RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 CA12O43570 354 aa11.59□□□□□ -0.55
PMS2-202ENST00000380416 CRKLP46109 303 aaKnown RBP11.59□□□□□ -0.55
PMS2-202ENST00000380416 SLC39A6Q13433 755 aa11.59□□□□□ -0.55
PMS2-202ENST00000380416 PHACTR3Q96KR7 559 aa11.59□□□□□ -0.55
PMS2-202ENST00000380416 SRP68Q9UHB9 627 aaKnown RBP11.59□□□□□ -0.55
PMS2-202ENST00000380416 ABT1Q9ULW3 272 aaKnown RBP11.59□□□□□ -0.55
PMS2-202ENST00000380416 PCDHB8Q9UN66 801 aa11.59□□□□□ -0.55
PMS2-202ENST00000380416 PCDHB13Q9Y5F0 798 aa11.59□□□□□ -0.55
PMS2-202ENST00000380416 TM4SF1P30408 202 aa11.58□□□□□ -0.56
PMS2-202ENST00000380416 ECE1P42892 770 aa11.58□□□□□ -0.56
PMS2-202ENST00000380416 RTF1Q92541 710 aaKnown RBP11.58□□□□□ -0.56
PMS2-202ENST00000380416 GPR101Q96P66 508 aaPredicted RBP11.58□□□□□ -0.56
PMS2-202ENST00000380416 LTBP3Q9NS15 1303 aa11.58□□□□□ -0.56
PMS2-202ENST00000380416 TRPM7Q96QT4 1865 aa11.57□□□□□ -0.56
PMS2-202ENST00000380416 DLG5Q8TDM6 1919 aa11.57□□□□□ -0.56
PMS2-202ENST00000380416 DNAJC10Q8IXB1 793 aa11.57□□□□□ -0.56
PMS2-202ENST00000380416 IL17REQ8NFR9 667 aa11.57□□□□□ -0.56
PMS2-202ENST00000380416 CEMIPQ8WUJ3 1361 aa11.56□□□□□ -0.56
PMS2-202ENST00000380416 COL11A2P13942 1736 aaPredicted RBP11.56□□□□□ -0.56
PMS2-202ENST00000380416 HABP4Q5JVS0 413 aaKnown RBP11.56□□□□□ -0.56
PMS2-202ENST00000380416 CYP4F22Q6NT55 531 aa11.56□□□□□ -0.56
PMS2-202ENST00000380416 CNTROBQ8N137 903 aa11.56□□□□□ -0.56
PMS2-202ENST00000380416 PNNQ9H307 717 aaKnown RBP11.56□□□□□ -0.56
PMS2-202ENST00000380416 MAP3K13O43283 966 aa11.55□□□□□ -0.56
PMS2-202ENST00000380416 MAP2K2P36507 400 aa11.55□□□□□ -0.56
PMS2-202ENST00000380416 EAPPQ56P03 285 aaPredicted RBP11.55□□□□□ -0.56
PMS2-202ENST00000380416 MAP1SQ66K74 1059 aaPredicted RBP11.55□□□□□ -0.56
PMS2-202ENST00000380416 ZNF790Q6PG37 636 aa11.55□□□□□ -0.56
PMS2-202ENST00000380416 MYBBP1AQ9BQG0 1328 aaKnown RBP11.55□□□□□ -0.56
PMS2-202ENST00000380416 MAPK8IP3Q9UPT6 1336 aa11.55□□□□□ -0.56
PMS2-202ENST00000380416 ANKRD31Q8N7Z5 1873 aa11.55□□□□□ -0.56
PMS2-202ENST00000380416 BTBD11A6QL63 1104 aa11.54□□□□□ -0.56
PMS2-202ENST00000380416 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
PMS2-202ENST00000380416 STARD3NLO95772 234 aa11.54□□□□□ -0.56
PMS2-202ENST00000380416 CYP19A1P11511 503 aaPredicted RBP11.54□□□□□ -0.56
PMS2-202ENST00000380416 PSEN1P49768 467 aa11.54□□□□□ -0.56
PMS2-202ENST00000380416 INTS5Q6P9B9 1019 aaKnown RBP11.54□□□□□ -0.56
PMS2-202ENST00000380416 MCM10Q7L590 875 aa11.54□□□□□ -0.56
PMS2-202ENST00000380416 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
PMS2-202ENST00000380416 DDX21Q9NR30 783 aaKnown RBP eCLIP11.54□□□□□ -0.56
PMS2-202ENST00000380416 RYDENQ9NUL5 291 aaKnown RBP11.54□□□□□ -0.56
PMS2-202ENST00000380416 ARFGEF2Q9Y6D5 1785 aa11.54□□□□□ -0.56
PMS2-202ENST00000380416 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
PMS2-202ENST00000380416 HEG1Q9ULI3 1381 aa11.54□□□□□ -0.56
PMS2-202ENST00000380416 AOC2O75106 756 aa11.53□□□□□ -0.56
PMS2-202ENST00000380416 ZNF496Q96IT1 587 aaPredicted RBP11.53□□□□□ -0.56
PMS2-202ENST00000380416 FMNL2Q96PY5 1086 aa11.53□□□□□ -0.56
PMS2-202ENST00000380416 TAOK3Q9H2K8 898 aa11.53□□□□□ -0.56
PMS2-202ENST00000380416 SOS1Q07889 1333 aaPredicted RBP11.53□□□□□ -0.56
PMS2-202ENST00000380416 COL15A1P39059 1388 aa11.53□□□□□ -0.56
PMS2-202ENST00000380416 ZPR1O75312 459 aa11.52□□□□□ -0.57
PMS2-202ENST00000380416 EPHX2P34913 555 aa11.52□□□□□ -0.57
PMS2-202ENST00000380416 BRPF1P55201 1214 aaPredicted RBP11.52□□□□□ -0.57
PMS2-202ENST00000380416 GRM1Q13255 1194 aa11.52□□□□□ -0.57
PMS2-202ENST00000380416 PNMA8AQ86V59 439 aaPredicted RBP11.52□□□□□ -0.57
PMS2-202ENST00000380416 C2CD5Q86YS7 1000 aa11.52□□□□□ -0.57
PMS2-202ENST00000380416 TEX13AQ9BXU3 409 aaPredicted RBP11.52□□□□□ -0.57
PMS2-202ENST00000380416 HACL1Q9UJ83 578 aa11.52□□□□□ -0.57
PMS2-202ENST00000380416 ZBTB1Q9Y2K1 713 aa11.52□□□□□ -0.57
PMS2-202ENST00000380416 CACNA1SQ13698 1873 aa11.51□□□□□ -0.57
PMS2-202ENST00000380416 C21orf2O43822 256 aa11.51□□□□□ -0.57
PMS2-202ENST00000380416 CANXP27824 592 aaKnown RBP11.51□□□□□ -0.57
PMS2-202ENST00000380416 DCTN1Q14203 1278 aa11.51□□□□□ -0.57
PMS2-202ENST00000380416 NBPF15Q8N660 670 aa11.51□□□□□ -0.57
PMS2-202ENST00000380416 PLEKHF1Q96S99 279 aa11.51□□□□□ -0.57
PMS2-202ENST00000380416 TLL2Q9Y6L7 1015 aa11.51□□□□□ -0.57
PMS2-202ENST00000380416 SCN7AQ01118 1682 aa11.5□□□□□ -0.57
PMS2-202ENST00000380416 LAMB4A4D0S4 1761 aa11.5□□□□□ -0.57
PMS2-202ENST00000380416 KDM3BQ7LBC6 1761 aa11.5□□□□□ -0.57
PMS2-202ENST00000380416 H0YIN7 160 aa11.5□□□□□ -0.57
PMS2-202ENST00000380416 FXR1P51114 621 aaKnown RBP eCLIP11.5□□□□□ -0.57
PMS2-202ENST00000380416 NFIXQ14938 502 aa11.5□□□□□ -0.57
PMS2-202ENST00000380416 NFE2L2Q16236 605 aa11.5□□□□□ -0.57
PMS2-202ENST00000380416 USPL1Q5W0Q7 1092 aa11.5□□□□□ -0.57
PMS2-202ENST00000380416 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
PMS2-202ENST00000380416 METRNQ9UJH8 293 aa11.5□□□□□ -0.57
PMS2-202ENST00000380416 SLX4Q8IY92 1834 aa11.5□□□□□ -0.57
PMS2-202ENST00000380416 A0A087WZG4 1122 aa11.49□□□□□ -0.57
PMS2-202ENST00000380416 DLL1O00548 723 aa11.49□□□□□ -0.57
PMS2-202ENST00000380416 KCNQ3O43525 872 aa11.49□□□□□ -0.57
PMS2-202ENST00000380416 WDR43Q15061 677 aaKnown RBP eCLIP11.49□□□□□ -0.57
PMS2-202ENST00000380416 NARFQ9UHQ1 456 aa11.49□□□□□ -0.57
PMS2-202ENST00000380416 ZNF330Q9Y3S2 320 aaPredicted RBP11.49□□□□□ -0.57
PMS2-202ENST00000380416 ZNF541Q9H0D2 1346 aa11.49□□□□□ -0.57
PMS2-202ENST00000380416 FMR1Q06787 632 aaKnown RBP eCLIP11.48□□□□□ -0.57
PMS2-202ENST00000380416 TAF7Q15545 349 aaPredicted RBP11.48□□□□□ -0.57
PMS2-202ENST00000380416 CST9Q5W186 159 aa11.48□□□□□ -0.57
PMS2-202ENST00000380416 ASTLQ6HA08 431 aaPredicted RBP11.48□□□□□ -0.57
PMS2-202ENST00000380416 PNISRQ8TF01 805 aaKnown RBP11.48□□□□□ -0.57
PMS2-202ENST00000380416 PRKRIP1Q9H875 184 aaPredicted RBP11.48□□□□□ -0.57
PMS2-202ENST00000380416 RNF123Q5XPI4 1314 aa11.48□□□□□ -0.57
PMS2-202ENST00000380416 BCORQ6W2J9 1755 aa11.47□□□□□ -0.57
PMS2-202ENST00000380416 SERPINB2P05120 415 aa11.47□□□□□ -0.57
PMS2-202ENST00000380416 SNRPA1P09661 255 aaKnown RBP11.47□□□□□ -0.57
PMS2-202ENST00000380416 EIF5P55010 431 aaKnown RBP11.47□□□□□ -0.57
PMS2-202ENST00000380416 LMOD3Q0VAK6 560 aa11.47□□□□□ -0.57
PMS2-202ENST00000380416 MKI67P46013 3256 aaKnown RBP11.47□□□□□ -0.57
PMS2-202ENST00000380416 ATMINO43313 823 aaPredicted RBP11.46□□□□□ -0.57
PMS2-202ENST00000380416 C7P10643 843 aa11.46□□□□□ -0.57
PMS2-202ENST00000380416 IL6STP40189 918 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms