RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 SYNE4Q8N205 404 aa30.58■■■□□ 2.49
SDHAF1-201ENST00000378887 PDZRN3Q9UPQ7 1066 aa30.58■■■□□ 2.49
SDHAF1-201ENST00000378887 TRIM28Q13263 835 aaKnown RBP30.57■■■□□ 2.48
SDHAF1-201ENST00000378887 SLC10A5Q5PT55 438 aa30.57■■■□□ 2.48
SDHAF1-201ENST00000378887 C7orf43Q8WVR3 580 aa30.57■■■□□ 2.48
SDHAF1-201ENST00000378887 COL4A1P02462 1669 aa30.56■■■□□ 2.48
SDHAF1-201ENST00000378887 GOLGA2Q08379 1002 aa30.56■■■□□ 2.48
SDHAF1-201ENST00000378887 SLFN5Q08AF3 891 aa30.56■■■□□ 2.48
SDHAF1-201ENST00000378887 STYK1Q6J9G0 422 aa30.56■■■□□ 2.48
SDHAF1-201ENST00000378887 TTLL6Q8N841 843 aa30.56■■■□□ 2.48
SDHAF1-201ENST00000378887 CDCA7LQ96GN5 454 aa30.56■■■□□ 2.48
SDHAF1-201ENST00000378887 NYXQ9GZU5 481 aa30.56■■■□□ 2.48
SDHAF1-201ENST00000378887 HSP90AB3PQ58FF7 597 aa30.55■■■□□ 2.48
SDHAF1-201ENST00000378887 MYH16Q9H6N6 1097 aa30.54■■■□□ 2.48
SDHAF1-201ENST00000378887 RNF123Q5XPI4 1314 aa30.53■■■□□ 2.48
SDHAF1-201ENST00000378887 SLC51AQ86UW1 340 aa30.52■■■□□ 2.48
SDHAF1-201ENST00000378887 MASTLQ96GX5 879 aa30.52■■■□□ 2.48
SDHAF1-201ENST00000378887 ATP5J2-PTCD1G3V325 749 aa30.51■■■□□ 2.47
SDHAF1-201ENST00000378887 NFKBIEO00221 500 aa30.51■■■□□ 2.47
SDHAF1-201ENST00000378887 UTP14AQ9BVJ6 771 aaKnown RBP30.51■■■□□ 2.47
SDHAF1-201ENST00000378887 HOXA10P31260 410 aaPredicted RBP30.5■■■□□ 2.47
SDHAF1-201ENST00000378887 PRPF40BQ6NWY9 871 aaKnown RBP30.5■■■□□ 2.47
SDHAF1-201ENST00000378887 SLC4A2P04920 1241 aa30.49■■■□□ 2.47
SDHAF1-201ENST00000378887 IGKV5-2P06315 115 aa30.49■■■□□ 2.47
SDHAF1-201ENST00000378887 NPR1P16066 1061 aa30.49■■■□□ 2.47
SDHAF1-201ENST00000378887 PPP1R42Q7Z4L9 355 aa30.49■■■□□ 2.47
SDHAF1-201ENST00000378887 ZNF784Q8NCA9 323 aaPredicted RBP30.49■■■□□ 2.47
SDHAF1-201ENST00000378887 ZNF428Q96B54 188 aa30.49■■■□□ 2.47
SDHAF1-201ENST00000378887 METTL22Q9BUU2 404 aaPredicted RBP30.49■■■□□ 2.47
SDHAF1-201ENST00000378887 E9PSI1 815 aa30.48■■■□□ 2.47
SDHAF1-201ENST00000378887 ZNF622Q969S3 477 aaKnown RBP eCLIP30.48■■■□□ 2.47
SDHAF1-201ENST00000378887 TAF1P21675 1872 aa30.47■■■□□ 2.47
SDHAF1-201ENST00000378887 KSR2Q6VAB6 950 aa30.47■■■□□ 2.47
SDHAF1-201ENST00000378887 CHMP4AQ9BY43 222 aa30.47■■■□□ 2.47
SDHAF1-201ENST00000378887 PI4KAP2A4QPH2 592 aa30.46■■■□□ 2.47
SDHAF1-201ENST00000378887 FLIIQ13045 1269 aa30.46■■■□□ 2.47
SDHAF1-201ENST00000378887 PI4KAP1Q8N8J0 262 aa30.46■■■□□ 2.47
SDHAF1-201ENST00000378887 MAP3K2Q9Y2U5 619 aa30.46■■■□□ 2.47
SDHAF1-201ENST00000378887 CCDC88AQ3V6T2 1871 aa30.46■■■□□ 2.47
SDHAF1-201ENST00000378887 RASSF7Q02833 373 aa30.45■■■□□ 2.47
SDHAF1-201ENST00000378887 ARHGAP27Q6ZUM4 889 aa30.45■■■□□ 2.47
SDHAF1-201ENST00000378887 CNKSR1Q969H4 720 aa30.45■■■□□ 2.47
SDHAF1-201ENST00000378887 OLFM4Q6UX06 510 aa30.44■■■□□ 2.46
SDHAF1-201ENST00000378887 RIC3Q7Z5B4 369 aa30.44■■■□□ 2.46
SDHAF1-201ENST00000378887 MYD88Q99836 296 aa30.44■■■□□ 2.46
SDHAF1-201ENST00000378887 STK31Q9BXU1 1019 aa30.44■■■□□ 2.46
SDHAF1-201ENST00000378887 SH3TC1Q8TE82 1336 aa30.44■■■□□ 2.46
SDHAF1-201ENST00000378887 NPHP1O15259 732 aa30.43■■■□□ 2.46
SDHAF1-201ENST00000378887 C21orf2O43822 256 aa30.43■■■□□ 2.46
SDHAF1-201ENST00000378887 HCLS1P14317 486 aaPredicted RBP30.43■■■□□ 2.46
SDHAF1-201ENST00000378887 TRMT112Q9UI30 125 aaKnown RBP30.43■■■□□ 2.46
SDHAF1-201ENST00000378887 DICER1Q9UPY3 1922 aaKnown RBP30.43■■■□□ 2.46
SDHAF1-201ENST00000378887 FAM89AQ96GI7 184 aa30.42■■■□□ 2.46
SDHAF1-201ENST00000378887 LRRC37AA6NMS7 1700 aa30.41■■■□□ 2.46
SDHAF1-201ENST00000378887 TIAM2Q8IVF5 1701 aa30.41■■■□□ 2.46
SDHAF1-201ENST00000378887 GTF2E1P29083 439 aaPredicted RBP30.4■■■□□ 2.46
SDHAF1-201ENST00000378887 CCDC191Q8NCU4 936 aa30.4■■■□□ 2.46
SDHAF1-201ENST00000378887 CRAMP1Q96RY5 1269 aa30.4■■■□□ 2.46
SDHAF1-201ENST00000378887 LTBP3Q9NS15 1303 aa30.4■■■□□ 2.46
SDHAF1-201ENST00000378887 DDX58O95786 925 aaKnown RBP30.38■■■□□ 2.45
SDHAF1-201ENST00000378887 ZBTB38Q8NAP3 1195 aaPredicted RBP30.38■■■□□ 2.45
SDHAF1-201ENST00000378887 NEURL1BA8MQ27 555 aa30.37■■■□□ 2.45
SDHAF1-201ENST00000378887 CWF19L2Q2TBE0 894 aaKnown RBP30.37■■■□□ 2.45
SDHAF1-201ENST00000378887 C9orf131Q5VYM1 1079 aa30.37■■■□□ 2.45
SDHAF1-201ENST00000378887 ABCC4O15439 1325 aa30.37■■■□□ 2.45
SDHAF1-201ENST00000378887 COL4A5P29400 1685 aa30.36■■■□□ 2.45
SDHAF1-201ENST00000378887 PCCAP05165 728 aaPredicted RBP30.36■■■□□ 2.45
SDHAF1-201ENST00000378887 CASP7P55210 303 aa30.36■■■□□ 2.45
SDHAF1-201ENST00000378887 MRPL50Q8N5N7 158 aaKnown RBP30.36■■■□□ 2.45
SDHAF1-201ENST00000378887 NLRP3Q96P20 1036 aa30.36■■■□□ 2.45
SDHAF1-201ENST00000378887 LTBP1Q14766 1721 aa30.36■■■□□ 2.45
SDHAF1-201ENST00000378887 SF3B3Q15393 1217 aaKnown RBP30.35■■■□□ 2.45
SDHAF1-201ENST00000378887 ZNF219Q9P2Y4 722 aaPredicted RBP30.35■■■□□ 2.45
SDHAF1-201ENST00000378887 DUOX1Q9NRD9 1551 aa30.34■■■□□ 2.45
SDHAF1-201ENST00000378887 SSH1Q8WYL5 1049 aa30.34■■■□□ 2.45
SDHAF1-201ENST00000378887 CWC25Q9NXE8 425 aaPredicted RBP30.34■■■□□ 2.45
SDHAF1-201ENST00000378887 F6X3S4 739 aa30.33■■■□□ 2.45
SDHAF1-201ENST00000378887 ALDH1B1P30837 517 aa30.33■■■□□ 2.45
SDHAF1-201ENST00000378887 DNAAF4Q8WXU2 420 aa30.33■■■□□ 2.45
SDHAF1-201ENST00000378887 JARID2Q92833 1246 aaPredicted RBP30.33■■■□□ 2.45
SDHAF1-201ENST00000378887 MYH3P11055 1940 aa30.32■■■□□ 2.44
SDHAF1-201ENST00000378887 CDHR2Q9BYE9 1310 aa30.32■■■□□ 2.44
SDHAF1-201ENST00000378887 IRS4O14654 1257 aaPredicted RBP30.32■■■□□ 2.44
SDHAF1-201ENST00000378887 FKBP5Q13451 457 aaPredicted RBP30.32■■■□□ 2.44
SDHAF1-201ENST00000378887 RTL5Q5HYW3 569 aaPredicted RBP30.32■■■□□ 2.44
SDHAF1-201ENST00000378887 BEND3Q5T5X7 828 aa30.31■■■□□ 2.44
SDHAF1-201ENST00000378887 H7C1W4 665 aa30.3■■■□□ 2.44
SDHAF1-201ENST00000378887 LMNB1P20700 586 aa30.3■■■□□ 2.44
SDHAF1-201ENST00000378887 RPGRQ92834 1020 aaKnown RBP30.3■■■□□ 2.44
SDHAF1-201ENST00000378887 RNF181Q9P0P0 153 aa30.3■■■□□ 2.44
SDHAF1-201ENST00000378887 RBM17Q96I25 401 aaKnown RBP30.29■■■□□ 2.44
SDHAF1-201ENST00000378887 GCKRQ14397 625 aa30.28■■■□□ 2.44
SDHAF1-201ENST00000378887 CCDC93Q567U6 631 aa30.28■■■□□ 2.44
SDHAF1-201ENST00000378887 LINS1Q8NG48 757 aa30.28■■■□□ 2.44
SDHAF1-201ENST00000378887 SOGA3Q5TF21 947 aa30.27■■■□□ 2.44
SDHAF1-201ENST00000378887 TAOK3Q9H2K8 898 aa30.27■■■□□ 2.44
SDHAF1-201ENST00000378887 PPEF1O14829 653 aaPredicted RBP30.26■■■□□ 2.43
SDHAF1-201ENST00000378887 CELF1Q92879 486 aaKnown RBP30.26■■■□□ 2.43
SDHAF1-201ENST00000378887 FKBP4Q02790 459 aaKnown RBP eCLIP30.25■■■□□ 2.43
SDHAF1-201ENST00000378887 GRAPQ13588 217 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms