RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 STK38Q15208 465 aa12.68□□□□□ -0.38
USP6NL-202ENST00000379237 NR1I2O75469 434 aa12.67□□□□□ -0.38
USP6NL-202ENST00000379237 INPP5BP32019 993 aa12.67□□□□□ -0.38
USP6NL-202ENST00000379237 EIF5P55010 431 aaKnown RBP12.67□□□□□ -0.38
USP6NL-202ENST00000379237 SIL1Q9H173 461 aa12.67□□□□□ -0.38
USP6NL-202ENST00000379237 ZNF446Q9NWS9 450 aa12.67□□□□□ -0.38
USP6NL-202ENST00000379237 FAN1Q9Y2M0 1017 aa12.67□□□□□ -0.38
USP6NL-202ENST00000379237 KARSQ15046 597 aaKnown RBP12.67□□□□□ -0.38
USP6NL-202ENST00000379237 LONRF2Q1L5Z9 754 aa12.67□□□□□ -0.38
USP6NL-202ENST00000379237 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
USP6NL-202ENST00000379237 ZNF396Q96N95 335 aaPredicted RBP12.67□□□□□ -0.38
USP6NL-202ENST00000379237 TROQ12816 1431 aaPredicted RBP12.67□□□□□ -0.38
USP6NL-202ENST00000379237 JPH2Q9BR39 696 aaPredicted RBP12.67□□□□□ -0.38
USP6NL-202ENST00000379237 MTMR6Q9Y217 621 aa12.67□□□□□ -0.38
USP6NL-202ENST00000379237 WDR7Q9Y4E6 1490 aa12.67□□□□□ -0.38
USP6NL-202ENST00000379237 SSR1P43307 286 aaKnown RBP12.67□□□□□ -0.38
USP6NL-202ENST00000379237 JPH4Q96JJ6 628 aa12.67□□□□□ -0.38
USP6NL-202ENST00000379237 KIF5CO60282 957 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 DCTN1Q14203 1278 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 PLA2G4DQ86XP0 818 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 A0A087WUV0 522 aaPredicted RBP12.66□□□□□ -0.38
USP6NL-202ENST00000379237 CCDC196A0A1B0GTZ2 297 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 EFCAB2Q5VUJ9 269 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 OTUD6BQ8N6M0 293 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 AFAP1L1Q8TED9 768 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 MBIPQ9NS73 344 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 CTTNBP2Q8WZ74 1663 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 A0A087WWV3 80 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 F6X3S4 739 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 KIF1CO43896 1103 aaKnown RBP12.66□□□□□ -0.38
USP6NL-202ENST00000379237 GNAI3P08754 354 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 CC2D1AQ6P1N0 951 aaPredicted RBP12.66□□□□□ -0.38
USP6NL-202ENST00000379237 TADA2BQ86TJ2 420 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 PACS2Q86VP3 889 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 CNNM3Q8NE01 707 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
USP6NL-202ENST00000379237 PTPRCP08575 1304 aa12.66□□□□□ -0.38
USP6NL-202ENST00000379237 WDHD1O75717 1129 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-202ENST00000379237 H2AFXP16104 143 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-202ENST00000379237 SATB1Q01826 763 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 ANKRD1Q15327 319 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 KANK1Q14678 1352 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 A2MP01023 1474 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 CLASP1Q7Z460 1538 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 GOLGA6L9A6NEM1 432 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 FCHSD2O94868 740 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 GBP2P32456 591 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-202ENST00000379237 UBASH3AP57075 661 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 CDC37L1Q7L3B6 337 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 RBM28Q9NW13 759 aaKnown RBP12.65□□□□□ -0.38
USP6NL-202ENST00000379237 IFIT2P09913 472 aaKnown RBP12.65□□□□□ -0.38
USP6NL-202ENST00000379237 NAA25Q14CX7 972 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 SYNE3Q6ZMZ3 975 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 PARD6BQ9BYG5 372 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 RGS12O14924 1447 aa12.65□□□□□ -0.38
USP6NL-202ENST00000379237 CHMP4BP1P59074 171 aa12.65□□□□□ -0.39
USP6NL-202ENST00000379237 BIRC2Q13490 618 aa12.65□□□□□ -0.39
USP6NL-202ENST00000379237 LEO1Q8WVC0 666 aaPredicted RBP12.65□□□□□ -0.39
USP6NL-202ENST00000379237 BICC1Q9H694 974 aaKnown RBP12.65□□□□□ -0.39
USP6NL-202ENST00000379237 SLC24A3Q9HC58 644 aa12.65□□□□□ -0.39
USP6NL-202ENST00000379237 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-202ENST00000379237 HSP90AA4PQ58FG1 418 aa12.64□□□□□ -0.39
USP6NL-202ENST00000379237 PES1O00541 588 aaKnown RBP12.64□□□□□ -0.39
USP6NL-202ENST00000379237 C8orf58Q8NAV2 365 aa12.64□□□□□ -0.39
USP6NL-202ENST00000379237 PLCD4Q9BRC7 762 aa12.64□□□□□ -0.39
USP6NL-202ENST00000379237 XPO4Q9C0E2 1151 aaKnown RBP12.64□□□□□ -0.39
USP6NL-202ENST00000379237 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-202ENST00000379237 CDC25BP30305 580 aa12.64□□□□□ -0.39
USP6NL-202ENST00000379237 MAP9Q49MG5 647 aa12.64□□□□□ -0.39
USP6NL-202ENST00000379237 SLC52A1Q9NWF4 448 aa12.63□□□□□ -0.39
USP6NL-202ENST00000379237 PSDA5PKW4 1024 aaPredicted RBP12.63□□□□□ -0.39
USP6NL-202ENST00000379237 GUCY1B3Q02153 619 aa12.63□□□□□ -0.39
USP6NL-202ENST00000379237 IMPACTQ9P2X3 320 aa12.63□□□□□ -0.39
USP6NL-202ENST00000379237 SNX14Q9Y5W7 946 aa12.63□□□□□ -0.39
USP6NL-202ENST00000379237 CAPN7Q9Y6W3 813 aa12.63□□□□□ -0.39
USP6NL-202ENST00000379237 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
USP6NL-202ENST00000379237 CLNS1AP54105 237 aaKnown RBP12.63□□□□□ -0.39
USP6NL-202ENST00000379237 C11orf57Q6ZUT1 292 aaPredicted RBP12.63□□□□□ -0.39
USP6NL-202ENST00000379237 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
USP6NL-202ENST00000379237 MPHOSPH10O00566 681 aaKnown RBP12.63□□□□□ -0.39
USP6NL-202ENST00000379237 CCT5P48643 541 aa12.63□□□□□ -0.39
USP6NL-202ENST00000379237 NYAP1Q6ZVC0 841 aa12.63□□□□□ -0.39
USP6NL-202ENST00000379237 MPHOSPH8Q99549 860 aa12.63□□□□□ -0.39
USP6NL-202ENST00000379237 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
USP6NL-202ENST00000379237 BRD3Q15059 726 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 POTEDQ86YR6 584 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 FAM204AQ9H8W3 233 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 DONSONQ9NYP3 566 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 A0A1B0GUA9 196 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 FRMD3A2A2Y4 597 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 KIF3BO15066 747 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 SLC3A2P08195 630 aaKnown RBP12.62□□□□□ -0.39
USP6NL-202ENST00000379237 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 PPFIBP1Q86W92 1011 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 VEZTQ9HBM0 779 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 CTAGE15A4D2H0 777 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 SSBP05455 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
USP6NL-202ENST00000379237 CTAGE8P0CG41 777 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 CTAGE6Q86UF2 777 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 239.8 ms