NUU7 478 aaKnown RBP6.63□□□□□ -1.35
RFC1-202ENST00000381897 TMEM63CQ9P1W3 806 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 PPME1Q9Y570 386 aa6.63□□□□□ -1.35
RFC1-202ENST00000381897 H3BQV1 296 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 IFFO2Q5TF58 517 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 SPATA17Q96L03 361 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 ATF5Q9Y2D1 282 aaPredicted RBP6.62□□□□□ -1.35
RFC1-202ENST00000381897 TRIM37O94972 964 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 IVLP07476 585 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 USP48Q86UV5 1035 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 RASSF4Q9H2L5 321 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 CABP2Q9NPB3 220 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 CLIP2Q9UDT6 1046 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 TARBP1Q13395 1621 aaKnown RBP6.62□□□□□ -1.35
RFC1-202ENST00000381897 CREB3O43889 395 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 SLU7O95391 586 aaKnown RBP6.62□□□□□ -1.35
RFC1-202ENST00000381897 CFAP58Q5T655 872 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 DDX46Q7L014 1031 aaKnown RBP6.62□□□□□ -1.35
RFC1-202ENST00000381897 DDX27Q96GQ7 796 aaKnown RBP6.62□□□□□ -1.35
RFC1-202ENST00000381897 RBM42Q9BTD8 480 aaKnown RBP6.62□□□□□ -1.35
RFC1-202ENST00000381897 STK26Q9P289 416 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 ADAMTS12P58397 1594 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 KIAA0556O60303 1618 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 BRD1O95696 1058 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 CCDC175P0C221 793 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 PSMA5P28066 241 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 ATICP31939 592 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 PDE6BP35913 854 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 PIP4K2BP78356 416 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 TWISTNBQ3B726 338 aaPredicted RBP6.62□□□□□ -1.35
RFC1-202ENST00000381897 CXorf38Q8TB03 319 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 GPT2Q8TD30 523 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 RPGRQ92834 1020 aaKnown RBP6.62□□□□□ -1.35
RFC1-202ENST00000381897 ZNF594Q96JF6 807 aaPredicted RBP6.62□□□□□ -1.35
RFC1-202ENST00000381897 SPTLC3Q9NUV7 552 aa6.62□□□□□ -1.35
RFC1-202ENST00000381897 ERLIN1O75477 346 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 GTF2A1P52655 376 aaPredicted RBP6.61□□□□□ -1.35
RFC1-202ENST00000381897 PLCB4Q15147 1175 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 SCAND2PQ9GZW5 306 aaPredicted RBP6.61□□□□□ -1.35
RFC1-202ENST00000381897 SH2B1Q9NRF2 756 aaPredicted RBP6.61□□□□□ -1.35
RFC1-202ENST00000381897 TRAK1Q9UPV9 953 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 ADGRL1O94910 1474 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 MAGI2Q86UL8 1455 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 UBAP1LF5GYI3 381 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 FCHSD2O94868 740 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 SRPK1Q96SB4 655 aaKnown RBP6.61□□□□□ -1.35
RFC1-202ENST00000381897 SRRTQ9BXP5 876 aaKnown RBP6.61□□□□□ -1.35
RFC1-202ENST00000381897 WDR7Q9Y4E6 1490 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 CTAGE5O15320 804 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 RAB11FIP3O75154 756 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 ZSCAN22P10073 491 aaPredicted RBP6.61□□□□□ -1.35
RFC1-202ENST00000381897 PDE1CQ14123 709 aaPredicted RBP6.61□□□□□ -1.35
RFC1-202ENST00000381897 ANKRD1Q15327 319 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 ISM2Q6H9L7 571 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 KIF24Q5T7B8 1368 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 SFI1A8K8P3 1242 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 CNTROBQ8N137 903 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 TMC2Q8TDI7 906 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 GLMNQ92990 594 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 TSKSQ9UJT2 592 aa6.61□□□□□ -1.35
RFC1-202ENST00000381897 LONRF3Q496Y0 759 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 BEGAINQ9BUH8 593 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 EFCC1Q9HA90 598 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 TNNQ9UQP3 1299 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 ARHGEF5Q12774 1597 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 CROCC2H7BZ55 1655 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 DUOX2Q9NRD8 1548 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 STX6O43752 255 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 TBC1D12O60347 775 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 GNAI3P08754 354 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 PRKAG2Q9UGJ0 569 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 CTDP1Q9Y5B0 961 aaPredicted RBP6.6□□□□□ -1.35
RFC1-202ENST00000381897 EPB41L2O43491 1005 aaKnown RBP6.6□□□□□ -1.35
RFC1-202ENST00000381897 PRPHP41219 470 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 CCT4P50991 539 aaKnown RBP6.6□□□□□ -1.35
RFC1-202ENST00000381897 SEPT6Q14141 434 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 EAPPQ56P03 285 aaPredicted RBP6.6□□□□□ -1.35
RFC1-202ENST00000381897 CC2D2BQ6DHV5 1058 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 TMEM132EQ6IEE7 984 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 BICDL1Q6ZP65 573 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 CEP57L1Q8IYX8 460 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 RUBCNQ92622 972 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 LRGUKQ96M69 825 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 LRRCC1Q9C099 1032 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 POTEB2H3BUK9 544 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 TRIM66O15016 1216 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 PRR29P0C7W0 189 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 ZGPATQ8N5A5 531 aaKnown RBP6.6□□□□□ -1.35
RFC1-202ENST00000381897 CCDC150Q8NCX0 1101 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 PBXIP1Q96AQ6 731 aa6.6□□□□□ -1.35
RFC1-202ENST00000381897 CBFA2T2O43439 604 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 DHX16O60231 1041 aaKnown RBP6.59□□□□□ -1.35
RFC1-202ENST00000381897 KINO60870 393 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms