RNA–Protein interactions for RNA: ENST00000378800.3

CCL19-202, Transcript of C-C motif chemokine ligand 19, humanhuman

TSL 2 BASIC

Gene CCL19, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-202ENST00000378800 CNKSR1Q969H4 720 aa17.07■□□□□ 0.32
CCL19-202ENST00000378800 MYH16Q9H6N6 1097 aa17.07■□□□□ 0.32
CCL19-202ENST00000378800 IBTKQ9P2D0 1353 aaPredicted RBP17.06■□□□□ 0.32
CCL19-202ENST00000378800 PRELPP51888 382 aa17.06■□□□□ 0.32
CCL19-202ENST00000378800 TRIM28Q13263 835 aaKnown RBP17.06■□□□□ 0.32
CCL19-202ENST00000378800 CRY2Q49AN0 593 aa17.06■□□□□ 0.32
CCL19-202ENST00000378800 C9orf131Q5VYM1 1079 aa17.06■□□□□ 0.32
CCL19-202ENST00000378800 PRPF40BQ6NWY9 871 aaKnown RBP17.06■□□□□ 0.32
CCL19-202ENST00000378800 C7orf43Q8WVR3 580 aa17.06■□□□□ 0.32
CCL19-202ENST00000378800 TRMT112Q9UI30 125 aaKnown RBP17.06■□□□□ 0.32
CCL19-202ENST00000378800 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
CCL19-202ENST00000378800 RASSF7Q02833 373 aa17.05■□□□□ 0.32
CCL19-202ENST00000378800 STK31Q9BXU1 1019 aa17.05■□□□□ 0.32
CCL19-202ENST00000378800 NFKBIEO00221 500 aa17.04■□□□□ 0.32
CCL19-202ENST00000378800 HOXA10P31260 410 aaPredicted RBP17.04■□□□□ 0.32
CCL19-202ENST00000378800 PI4KAP2A4QPH2 592 aa17.03■□□□□ 0.32
CCL19-202ENST00000378800 OLFM4Q6UX06 510 aa17.03■□□□□ 0.32
CCL19-202ENST00000378800 PI4KAP1Q8N8J0 262 aa17.03■□□□□ 0.32
CCL19-202ENST00000378800 FAM89AQ96GI7 184 aa17.03■□□□□ 0.32
CCL19-202ENST00000378800 CDCA7LQ96GN5 454 aa17.03■□□□□ 0.32
CCL19-202ENST00000378800 NLRP3Q96P20 1036 aa17.03■□□□□ 0.32
CCL19-202ENST00000378800 MYD88Q99836 296 aa17.03■□□□□ 0.32
CCL19-202ENST00000378800 METTL22Q9BUU2 404 aaPredicted RBP17.03■□□□□ 0.32
CCL19-202ENST00000378800 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
CCL19-202ENST00000378800 ANKRD31Q8N7Z5 1873 aa17.03■□□□□ 0.32
CCL19-202ENST00000378800 ADCY9O60503 1353 aa17.02■□□□□ 0.32
CCL19-202ENST00000378800 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
CCL19-202ENST00000378800 ALDH1B1P30837 517 aa17.02■□□□□ 0.32
CCL19-202ENST00000378800 SLFN5Q08AF3 891 aa17.02■□□□□ 0.32
CCL19-202ENST00000378800 RTL5Q5HYW3 569 aaPredicted RBP17.02■□□□□ 0.32
CCL19-202ENST00000378800 KSR2Q6VAB6 950 aa17.02■□□□□ 0.32
CCL19-202ENST00000378800 RNF123Q5XPI4 1314 aa17.01■□□□□ 0.31
CCL19-202ENST00000378800 SH3TC1Q8TE82 1336 aa17.01■□□□□ 0.31
CCL19-202ENST00000378800 SLC51AQ86UW1 340 aa17.01■□□□□ 0.31
CCL19-202ENST00000378800 ZNF526Q8TF50 670 aaPredicted RBP17.01■□□□□ 0.31
CCL19-202ENST00000378800 RPGRQ92834 1020 aaKnown RBP17.01■□□□□ 0.31
CCL19-202ENST00000378800 RNF181Q9P0P0 153 aa17.01■□□□□ 0.31
CCL19-202ENST00000378800 E9PSI1 815 aa17■□□□□ 0.31
CCL19-202ENST00000378800 IGKV5-2P06315 115 aa17■□□□□ 0.31
CCL19-202ENST00000378800 RIC1Q4ADV7 1423 aa17■□□□□ 0.31
CCL19-202ENST00000378800 JARID2Q92833 1246 aaPredicted RBP17■□□□□ 0.31
CCL19-202ENST00000378800 CRAMP1Q96RY5 1269 aa17■□□□□ 0.31
CCL19-202ENST00000378800 NUP98P52948 1817 aa17■□□□□ 0.31
CCL19-202ENST00000378800 BRCA1P38398 1863 aaKnown RBP16.99■□□□□ 0.31
CCL19-202ENST00000378800 LMNB1P20700 586 aa16.99■□□□□ 0.31
CCL19-202ENST00000378800 FLIIQ13045 1269 aa16.99■□□□□ 0.31
CCL19-202ENST00000378800 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
CCL19-202ENST00000378800 CCDC191Q8NCU4 936 aa16.99■□□□□ 0.31
CCL19-202ENST00000378800 RBM17Q96I25 401 aaKnown RBP16.99■□□□□ 0.31
CCL19-202ENST00000378800 ZBTB38Q8NAP3 1195 aaPredicted RBP16.98■□□□□ 0.31
CCL19-202ENST00000378800 COL11A2P13942 1736 aaPredicted RBP16.97■□□□□ 0.31
CCL19-202ENST00000378800 IRS4O14654 1257 aaPredicted RBP16.97■□□□□ 0.31
CCL19-202ENST00000378800 SOGA3Q5TF21 947 aa16.97■□□□□ 0.31
CCL19-202ENST00000378800 CWC25Q9NXE8 425 aaPredicted RBP16.97■□□□□ 0.31
CCL19-202ENST00000378800 FKBP5Q13451 457 aaPredicted RBP16.96■□□□□ 0.31
CCL19-202ENST00000378800 CWF19L2Q2TBE0 894 aaKnown RBP16.96■□□□□ 0.31
CCL19-202ENST00000378800 CCDC93Q567U6 631 aa16.96■□□□□ 0.31
CCL19-202ENST00000378800 LTBP3Q9NS15 1303 aa16.96■□□□□ 0.3
CCL19-202ENST00000378800 TNRC6CQ9HCJ0 1690 aaKnown RBP16.95■□□□□ 0.3
CCL19-202ENST00000378800 F6X3S4 739 aa16.95■□□□□ 0.3
CCL19-202ENST00000378800 PCCAP05165 728 aaPredicted RBP16.95■□□□□ 0.3
CCL19-202ENST00000378800 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
CCL19-202ENST00000378800 TAOK3Q9H2K8 898 aa16.95■□□□□ 0.3
CCL19-202ENST00000378800 GPBP1L1Q9HC44 474 aaPredicted RBP16.95■□□□□ 0.3
CCL19-202ENST00000378800 SLX4Q8IY92 1834 aa16.95■□□□□ 0.3
CCL19-202ENST00000378800 ABCC4O15439 1325 aa16.95■□□□□ 0.3
CCL19-202ENST00000378800 CHD4Q14839 1912 aa16.94■□□□□ 0.3
CCL19-202ENST00000378800 NEURL1BA8MQ27 555 aa16.94■□□□□ 0.3
CCL19-202ENST00000378800 DDX46Q7L014 1031 aaKnown RBP16.94■□□□□ 0.3
CCL19-202ENST00000378800 RTKN2Q8IZC4 609 aa16.94■□□□□ 0.3
CCL19-202ENST00000378800 DNAAF4Q8WXU2 420 aa16.94■□□□□ 0.3
CCL19-202ENST00000378800 DLEC1Q9Y238 1755 aa16.94■□□□□ 0.3
CCL19-202ENST00000378800 PPEF1O14829 653 aaPredicted RBP16.93■□□□□ 0.3
CCL19-202ENST00000378800 BBOX1O75936 387 aa16.93■□□□□ 0.3
CCL19-202ENST00000378800 FKBP4Q02790 459 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCL19-202ENST00000378800 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
CCL19-202ENST00000378800 MRPL50Q8N5N7 158 aaKnown RBP16.93■□□□□ 0.3
CCL19-202ENST00000378800 ZNF277Q9NRM2 450 aaPredicted RBP16.93■□□□□ 0.3
CCL19-202ENST00000378800 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
CCL19-202ENST00000378800 H7C1W4 665 aa16.92■□□□□ 0.3
CCL19-202ENST00000378800 CC2D2BQ6DHV5 1058 aa16.92■□□□□ 0.3
CCL19-202ENST00000378800 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
CCL19-202ENST00000378800 ATP6V0A2Q9Y487 856 aa16.92■□□□□ 0.3
CCL19-202ENST00000378800 PDE8AO60658 829 aa16.91■□□□□ 0.3
CCL19-202ENST00000378800 GRAPQ13588 217 aa16.91■□□□□ 0.3
CCL19-202ENST00000378800 GCKRQ14397 625 aa16.91■□□□□ 0.3
CCL19-202ENST00000378800 LINS1Q8NG48 757 aa16.91■□□□□ 0.3
CCL19-202ENST00000378800 GRAPLQ8TC17 118 aaPredicted RBP16.91■□□□□ 0.3
CCL19-202ENST00000378800 NMRK2Q9NPI5 230 aa16.91■□□□□ 0.3
CCL19-202ENST00000378800 SNED1Q8TER0 1413 aa16.9■□□□□ 0.3
CCL19-202ENST00000378800 KIF3CO14782 793 aa16.9■□□□□ 0.3
CCL19-202ENST00000378800 BEND3Q5T5X7 828 aa16.9■□□□□ 0.3
CCL19-202ENST00000378800 SP8Q8IXZ3 490 aa16.9■□□□□ 0.3
CCL19-202ENST00000378800 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
CCL19-202ENST00000378800 PSMD1Q99460 953 aa16.9■□□□□ 0.3
CCL19-202ENST00000378800 SEC31BQ9NQW1 1179 aa16.9■□□□□ 0.3
CCL19-202ENST00000378800 CASP7P55210 303 aa16.89■□□□□ 0.29
CCL19-202ENST00000378800 CCDC85AQ96PX6 553 aaPredicted RBP16.89■□□□□ 0.29
CCL19-202ENST00000378800 BCL2L13Q9BXK5 485 aa16.89■□□□□ 0.29
CCL19-202ENST00000378800 GLTPD2A6NH11 291 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms