RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ECHDC1Q9NTX5 307 aa17.31■□□□□ 0.36
CLCN4-201ENST00000380829 CASP7P55210 303 aa17.3■□□□□ 0.36
CLCN4-201ENST00000380829 DNAJC10Q8IXB1 793 aa17.3■□□□□ 0.36
CLCN4-201ENST00000380829 ATG3Q9NT62 314 aa17.3■□□□□ 0.36
CLCN4-201ENST00000380829 RBM10P98175 930 aaKnown RBP17.3■□□□□ 0.36
CLCN4-201ENST00000380829 TLR7Q9NYK1 1049 aaKnown RBP17.3■□□□□ 0.36
CLCN4-201ENST00000380829 PRDM4Q9UKN5 801 aa17.3■□□□□ 0.36
CLCN4-201ENST00000380829 AK9Q5TCS8 1911 aa17.3■□□□□ 0.36
CLCN4-201ENST00000380829 DDIT3P35638 169 aa17.29■□□□□ 0.36
CLCN4-201ENST00000380829 SYTL4Q96C24 671 aaPredicted RBP17.29■□□□□ 0.36
CLCN4-201ENST00000380829 GPATCH3Q96I76 525 aa17.29■□□□□ 0.36
CLCN4-201ENST00000380829 EXOC5O00471 708 aa17.29■□□□□ 0.36
CLCN4-201ENST00000380829 RABL6Q3YEC7 729 aaPredicted RBP17.29■□□□□ 0.36
CLCN4-201ENST00000380829 PALD1Q9ULE6 856 aa17.29■□□□□ 0.36
CLCN4-201ENST00000380829 NUP188Q5SRE5 1749 aa17.29■□□□□ 0.36
CLCN4-201ENST00000380829 KAT6BQ8WYB5 2073 aa17.28■□□□□ 0.36
CLCN4-201ENST00000380829 RFX5P48382 616 aaPredicted RBP17.28■□□□□ 0.36
CLCN4-201ENST00000380829 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
CLCN4-201ENST00000380829 PTPN12Q05209 780 aaKnown RBP17.28■□□□□ 0.36
CLCN4-201ENST00000380829 GAS2L3Q86XJ1 694 aa17.28■□□□□ 0.36
CLCN4-201ENST00000380829 CWC25Q9NXE8 425 aaPredicted RBP17.28■□□□□ 0.36
CLCN4-201ENST00000380829 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
CLCN4-201ENST00000380829 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
CLCN4-201ENST00000380829 NUTM2AQ8IVF1 878 aaPredicted RBP17.28■□□□□ 0.36
CLCN4-201ENST00000380829 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
CLCN4-201ENST00000380829 LMBR1LQ6UX01 489 aa17.27■□□□□ 0.36
CLCN4-201ENST00000380829 COPRSQ9NQ92 184 aa17.27■□□□□ 0.36
CLCN4-201ENST00000380829 ITGB4P16144 1822 aa17.27■□□□□ 0.36
CLCN4-201ENST00000380829 H7C1W4 665 aa17.27■□□□□ 0.35
CLCN4-201ENST00000380829 CWC27Q6UX04 472 aaKnown RBP17.27■□□□□ 0.35
CLCN4-201ENST00000380829 PHLPP1O60346 1717 aa17.27■□□□□ 0.35
CLCN4-201ENST00000380829 ST18O60284 1047 aa17.26■□□□□ 0.35
CLCN4-201ENST00000380829 COL15A1P39059 1388 aa17.26■□□□□ 0.35
CLCN4-201ENST00000380829 SGSM2O43147 1006 aa17.26■□□□□ 0.35
CLCN4-201ENST00000380829 MCCP23508 829 aa17.26■□□□□ 0.35
CLCN4-201ENST00000380829 BCL9O00512 1426 aa17.26■□□□□ 0.35
CLCN4-201ENST00000380829 PLCH1Q4KWH8 1693 aa17.25■□□□□ 0.35
CLCN4-201ENST00000380829 FOXO4P98177 505 aa17.25■□□□□ 0.35
CLCN4-201ENST00000380829 TFCP2Q12800 502 aa17.25■□□□□ 0.35
CLCN4-201ENST00000380829 CCDC191Q8NCU4 936 aa17.25■□□□□ 0.35
CLCN4-201ENST00000380829 SLC4A9Q96Q91 983 aa17.25■□□□□ 0.35
CLCN4-201ENST00000380829 A0A0G2JS52 829 aa17.24■□□□□ 0.35
CLCN4-201ENST00000380829 NEK4P51957 841 aa17.24■□□□□ 0.35
CLCN4-201ENST00000380829 ARID3AQ99856 593 aa17.24■□□□□ 0.35
CLCN4-201ENST00000380829 TEX13AQ9BXU3 409 aaPredicted RBP17.24■□□□□ 0.35
CLCN4-201ENST00000380829 TJP1Q07157 1748 aa17.24■□□□□ 0.35
CLCN4-201ENST00000380829 STARD3NLO95772 234 aa17.23■□□□□ 0.35
CLCN4-201ENST00000380829 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
CLCN4-201ENST00000380829 BOLA2Q9H3K6 86 aa17.23■□□□□ 0.35
CLCN4-201ENST00000380829 DIAPH3Q9NSV4 1193 aa17.23■□□□□ 0.35
CLCN4-201ENST00000380829 SPATA31A1Q5TZJ5 1347 aa17.23■□□□□ 0.35
CLCN4-201ENST00000380829 EVI5LQ96CN4 794 aa17.22■□□□□ 0.35
CLCN4-201ENST00000380829 TCIRG1Q13488 830 aa17.22■□□□□ 0.35
CLCN4-201ENST00000380829 KIF6Q6ZMV9 814 aa17.22■□□□□ 0.35
CLCN4-201ENST00000380829 CIZ1Q9ULV3 898 aaPredicted RBP17.22■□□□□ 0.35
CLCN4-201ENST00000380829 DDX11L8A8MPP1 907 aa17.21■□□□□ 0.35
CLCN4-201ENST00000380829 TNNI3KQ59H18 835 aa17.21■□□□□ 0.35
CLCN4-201ENST00000380829 ISCA1Q9BUE6 129 aa17.21■□□□□ 0.35
CLCN4-201ENST00000380829 LSG1Q9H089 658 aaKnown RBP17.21■□□□□ 0.35
CLCN4-201ENST00000380829 FPGT-TNNI3KV9GXZ4 949 aa17.21■□□□□ 0.35
CLCN4-201ENST00000380829 WNK3Q9BYP7 1800 aa17.21■□□□□ 0.35
CLCN4-201ENST00000380829 RAD50Q92878 1312 aa17.21■□□□□ 0.35
CLCN4-201ENST00000380829 ANAPC15P60006 121 aa17.21■□□□□ 0.35
CLCN4-201ENST00000380829 DDB1Q16531 1140 aa17.21■□□□□ 0.35
CLCN4-201ENST00000380829 DBNLQ9UJU6 430 aaKnown RBP17.21■□□□□ 0.35
CLCN4-201ENST00000380829 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
CLCN4-201ENST00000380829 HSPA4P34932 840 aa17.2■□□□□ 0.34
CLCN4-201ENST00000380829 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
CLCN4-201ENST00000380829 UPF3BQ9BZI7 483 aaKnown RBP17.2■□□□□ 0.34
CLCN4-201ENST00000380829 LRP6O75581 1613 aa17.2■□□□□ 0.34
CLCN4-201ENST00000380829 CYP19A1P11511 503 aaPredicted RBP17.2■□□□□ 0.34
CLCN4-201ENST00000380829 RAB3GAP1Q15042 981 aa17.2■□□□□ 0.34
CLCN4-201ENST00000380829 FAM13BQ9NYF5 915 aa17.2■□□□□ 0.34
CLCN4-201ENST00000380829 ZBTB1Q9Y2K1 713 aa17.2■□□□□ 0.34
CLCN4-201ENST00000380829 NRAPQ86VF7 1730 aa17.2■□□□□ 0.34
CLCN4-201ENST00000380829 NOL8Q76FK4 1167 aaKnown RBP17.19■□□□□ 0.34
CLCN4-201ENST00000380829 ACSBG1Q96GR2 724 aa17.19■□□□□ 0.34
CLCN4-201ENST00000380829 ZNF594Q96JF6 807 aaPredicted RBP17.19■□□□□ 0.34
CLCN4-201ENST00000380829 DOT1LQ8TEK3 1739 aa17.19■□□□□ 0.34
CLCN4-201ENST00000380829 TOM1O60784 492 aa17.19■□□□□ 0.34
CLCN4-201ENST00000380829 HLFQ16534 295 aa17.19■□□□□ 0.34
CLCN4-201ENST00000380829 RUFY2Q8WXA3 655 aa17.19■□□□□ 0.34
CLCN4-201ENST00000380829 EDC3Q96F86 508 aaKnown RBP17.19■□□□□ 0.34
CLCN4-201ENST00000380829 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.18■□□□□ 0.34
CLCN4-201ENST00000380829 ZGPATQ8N5A5 531 aaKnown RBP17.18■□□□□ 0.34
CLCN4-201ENST00000380829 FBXO41Q8TF61 875 aa17.18■□□□□ 0.34
CLCN4-201ENST00000380829 FAM89AQ96GI7 184 aa17.18■□□□□ 0.34
CLCN4-201ENST00000380829 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
CLCN4-201ENST00000380829 DBNDD2Q9BQY9 259 aa17.18■□□□□ 0.34
CLCN4-201ENST00000380829 NDUFB9Q9Y6M9 179 aa17.18■□□□□ 0.34
CLCN4-201ENST00000380829 MAP3K15Q6ZN16 1313 aa17.18■□□□□ 0.34
CLCN4-201ENST00000380829 EPB41L2O43491 1005 aaKnown RBP17.18■□□□□ 0.34
CLCN4-201ENST00000380829 ATG9AQ7Z3C6 839 aa17.18■□□□□ 0.34
CLCN4-201ENST00000380829 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
CLCN4-201ENST00000380829 CDCA7Q9BWT1 371 aaPredicted RBP17.18■□□□□ 0.34
CLCN4-201ENST00000380829 THRAP3Q9Y2W1 955 aaKnown RBP17.18■□□□□ 0.34
CLCN4-201ENST00000380829 GPTP24298 496 aa17.17■□□□□ 0.34
CLCN4-201ENST00000380829 PTH1RQ03431 593 aa17.17■□□□□ 0.34
CLCN4-201ENST00000380829 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
CLCN4-201ENST00000380829 SSFA2P28290 1259 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms