RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 DDIT3P35638 169 aa14.6□□□□□ -0.07
USP3-202ENST00000380324 COPRSQ9NQ92 184 aa14.6□□□□□ -0.07
USP3-202ENST00000380324 DIAPH3Q9NSV4 1193 aa14.59□□□□□ -0.07
USP3-202ENST00000380324 CCDC9Q9Y3X0 531 aaKnown RBP14.59□□□□□ -0.07
USP3-202ENST00000380324 H7C1W4 665 aa14.59□□□□□ -0.07
USP3-202ENST00000380324 SGSM2O43147 1006 aa14.59□□□□□ -0.07
USP3-202ENST00000380324 STARD3NLO95772 234 aa14.59□□□□□ -0.07
USP3-202ENST00000380324 TFCP2Q12800 502 aa14.59□□□□□ -0.07
USP3-202ENST00000380324 KIF6Q6ZMV9 814 aa14.59□□□□□ -0.07
USP3-202ENST00000380324 SPATA31A1Q5TZJ5 1347 aa14.59□□□□□ -0.07
USP3-202ENST00000380324 NEK4P51957 841 aa14.58□□□□□ -0.08
USP3-202ENST00000380324 FOXO4P98177 505 aa14.58□□□□□ -0.08
USP3-202ENST00000380324 VSIG10Q8N0Z9 540 aa14.58□□□□□ -0.08
USP3-202ENST00000380324 CCDC191Q8NCU4 936 aa14.58□□□□□ -0.08
USP3-202ENST00000380324 SLC4A9Q96Q91 983 aa14.58□□□□□ -0.08
USP3-202ENST00000380324 PRIM1P49642 420 aaKnown RBP14.58□□□□□ -0.08
USP3-202ENST00000380324 TEX13AQ9BXU3 409 aaPredicted RBP14.58□□□□□ -0.08
USP3-202ENST00000380324 BOLA2Q9H3K6 86 aa14.58□□□□□ -0.08
USP3-202ENST00000380324 DDB1Q16531 1140 aa14.57□□□□□ -0.08
USP3-202ENST00000380324 RAD50Q92878 1312 aa14.57□□□□□ -0.08
USP3-202ENST00000380324 TNNI3KQ59H18 835 aa14.57□□□□□ -0.08
USP3-202ENST00000380324 NOL8Q76FK4 1167 aaKnown RBP14.57□□□□□ -0.08
USP3-202ENST00000380324 EVI5LQ96CN4 794 aa14.57□□□□□ -0.08
USP3-202ENST00000380324 DBNLQ9UJU6 430 aaKnown RBP14.57□□□□□ -0.08
USP3-202ENST00000380324 FPGT-TNNI3KV9GXZ4 949 aa14.57□□□□□ -0.08
USP3-202ENST00000380324 ACSBG1Q96GR2 724 aa14.56□□□□□ -0.08
USP3-202ENST00000380324 UPF3BQ9BZI7 483 aaKnown RBP14.56□□□□□ -0.08
USP3-202ENST00000380324 ZBTB1Q9Y2K1 713 aa14.56□□□□□ -0.08
USP3-202ENST00000380324 NWD2Q9ULI1 1742 aa14.56□□□□□ -0.08
USP3-202ENST00000380324 TOM1O60784 492 aa14.55□□□□□ -0.08
USP3-202ENST00000380324 TCIRG1Q13488 830 aa14.55□□□□□ -0.08
USP3-202ENST00000380324 KIAA1211Q6ZU35 1233 aa14.55□□□□□ -0.08
USP3-202ENST00000380324 CIZ1Q9ULV3 898 aaPredicted RBP14.55□□□□□ -0.08
USP3-202ENST00000380324 ANAPC15P60006 121 aa14.55□□□□□ -0.08
USP3-202ENST00000380324 FSD1Q9BTV5 496 aa14.55□□□□□ -0.08
USP3-202ENST00000380324 ISCA1Q9BUE6 129 aa14.55□□□□□ -0.08
USP3-202ENST00000380324 ANKRD36CQ5JPF3 1778 aa14.55□□□□□ -0.08
USP3-202ENST00000380324 CYP19A1P11511 503 aaPredicted RBP14.54□□□□□ -0.08
USP3-202ENST00000380324 GPTP24298 496 aa14.54□□□□□ -0.08
USP3-202ENST00000380324 MCM4P33991 863 aa14.54□□□□□ -0.08
USP3-202ENST00000380324 HSPA4P34932 840 aa14.54□□□□□ -0.08
USP3-202ENST00000380324 GSE1Q14687 1217 aa14.54□□□□□ -0.08
USP3-202ENST00000380324 TNPO1Q92973 898 aaKnown RBP14.54□□□□□ -0.08
USP3-202ENST00000380324 EDC3Q96F86 508 aaKnown RBP14.54□□□□□ -0.08
USP3-202ENST00000380324 ZNF594Q96JF6 807 aaPredicted RBP14.54□□□□□ -0.08
USP3-202ENST00000380324 CCDC85AQ96PX6 553 aaPredicted RBP14.54□□□□□ -0.08
USP3-202ENST00000380324 LSG1Q9H089 658 aaKnown RBP14.54□□□□□ -0.08
USP3-202ENST00000380324 NDUFB9Q9Y6M9 179 aa14.54□□□□□ -0.08
USP3-202ENST00000380324 MAP3K15Q6ZN16 1313 aa14.54□□□□□ -0.08
USP3-202ENST00000380324 RUFY2Q8WXA3 655 aa14.54□□□□□ -0.08
USP3-202ENST00000380324 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
USP3-202ENST00000380324 FAM227BQ96M60 508 aa14.54□□□□□ -0.08
USP3-202ENST00000380324 CDCA7Q9BWT1 371 aaPredicted RBP14.54□□□□□ -0.08
USP3-202ENST00000380324 RAB3GAP1Q15042 981 aa14.53□□□□□ -0.08
USP3-202ENST00000380324 HLFQ16534 295 aa14.53□□□□□ -0.08
USP3-202ENST00000380324 DBNDD2Q9BQY9 259 aa14.53□□□□□ -0.08
USP3-202ENST00000380324 NUP98P52948 1817 aa14.53□□□□□ -0.08
USP3-202ENST00000380324 SPATA31A5Q5VU36 1347 aa14.53□□□□□ -0.08
USP3-202ENST00000380324 SPATA31A7Q8IWB4 1347 aa14.53□□□□□ -0.08
USP3-202ENST00000380324 ZGPATQ8N5A5 531 aaKnown RBP14.53□□□□□ -0.08
USP3-202ENST00000380324 THRAP3Q9Y2W1 955 aaKnown RBP14.53□□□□□ -0.08
USP3-202ENST00000380324 NMIQ13287 307 aaPredicted RBP14.52□□□□□ -0.08
USP3-202ENST00000380324 ATG9AQ7Z3C6 839 aa14.52□□□□□ -0.08
USP3-202ENST00000380324 MARCH10Q8NA82 808 aaPredicted RBP14.52□□□□□ -0.08
USP3-202ENST00000380324 SLIT2O94813 1529 aa14.52□□□□□ -0.08
USP3-202ENST00000380324 SSFA2P28290 1259 aa14.52□□□□□ -0.09
USP3-202ENST00000380324 PTH1RQ03431 593 aa14.52□□□□□ -0.09
USP3-202ENST00000380324 LRRC24Q50LG9 513 aa14.52□□□□□ -0.09
USP3-202ENST00000380324 DNAJC2Q99543 621 aaKnown RBP14.52□□□□□ -0.09
USP3-202ENST00000380324 MYH3P11055 1940 aa14.51□□□□□ -0.09
USP3-202ENST00000380324 A0A0D9SFI3 127 aa14.51□□□□□ -0.09
USP3-202ENST00000380324 UBAP1LF5GYI3 381 aa14.51□□□□□ -0.09
USP3-202ENST00000380324 EPB41L2O43491 1005 aaKnown RBP14.51□□□□□ -0.09
USP3-202ENST00000380324 GIGYF2Q6Y7W6 1299 aaKnown RBP14.51□□□□□ -0.09
USP3-202ENST00000380324 SYNE4Q8N205 404 aa14.51□□□□□ -0.09
USP3-202ENST00000380324 NEUROD6Q96NK8 337 aa14.51□□□□□ -0.09
USP3-202ENST00000380324 TBC1D2BQ9UPU7 963 aa14.51□□□□□ -0.09
USP3-202ENST00000380324 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
USP3-202ENST00000380324 TMX3Q96JJ7 454 aa14.5□□□□□ -0.09
USP3-202ENST00000380324 SNX14Q9Y5W7 946 aa14.5□□□□□ -0.09
USP3-202ENST00000380324 CCDC57Q2TAC2 916 aa14.5□□□□□ -0.09
USP3-202ENST00000380324 C8orf37Q96NL8 207 aa14.5□□□□□ -0.09
USP3-202ENST00000380324 PUS3Q9BZE2 481 aaKnown RBP14.5□□□□□ -0.09
USP3-202ENST00000380324 CCDC171Q6TFL3 1326 aa14.5□□□□□ -0.09
USP3-202ENST00000380324 ZNF609O15014 1411 aa14.49□□□□□ -0.09
USP3-202ENST00000380324 EYA2O00167 538 aa14.49□□□□□ -0.09
USP3-202ENST00000380324 HIP1O00291 1037 aa14.49□□□□□ -0.09
USP3-202ENST00000380324 PCCAP05165 728 aaPredicted RBP14.49□□□□□ -0.09
USP3-202ENST00000380324 ATP5JP18859 108 aa14.49□□□□□ -0.09
USP3-202ENST00000380324 IL15P40933 162 aaPredicted RBP14.49□□□□□ -0.09
USP3-202ENST00000380324 PKP1Q13835 747 aa14.49□□□□□ -0.09
USP3-202ENST00000380324 DZIP3Q86Y13 1208 aaKnown RBP14.49□□□□□ -0.09
USP3-202ENST00000380324 ZBTB38Q8NAP3 1195 aaPredicted RBP14.49□□□□□ -0.09
USP3-202ENST00000380324 TIMM10P62072 90 aa14.49□□□□□ -0.09
USP3-202ENST00000380324 TRIM28Q13263 835 aaKnown RBP14.49□□□□□ -0.09
USP3-202ENST00000380324 FAM98CQ17RN3 349 aaKnown RBP14.49□□□□□ -0.09
USP3-202ENST00000380324 NLRP10Q86W26 655 aa14.49□□□□□ -0.09
USP3-202ENST00000380324 GBP4Q96PP9 640 aa14.49□□□□□ -0.09
USP3-202ENST00000380324 DDX11L8A8MPP1 907 aa14.48□□□□□ -0.09
USP3-202ENST00000380324 ATP6V1AP38606 617 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms