RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 CCDC172P0C7W6 258 aa11.98□□□□□ -0.49
CCDC85C-201ENST00000380243 GOLGA8BA8MQT2 603 aa11.98□□□□□ -0.49
CCDC85C-201ENST00000380243 CCDC38Q502W7 563 aa11.98□□□□□ -0.49
CCDC85C-201ENST00000380243 DDX12PQ92771 950 aa11.98□□□□□ -0.49
CCDC85C-201ENST00000380243 NAP1L3Q99457 506 aaPredicted RBP11.98□□□□□ -0.49
CCDC85C-201ENST00000380243 A0A1W2PRG0 241 aa11.98□□□□□ -0.49
CCDC85C-201ENST00000380243 IFI16Q16666 785 aaKnown RBP11.98□□□□□ -0.49
CCDC85C-201ENST00000380243 KCNG4Q8TDN1 519 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 EID1Q9Y6B2 187 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 HDGFL1Q5TGJ6 251 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 HMG20BQ9P0W2 317 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 LARP1Q6PKG0 1096 aaKnown RBP11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 DDX46Q7L014 1031 aaKnown RBP11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 PYM1Q9BRP8 204 aaKnown RBP11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 CCDC77Q9BR77 488 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 ZNF569Q5MCW4 686 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 ANKRD18BA2A2Z9 1011 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 F13A1P00488 732 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 IFNKQ9P0W0 207 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 NCOA1Q15788 1441 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 AOPEPQ8N6M6 819 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 SELENOOQ9BVL4 669 aa11.97□□□□□ -0.49
CCDC85C-201ENST00000380243 TRIM21P19474 475 aaKnown RBP11.96□□□□□ -0.49
CCDC85C-201ENST00000380243 SLC8A1P32418 973 aa11.96□□□□□ -0.49
CCDC85C-201ENST00000380243 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
CCDC85C-201ENST00000380243 SDSP20132 328 aa11.96□□□□□ -0.49
CCDC85C-201ENST00000380243 CIB2O75838 187 aa11.96□□□□□ -0.49
CCDC85C-201ENST00000380243 MAP3K9P80192 1104 aa11.96□□□□□ -0.49
CCDC85C-201ENST00000380243 ANKRD50Q9ULJ7 1429 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 CYLC1P35663 651 aaPredicted RBP11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 SPAG1Q07617 926 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 PPFIA1Q13136 1202 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 MRPS27Q92552 414 aaKnown RBP11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 SERPINA10Q9UK55 444 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 GOLGA6BA6NDN3 693 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 SEC24BO95487 1268 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 ALDH3A1P30838 453 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 DNM1Q05193 864 aaKnown RBP11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 GUCY1B3Q02153 619 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 FKBP4Q02790 459 aaKnown RBP eCLIP11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 BRD3Q15059 726 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 GBP5Q96PP8 586 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 NACADO15069 1562 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 IFT81Q8WYA0 676 aa11.96□□□□□ -0.5
CCDC85C-201ENST00000380243 KRT83P78385 493 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 PNMA8AQ86V59 439 aaPredicted RBP11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 LUC7L2Q9Y383 392 aaKnown RBP11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 PPFIBP2Q8ND30 876 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 RPGRIP1LQ68CZ1 1315 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 VCXQ9H320 206 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 ABCC11Q96J66 1382 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 ZSCAN25Q6NSZ9 544 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 CNKSR2Q8WXI2 1034 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 LZTFL1Q9NQ48 299 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 TRIM4Q9C037 500 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 FEZ2Q9UHY8 353 aaPredicted RBP11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 NFE2L2Q16236 605 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 VEZTQ9HBM0 779 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 KIAA0753Q2KHM9 967 aa11.95□□□□□ -0.5
CCDC85C-201ENST00000380243 NEK11Q8NG66 645 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 TRIM7Q9C029 511 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 JRKLQ9Y4A0 524 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 CUX1P39880 1505 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 CAPN7Q9Y6W3 813 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 SOGA3Q5TF21 947 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 USP16Q9Y5T5 823 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 KARSQ15046 597 aaKnown RBP11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 TSGA10Q9BZW7 698 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 IKBKGQ9Y6K9 419 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 CACNA2D3Q8IZS8 1091 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 SLC12A5Q9H2X9 1139 aa11.94□□□□□ -0.5
CCDC85C-201ENST00000380243 MYO1BO43795 1136 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 SH3BGRP55822 239 aaPredicted RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 CCT2P78371 535 aaKnown RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 STMN2Q93045 179 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 ZNF365Q70YC5 407 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 CEP128Q6ZU80 1094 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 BAG1Q99933 345 aaPredicted RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 SELENOSQ9BQE4 189 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 PRPF4BQ13523 1007 aaKnown RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 CFAP58Q5T655 872 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 WDHD1O75717 1129 aaPredicted RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 PSME1Q06323 249 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 FAM160A1Q05DH4 1040 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 LUC7L3O95232 432 aaKnown RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 SSRP1Q08945 709 aaKnown RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 ZNF644Q9H582 1327 aaPredicted RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 NOL3O60936 208 aaKnown RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 LMOD1P29536 600 aaPredicted RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 HOMER2Q9NSB8 354 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 RMND1Q9NWS8 449 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 ELP1O95163 1332 aa11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 ORC3Q9UBD5 711 aaPredicted RBP11.93□□□□□ -0.5
CCDC85C-201ENST00000380243 ERICH3Q5RHP9 1530 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 ZGPATQ8N5A5 531 aaKnown RBP11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 RAD50Q92878 1312 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms