RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 C5P01031 1676 aa26.23■■□□□ 1.79
TRIM54-202ENST00000380075 SOCS7O14512 581 aa26.22■■□□□ 1.79
TRIM54-202ENST00000380075 KCNQ4P56696 695 aa26.22■■□□□ 1.79
TRIM54-202ENST00000380075 NUTM1Q86Y26 1132 aa26.22■■□□□ 1.79
TRIM54-202ENST00000380075 TTC5Q8N0Z6 440 aa26.22■■□□□ 1.79
TRIM54-202ENST00000380075 PI4K2BQ8TCG2 481 aa26.22■■□□□ 1.79
TRIM54-202ENST00000380075 CWC22Q9HCG8 908 aaKnown RBP26.22■■□□□ 1.79
TRIM54-202ENST00000380075 SNRPA1P09661 255 aaKnown RBP26.22■■□□□ 1.79
TRIM54-202ENST00000380075 MCM2P49736 904 aa26.22■■□□□ 1.79
TRIM54-202ENST00000380075 NEXNQ0ZGT2 675 aa26.21■■□□□ 1.79
TRIM54-202ENST00000380075 OS9Q13438 667 aaPredicted RBP26.2■■□□□ 1.79
TRIM54-202ENST00000380075 TXNRD1Q16881 649 aa26.2■■□□□ 1.79
TRIM54-202ENST00000380075 CLEC17AQ6ZS10 378 aa26.2■■□□□ 1.79
TRIM54-202ENST00000380075 CNTROBQ8N137 903 aa26.2■■□□□ 1.79
TRIM54-202ENST00000380075 FMNL2Q96PY5 1086 aa26.2■■□□□ 1.79
TRIM54-202ENST00000380075 LOC102724428A0A0B4J2F2 783 aa26.2■■□□□ 1.78
TRIM54-202ENST00000380075 SIK1P57059 783 aa26.2■■□□□ 1.78
TRIM54-202ENST00000380075 CWF19L2Q2TBE0 894 aaKnown RBP26.2■■□□□ 1.78
TRIM54-202ENST00000380075 RIC3Q7Z5B4 369 aa26.2■■□□□ 1.78
TRIM54-202ENST00000380075 CLASRPQ8N2M8 674 aaKnown RBP26.2■■□□□ 1.78
TRIM54-202ENST00000380075 SLC4A9Q96Q91 983 aa26.2■■□□□ 1.78
TRIM54-202ENST00000380075 TRAK2O60296 914 aa26.19■■□□□ 1.78
TRIM54-202ENST00000380075 NUCB2P80303 420 aa26.19■■□□□ 1.78
TRIM54-202ENST00000380075 ZNF496Q96IT1 587 aaPredicted RBP26.19■■□□□ 1.78
TRIM54-202ENST00000380075 GLRX3O76003 335 aaKnown RBP26.18■■□□□ 1.78
TRIM54-202ENST00000380075 LRRC4BQ9NT99 713 aa26.18■■□□□ 1.78
TRIM54-202ENST00000380075 GPATCH3Q96I76 525 aa26.18■■□□□ 1.78
TRIM54-202ENST00000380075 ANO2Q9NQ90 1003 aa26.18■■□□□ 1.78
TRIM54-202ENST00000380075 CCNL1Q9UK58 526 aaPredicted RBP26.18■■□□□ 1.78
TRIM54-202ENST00000380075 L1TD1Q5T7N2 865 aaKnown RBP26.17■■□□□ 1.78
TRIM54-202ENST00000380075 PAPPAQ13219 1627 aa26.17■■□□□ 1.78
TRIM54-202ENST00000380075 AIMP1Q12904 312 aaKnown RBP26.16■■□□□ 1.78
TRIM54-202ENST00000380075 METTL22Q9BUU2 404 aaPredicted RBP26.16■■□□□ 1.78
TRIM54-202ENST00000380075 ATP6V1AP38606 617 aa26.16■■□□□ 1.78
TRIM54-202ENST00000380075 SKOR2Q2VWA4 1001 aaPredicted RBP26.16■■□□□ 1.78
TRIM54-202ENST00000380075 FOXD4L1Q9NU39 408 aa26.16■■□□□ 1.78
TRIM54-202ENST00000380075 KCPQ6ZWJ8 1503 aa26.16■■□□□ 1.78
TRIM54-202ENST00000380075 SUCLG2Q96I99 432 aa26.15■■□□□ 1.78
TRIM54-202ENST00000380075 IGKV5-2P06315 115 aa26.15■■□□□ 1.78
TRIM54-202ENST00000380075 SLC27A3Q5K4L6 730 aa26.15■■□□□ 1.78
TRIM54-202ENST00000380075 XAGE3Q8WTP9 111 aa26.15■■□□□ 1.78
TRIM54-202ENST00000380075 ERBB4Q15303 1308 aa26.14■■□□□ 1.78
TRIM54-202ENST00000380075 NEURL1BA8MQ27 555 aa26.14■■□□□ 1.77
TRIM54-202ENST00000380075 ITPK1Q13572 414 aa26.14■■□□□ 1.77
TRIM54-202ENST00000380075 COPS6Q7L5N1 327 aa26.13■■□□□ 1.77
TRIM54-202ENST00000380075 LRP10Q7Z4F1 713 aa26.13■■□□□ 1.77
TRIM54-202ENST00000380075 AK9Q5TCS8 1911 aa26.13■■□□□ 1.77
TRIM54-202ENST00000380075 GOLGA6L22H0YM25 854 aa26.13■■□□□ 1.77
TRIM54-202ENST00000380075 ECHDC1Q9NTX5 307 aa26.13■■□□□ 1.77
TRIM54-202ENST00000380075 LAMB4A4D0S4 1761 aa26.13■■□□□ 1.77
TRIM54-202ENST00000380075 LY75O60449 1722 aa26.12■■□□□ 1.77
TRIM54-202ENST00000380075 COL15A1P39059 1388 aa26.12■■□□□ 1.77
TRIM54-202ENST00000380075 MYL6BP14649 208 aa26.12■■□□□ 1.77
TRIM54-202ENST00000380075 GCKRQ14397 625 aa26.12■■□□□ 1.77
TRIM54-202ENST00000380075 ANKRD13DQ6ZTN6 518 aa26.12■■□□□ 1.77
TRIM54-202ENST00000380075 KAZALD1Q96I82 304 aa26.12■■□□□ 1.77
TRIM54-202ENST00000380075 BICC1Q9H694 974 aaKnown RBP26.12■■□□□ 1.77
TRIM54-202ENST00000380075 SGSM2O43147 1006 aa26.11■■□□□ 1.77
TRIM54-202ENST00000380075 IFIT2P09913 472 aaKnown RBP26.11■■□□□ 1.77
TRIM54-202ENST00000380075 NEK4P51957 841 aa26.11■■□□□ 1.77
TRIM54-202ENST00000380075 G3BP1Q13283 466 aaKnown RBP eCLIP26.11■■□□□ 1.77
TRIM54-202ENST00000380075 RGPD3A6NKT7 1758 aaPredicted RBP26.1■■□□□ 1.77
TRIM54-202ENST00000380075 RGPD4Q7Z3J3 1758 aa26.1■■□□□ 1.77
TRIM54-202ENST00000380075 DNAJC10Q8IXB1 793 aa26.1■■□□□ 1.77
TRIM54-202ENST00000380075 VSIG10Q8N0Z9 540 aa26.1■■□□□ 1.77
TRIM54-202ENST00000380075 USP16Q9Y5T5 823 aa26.1■■□□□ 1.77
TRIM54-202ENST00000380075 UBR2Q8IWV8 1755 aa26.1■■□□□ 1.77
TRIM54-202ENST00000380075 CYP2E1P05181 493 aaPredicted RBP26.09■■□□□ 1.77
TRIM54-202ENST00000380075 SSFA2P28290 1259 aa26.09■■□□□ 1.77
TRIM54-202ENST00000380075 HSPA4P34932 840 aa26.09■■□□□ 1.77
TRIM54-202ENST00000380075 RUFY2Q8WXA3 655 aa26.09■■□□□ 1.77
TRIM54-202ENST00000380075 RAD50Q92878 1312 aa26.09■■□□□ 1.77
TRIM54-202ENST00000380075 LINC00116Q8NCU8 138 aa26.09■■□□□ 1.77
TRIM54-202ENST00000380075 MYD88Q99836 296 aa26.09■■□□□ 1.77
TRIM54-202ENST00000380075 ISY1Q9ULR0 285 aaKnown RBP26.09■■□□□ 1.77
TRIM54-202ENST00000380075 PA2G4Q9UQ80 394 aaKnown RBP26.08■■□□□ 1.77
TRIM54-202ENST00000380075 PALD1Q9ULE6 856 aa26.07■■□□□ 1.76
TRIM54-202ENST00000380075 AACSQ86V21 672 aa26.06■■□□□ 1.76
TRIM54-202ENST00000380075 EVI5LQ96CN4 794 aa26.06■■□□□ 1.76
TRIM54-202ENST00000380075 FSD2A1L4K1 749 aa26.05■■□□□ 1.76
TRIM54-202ENST00000380075 GOLGA6L3A6NEY3 463 aa26.05■■□□□ 1.76
TRIM54-202ENST00000380075 MAP4K4O95819 1239 aaPredicted RBP26.05■■□□□ 1.76
TRIM54-202ENST00000380075 CUL4AQ13619 759 aa26.05■■□□□ 1.76
TRIM54-202ENST00000380075 KIAA1211Q6ZU35 1233 aa26.05■■□□□ 1.76
TRIM54-202ENST00000380075 PLBD2Q8NHP8 589 aa26.05■■□□□ 1.76
TRIM54-202ENST00000380075 INTS4Q96HW7 963 aaKnown RBP26.05■■□□□ 1.76
TRIM54-202ENST00000380075 TMX3Q96JJ7 454 aa26.05■■□□□ 1.76
TRIM54-202ENST00000380075 BAG4O95429 457 aaKnown RBP26.04■■□□□ 1.76
TRIM54-202ENST00000380075 SASH1O94885 1247 aa26.04■■□□□ 1.76
TRIM54-202ENST00000380075 DIAPH3Q9NSV4 1193 aa26.04■■□□□ 1.76
TRIM54-202ENST00000380075 RREB1Q92766 1687 aa26.03■■□□□ 1.76
TRIM54-202ENST00000380075 HIP1O00291 1037 aa26.03■■□□□ 1.76
TRIM54-202ENST00000380075 CYP19A1P11511 503 aaPredicted RBP26.03■■□□□ 1.76
TRIM54-202ENST00000380075 LSG1Q9H089 658 aaKnown RBP26.03■■□□□ 1.76
TRIM54-202ENST00000380075 IL25Q9H293 177 aa26.03■■□□□ 1.76
TRIM54-202ENST00000380075 ANO8Q9HCE9 1232 aaPredicted RBP26.03■■□□□ 1.76
TRIM54-202ENST00000380075 ARFGEF2Q9Y6D5 1785 aa26.02■■□□□ 1.76
TRIM54-202ENST00000380075 TEX13AQ9BXU3 409 aaPredicted RBP26.02■■□□□ 1.76
TRIM54-202ENST00000380075 ZNF827Q17R98 1081 aa26.02■■□□□ 1.76
TRIM54-202ENST00000380075 COPRSQ9NQ92 184 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms