RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 PAXIP1Q6ZW49 1069 aaPredicted RBP14.29□□□□□ -0.12
SHOX-203ENST00000381578 PPP1R42Q7Z4L9 355 aa14.29□□□□□ -0.12
SHOX-203ENST00000381578 TTC6Q86TZ1 520 aa14.29□□□□□ -0.12
SHOX-203ENST00000381578 ZNF330Q9Y3S2 320 aaPredicted RBP14.29□□□□□ -0.12
SHOX-203ENST00000381578 ANXA1P04083 346 aa14.28□□□□□ -0.12
SHOX-203ENST00000381578 FLIIQ13045 1269 aa14.28□□□□□ -0.12
SHOX-203ENST00000381578 RUFY3Q7L099 469 aa14.28□□□□□ -0.12
SHOX-203ENST00000381578 TOMM22Q9NS69 142 aa14.28□□□□□ -0.12
SHOX-203ENST00000381578 SPTLC3Q9NUV7 552 aa14.28□□□□□ -0.12
SHOX-203ENST00000381578 CTNNA3Q9UI47 895 aa14.28□□□□□ -0.12
SHOX-203ENST00000381578 PDIA4P13667 645 aaKnown RBP14.28□□□□□ -0.12
SHOX-203ENST00000381578 HDGFL1Q5TGJ6 251 aa14.28□□□□□ -0.12
SHOX-203ENST00000381578 CEP57L1Q8IYX8 460 aa14.28□□□□□ -0.12
SHOX-203ENST00000381578 AOPEPQ8N6M6 819 aa14.28□□□□□ -0.12
SHOX-203ENST00000381578 ZSCAN31Q96LW9 406 aaPredicted RBP14.28□□□□□ -0.12
SHOX-203ENST00000381578 DDX19AQ9NUU7 478 aaKnown RBP14.28□□□□□ -0.12
SHOX-203ENST00000381578 IRX5P78411 483 aaPredicted RBP14.27□□□□□ -0.12
SHOX-203ENST00000381578 AIMP1Q12904 312 aaKnown RBP14.27□□□□□ -0.12
SHOX-203ENST00000381578 CCDC30Q5VVM6 783 aa14.27□□□□□ -0.12
SHOX-203ENST00000381578 PLEKHG1Q9ULL1 1385 aa14.27□□□□□ -0.12
SHOX-203ENST00000381578 TERF2Q15554 542 aa14.27□□□□□ -0.13
SHOX-203ENST00000381578 AACSQ86V21 672 aa14.27□□□□□ -0.13
SHOX-203ENST00000381578 BOLA2Q9H3K6 86 aa14.27□□□□□ -0.13
SHOX-203ENST00000381578 ROBO2Q9HCK4 1378 aa14.27□□□□□ -0.13
SHOX-203ENST00000381578 ACEP12821 1306 aa14.27□□□□□ -0.13
SHOX-203ENST00000381578 SERPINC1P01008 464 aa14.27□□□□□ -0.13
SHOX-203ENST00000381578 PSMA5P28066 241 aa14.27□□□□□ -0.13
SHOX-203ENST00000381578 FBXO38Q6PIJ6 1188 aa14.27□□□□□ -0.13
SHOX-203ENST00000381578 SIRT1Q96EB6 747 aa14.26□□□□□ -0.13
SHOX-203ENST00000381578 NAT10Q9H0A0 1025 aaKnown RBP14.26□□□□□ -0.13
SHOX-203ENST00000381578 CCDC8Q9H0W5 538 aaPredicted RBP14.26□□□□□ -0.13
SHOX-203ENST00000381578 MRVI1Q9Y6F6 885 aa14.26□□□□□ -0.13
SHOX-203ENST00000381578 MYO3AQ8NEV4 1616 aa14.26□□□□□ -0.13
SHOX-203ENST00000381578 USP27XA6NNY8 438 aa14.26□□□□□ -0.13
SHOX-203ENST00000381578 KCNA6P17658 529 aa14.26□□□□□ -0.13
SHOX-203ENST00000381578 MTMR6Q9Y217 621 aa14.26□□□□□ -0.13
SHOX-203ENST00000381578 ARHGEF28Q8N1W1 1705 aaKnown RBP14.26□□□□□ -0.13
SHOX-203ENST00000381578 RTL1A6NKG5 1358 aa14.26□□□□□ -0.13
SHOX-203ENST00000381578 GOLGA6L1Q8N7Z2 621 aa14.26□□□□□ -0.13
SHOX-203ENST00000381578 TMEM51Q9NW97 253 aa14.26□□□□□ -0.13
SHOX-203ENST00000381578 DDX41Q9UJV9 622 aaKnown RBP14.26□□□□□ -0.13
SHOX-203ENST00000381578 NR1I2O75469 434 aa14.25□□□□□ -0.13
SHOX-203ENST00000381578 LARP1Q6PKG0 1096 aaKnown RBP14.25□□□□□ -0.13
SHOX-203ENST00000381578 KRBA2Q6ZNG9 492 aa14.25□□□□□ -0.13
SHOX-203ENST00000381578 RHPN1Q8TCX5 695 aa14.25□□□□□ -0.13
SHOX-203ENST00000381578 KMT5BQ4FZB7 885 aa14.25□□□□□ -0.13
SHOX-203ENST00000381578 CCAR1Q8IX12 1150 aaKnown RBP14.25□□□□□ -0.13
SHOX-203ENST00000381578 CCT2P78371 535 aaKnown RBP14.25□□□□□ -0.13
SHOX-203ENST00000381578 SH2B1Q9NRF2 756 aaPredicted RBP14.25□□□□□ -0.13
SHOX-203ENST00000381578 MYOM1P52179 1685 aa14.25□□□□□ -0.13
SHOX-203ENST00000381578 CCDC171Q6TFL3 1326 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 TEFQ10587 303 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 G3BP1Q13283 466 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHOX-203ENST00000381578 ADCK5Q3MIX3 580 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 CCDC191Q8NCU4 936 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 CWC15Q9P013 229 aaKnown RBP14.24□□□□□ -0.13
SHOX-203ENST00000381578 HSPA4P34932 840 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 LEKR1Q6ZMV7 388 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 GPATCH11Q8N954 259 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 FSIP1Q8NA03 581 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 PTPRCP08575 1304 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 NLRP6P59044 892 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 CFAP100Q494V2 611 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 KIF1BPQ96EK5 621 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 ERO1AQ96HE7 468 aa14.24□□□□□ -0.13
SHOX-203ENST00000381578 STK38Q15208 465 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 CCDC144BQ3MJ40 725 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 HSP90AB2PQ58FF8 381 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 CCDC144CPQ8IYA2 1237 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 ANKRD7Q92527 254 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 RBM8AQ9Y5S9 174 aaKnown RBP14.23□□□□□ -0.13
SHOX-203ENST00000381578 RAD50Q92878 1312 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 TAF7Q15545 349 aaPredicted RBP14.23□□□□□ -0.13
SHOX-203ENST00000381578 ME3Q16798 604 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 AK7Q96M32 723 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 HNRNPH2P55795 449 aaKnown RBP14.23□□□□□ -0.13
SHOX-203ENST00000381578 MCM6Q14566 821 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 PTPN21Q16825 1174 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 BRF1Q92994 677 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 IL25Q9H293 177 aa14.23□□□□□ -0.13
SHOX-203ENST00000381578 LMOD1P29536 600 aaPredicted RBP14.22□□□□□ -0.13
SHOX-203ENST00000381578 ATP8B2P98198 1209 aa14.22□□□□□ -0.13
SHOX-203ENST00000381578 RSPH14Q9UHP6 348 aa14.22□□□□□ -0.13
SHOX-203ENST00000381578 PHACTR2O75167 634 aa14.22□□□□□ -0.13
SHOX-203ENST00000381578 IRX3P78415 501 aaPredicted RBP14.22□□□□□ -0.13
SHOX-203ENST00000381578 RAB11FIP4Q86YS3 637 aa14.22□□□□□ -0.13
SHOX-203ENST00000381578 CFAP45Q9UL16 551 aa14.22□□□□□ -0.13
SHOX-203ENST00000381578 SGSM2O43147 1006 aa14.22□□□□□ -0.13
SHOX-203ENST00000381578 GLRX3O76003 335 aaKnown RBP14.22□□□□□ -0.13
SHOX-203ENST00000381578 PTH1RQ03431 593 aa14.22□□□□□ -0.13
SHOX-203ENST00000381578 ANO10Q9NW15 660 aa14.22□□□□□ -0.13
SHOX-203ENST00000381578 PA2G4Q9UQ80 394 aaKnown RBP14.22□□□□□ -0.13
SHOX-203ENST00000381578 TTC21BQ7Z4L5 1316 aa14.22□□□□□ -0.13
SHOX-203ENST00000381578 FAM135BQ49AJ0 1406 aa14.22□□□□□ -0.13
SHOX-203ENST00000381578 SEC31AO94979 1220 aaKnown RBP14.21□□□□□ -0.13
SHOX-203ENST00000381578 STX1AQ16623 288 aa14.21□□□□□ -0.13
SHOX-203ENST00000381578 CCDC102AQ96A19 550 aa14.21□□□□□ -0.13
SHOX-203ENST00000381578 NPHP3Q7Z494 1330 aa14.21□□□□□ -0.13
SHOX-203ENST00000381578 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
SHOX-203ENST00000381578 JAK2O60674 1132 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms