RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 PI4KAP2A4QPH2 592 aa20.66■□□□□ 0.9
SNRPB-201ENST00000381342 FKBP5Q13451 457 aaPredicted RBP20.66■□□□□ 0.9
SNRPB-201ENST00000381342 TCIRG1Q13488 830 aa20.66■□□□□ 0.9
SNRPB-201ENST00000381342 MRPL50Q8N5N7 158 aaKnown RBP20.66■□□□□ 0.9
SNRPB-201ENST00000381342 PI4KAP1Q8N8J0 262 aa20.66■□□□□ 0.9
SNRPB-201ENST00000381342 ZNF428Q96B54 188 aa20.66■□□□□ 0.9
SNRPB-201ENST00000381342 MAP3K2Q9Y2U5 619 aa20.66■□□□□ 0.9
SNRPB-201ENST00000381342 IBTKQ9P2D0 1353 aaPredicted RBP20.66■□□□□ 0.9
SNRPB-201ENST00000381342 LAMB2P55268 1798 aa20.66■□□□□ 0.9
SNRPB-201ENST00000381342 ABCC12Q96J65 1359 aa20.65■□□□□ 0.9
SNRPB-201ENST00000381342 KSR2Q6VAB6 950 aa20.65■□□□□ 0.9
SNRPB-201ENST00000381342 MYD88Q99836 296 aa20.65■□□□□ 0.9
SNRPB-201ENST00000381342 SMC4Q9NTJ3 1288 aa20.65■□□□□ 0.9
SNRPB-201ENST00000381342 DDX60Q8IY21 1712 aaKnown RBP20.64■□□□□ 0.9
SNRPB-201ENST00000381342 UTRNP46939 3433 aa20.64■□□□□ 0.89
SNRPB-201ENST00000381342 ATP5J2-PTCD1G3V325 749 aa20.64■□□□□ 0.89
SNRPB-201ENST00000381342 ALDH1L2Q3SY69 923 aa20.64■□□□□ 0.89
SNRPB-201ENST00000381342 SUSD4Q5VX71 490 aa20.64■□□□□ 0.89
SNRPB-201ENST00000381342 ZNF526Q8TF50 670 aaPredicted RBP20.64■□□□□ 0.89
SNRPB-201ENST00000381342 NYXQ9GZU5 481 aa20.64■□□□□ 0.89
SNRPB-201ENST00000381342 CACNA1SQ13698 1873 aa20.64■□□□□ 0.89
SNRPB-201ENST00000381342 NTSR2O95665 410 aa20.63■□□□□ 0.89
SNRPB-201ENST00000381342 PARP10Q53GL7 1025 aa20.63■□□□□ 0.89
SNRPB-201ENST00000381342 NLRP10Q86W26 655 aa20.63■□□□□ 0.89
SNRPB-201ENST00000381342 NUTM1Q86Y26 1132 aa20.63■□□□□ 0.89
SNRPB-201ENST00000381342 CNKSR1Q969H4 720 aa20.63■□□□□ 0.89
SNRPB-201ENST00000381342 ISCA1Q9BUE6 129 aa20.63■□□□□ 0.89
SNRPB-201ENST00000381342 RARSP54136 660 aaKnown RBP20.62■□□□□ 0.89
SNRPB-201ENST00000381342 C9orf131Q5VYM1 1079 aa20.62■□□□□ 0.89
SNRPB-201ENST00000381342 METTL22Q9BUU2 404 aaPredicted RBP20.62■□□□□ 0.89
SNRPB-201ENST00000381342 F6X3S4 739 aa20.61■□□□□ 0.89
SNRPB-201ENST00000381342 PPP1R42Q7Z4L9 355 aa20.61■□□□□ 0.89
SNRPB-201ENST00000381342 MASTLQ96GX5 879 aa20.61■□□□□ 0.89
SNRPB-201ENST00000381342 ARFGEF1Q9Y6D6 1849 aa20.61■□□□□ 0.89
SNRPB-201ENST00000381342 ERFEQ4G0M1 354 aa20.6■□□□□ 0.89
SNRPB-201ENST00000381342 STYK1Q6J9G0 422 aa20.6■□□□□ 0.89
SNRPB-201ENST00000381342 DNAAF4Q8WXU2 420 aa20.6■□□□□ 0.89
SNRPB-201ENST00000381342 UTP14AQ9BVJ6 771 aaKnown RBP20.6■□□□□ 0.89
SNRPB-201ENST00000381342 RNF181Q9P0P0 153 aa20.6■□□□□ 0.89
SNRPB-201ENST00000381342 C1QTNF8P60827 252 aa20.59■□□□□ 0.89
SNRPB-201ENST00000381342 RIC1Q4ADV7 1423 aa20.59■□□□□ 0.89
SNRPB-201ENST00000381342 IGKV5-2P06315 115 aa20.58■□□□□ 0.89
SNRPB-201ENST00000381342 NEXNQ0ZGT2 675 aa20.58■□□□□ 0.89
SNRPB-201ENST00000381342 CWF19L2Q2TBE0 894 aaKnown RBP20.58■□□□□ 0.89
SNRPB-201ENST00000381342 ZNF219Q9P2Y4 722 aaPredicted RBP20.58■□□□□ 0.89
SNRPB-201ENST00000381342 TRMT112Q9UI30 125 aaKnown RBP20.58■□□□□ 0.89
SNRPB-201ENST00000381342 GOLGB1Q14789 3259 aaKnown RBP20.58■□□□□ 0.88
SNRPB-201ENST00000381342 PTPRCP08575 1304 aa20.57■□□□□ 0.88
SNRPB-201ENST00000381342 SRGNP10124 158 aa20.57■□□□□ 0.88
SNRPB-201ENST00000381342 NPR1P16066 1061 aa20.57■□□□□ 0.88
SNRPB-201ENST00000381342 TRIM28Q13263 835 aaKnown RBP20.57■□□□□ 0.88
SNRPB-201ENST00000381342 SOGA3Q5TF21 947 aa20.57■□□□□ 0.88
SNRPB-201ENST00000381342 SYNE4Q8N205 404 aa20.57■□□□□ 0.88
SNRPB-201ENST00000381342 RNF123Q5XPI4 1314 aa20.56■□□□□ 0.88
SNRPB-201ENST00000381342 C21orf2O43822 256 aa20.56■□□□□ 0.88
SNRPB-201ENST00000381342 BCAR3O75815 825 aa20.56■□□□□ 0.88
SNRPB-201ENST00000381342 CWC25Q9NXE8 425 aaPredicted RBP20.56■□□□□ 0.88
SNRPB-201ENST00000381342 SH3TC1Q8TE82 1336 aa20.55■□□□□ 0.88
SNRPB-201ENST00000381342 KIF16BQ96L93 1317 aa20.55■□□□□ 0.88
SNRPB-201ENST00000381342 MYH3P11055 1940 aa20.55■□□□□ 0.88
SNRPB-201ENST00000381342 NEURL1BA8MQ27 555 aa20.55■□□□□ 0.88
SNRPB-201ENST00000381342 LMNB1P20700 586 aa20.55■□□□□ 0.88
SNRPB-201ENST00000381342 ALDH1B1P30837 517 aa20.55■□□□□ 0.88
SNRPB-201ENST00000381342 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
SNRPB-201ENST00000381342 SLC4A10Q6U841 1118 aa20.55■□□□□ 0.88
SNRPB-201ENST00000381342 CCDC191Q8NCU4 936 aa20.55■□□□□ 0.88
SNRPB-201ENST00000381342 NOB1Q9ULX3 412 aaKnown RBP20.55■□□□□ 0.88
SNRPB-201ENST00000381342 BRPF1P55201 1214 aaPredicted RBP20.54■□□□□ 0.88
SNRPB-201ENST00000381342 RASSF7Q02833 373 aa20.54■□□□□ 0.88
SNRPB-201ENST00000381342 FAM89AQ96GI7 184 aa20.54■□□□□ 0.88
SNRPB-201ENST00000381342 KDM2BQ8NHM5 1336 aa20.53■□□□□ 0.88
SNRPB-201ENST00000381342 HCLS1P14317 486 aaPredicted RBP20.53■□□□□ 0.88
SNRPB-201ENST00000381342 BEND3Q5T5X7 828 aa20.53■□□□□ 0.88
SNRPB-201ENST00000381342 PRPF40BQ6NWY9 871 aaKnown RBP20.53■□□□□ 0.88
SNRPB-201ENST00000381342 C3orf67Q6ZVT6 689 aa20.53■□□□□ 0.88
SNRPB-201ENST00000381342 LINS1Q8NG48 757 aa20.53■□□□□ 0.88
SNRPB-201ENST00000381342 JARID2Q92833 1246 aaPredicted RBP20.52■□□□□ 0.88
SNRPB-201ENST00000381342 SLX4Q8IY92 1834 aa20.51■□□□□ 0.87
SNRPB-201ENST00000381342 KLRG2A4D1S0 409 aaPredicted RBP20.51■□□□□ 0.87
SNRPB-201ENST00000381342 PCCAP05165 728 aaPredicted RBP20.51■□□□□ 0.87
SNRPB-201ENST00000381342 C16orf71Q8IYS4 520 aaPredicted RBP20.51■□□□□ 0.87
SNRPB-201ENST00000381342 ZBTB38Q8NAP3 1195 aaPredicted RBP20.51■□□□□ 0.87
SNRPB-201ENST00000381342 RPGRQ92834 1020 aaKnown RBP20.51■□□□□ 0.87
SNRPB-201ENST00000381342 FRAT1Q92837 279 aaPredicted RBP20.51■□□□□ 0.87
SNRPB-201ENST00000381342 TAF1P21675 1872 aa20.51■□□□□ 0.87
SNRPB-201ENST00000381342 GCKRQ14397 625 aa20.5■□□□□ 0.87
SNRPB-201ENST00000381342 SLC10A5Q5PT55 438 aa20.5■□□□□ 0.87
SNRPB-201ENST00000381342 TAOK3Q9H2K8 898 aa20.5■□□□□ 0.87
SNRPB-201ENST00000381342 ZC3H4Q9UPT8 1303 aaKnown RBP20.5■□□□□ 0.87
SNRPB-201ENST00000381342 IRS4O14654 1257 aaPredicted RBP20.49■□□□□ 0.87
SNRPB-201ENST00000381342 CRY2Q49AN0 593 aa20.49■□□□□ 0.87
SNRPB-201ENST00000381342 CCDC93Q567U6 631 aa20.49■□□□□ 0.87
SNRPB-201ENST00000381342 NLRP3Q96P20 1036 aa20.49■□□□□ 0.87
SNRPB-201ENST00000381342 SRCIN1Q9C0H9 1055 aa20.49■□□□□ 0.87
SNRPB-201ENST00000381342 UBE3BQ7Z3V4 1068 aa20.48■□□□□ 0.87
SNRPB-201ENST00000381342 API5Q9BZZ5 524 aaKnown RBP20.48■□□□□ 0.87
SNRPB-201ENST00000381342 TMX4Q9H1E5 349 aaPredicted RBP20.48■□□□□ 0.87
SNRPB-201ENST00000381342 TNNQ9UQP3 1299 aa20.48■□□□□ 0.87
SNRPB-201ENST00000381342 CDHR2Q9BYE9 1310 aa20.48■□□□□ 0.87
SNRPB-201ENST00000381342 COL4A1P02462 1669 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms