RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 CENPHQ9H3R5 247 aa12.27□□□□□ -0.45
ARHGEF39-201ENST00000378387 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 GOLGA5Q8TBA6 731 aa12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 CCDC12Q8WUD4 166 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 PSMA5P28066 241 aa12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 XPO4Q9C0E2 1151 aaKnown RBP12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 ZNF518AQ6AHZ1 1483 aa12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 RHOXF2BP0C7M4 288 aa12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 ETF1P62495 437 aaKnown RBP12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 BRF1Q92994 677 aa12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 RHOXF2Q9BQY4 288 aa12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 ERVK-7P63135 1459 aa12.26□□□□□ -0.45
ARHGEF39-201ENST00000378387 RPAP1Q9BWH6 1393 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 PTPRGP23470 1445 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 EIF2AK4Q9P2K8 1649 aaKnown RBP12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 CCP110O43303 1012 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 SRLQ86TD4 932 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 PDE11AQ9HCR9 933 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 ORC3Q9UBD5 711 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 ARHGAP5Q13017 1502 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 ACTN2P35609 894 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 PPP2R3AQ06190 1150 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 GPATCH3Q96I76 525 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 PRAM1Q96QH2 718 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 CLASRPQ8N2M8 674 aaKnown RBP12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 FBXO18Q8NFZ0 1043 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 RTL1A6NKG5 1358 aa12.25□□□□□ -0.45
ARHGEF39-201ENST00000378387 CLGNO14967 610 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 STK38Q15208 465 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 FSD1Q9BTV5 496 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 FTOQ9C0B1 505 aaKnown RBP eCLIP12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 JAK2O60674 1132 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 TOP1P11387 765 aaKnown RBP12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 SLFNL1Q499Z3 407 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 ANKRD20A12PQ8NF67 263 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 SGSM2O43147 1006 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 ERLIN1O75477 346 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 TDO2P48775 406 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 BRPF1P55201 1214 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 CT47A1Q5JQC4 288 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 WWC2Q6AWC2 1192 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 CYB5RLQ6IPT4 315 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 CCDC91Q7Z6B0 441 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 CCDC150Q8NCX0 1101 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 CPLX3Q8WVH0 158 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 HYPKQ9NX55 129 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 PLXNC1O60486 1568 aa12.24□□□□□ -0.45
ARHGEF39-201ENST00000378387 PRR29P0C7W0 189 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 RDXP35241 583 aaKnown RBP12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 CCT2P78371 535 aaKnown RBP12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 MRFAP1L1Q96HT8 127 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 TPCN1Q9ULQ1 816 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 A0A1B0GVL5 298 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 LIG3P49916 1009 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 PTH1RQ03431 593 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 KIF4BQ2VIQ3 1234 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 PPM1EQ8WY54 764 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 EIF3CLB5ME19 914 aaKnown RBP12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 ZSCAN12O43309 604 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 CAVIN2O95810 425 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 AKAP17AQ02040 695 aaKnown RBP12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 KLHL34Q8N239 644 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 GIMAP7Q8NHV1 300 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 COG3Q96JB2 828 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 GDAP1L1Q96MZ0 367 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 EIF3CQ99613 913 aaKnown RBP12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 LZTFL1Q9NQ48 299 aa12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 RBM8AQ9Y5S9 174 aaKnown RBP12.23□□□□□ -0.45
ARHGEF39-201ENST00000378387 MAP2K2P36507 400 aa12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 UBASH3AP57075 661 aa12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 NCAPGQ9BPX3 1015 aa12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 H2AFXP16104 143 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 CCZ1BP86790 482 aa12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 CCZ1P86791 482 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 LRRFIP1Q32MZ4 808 aaKnown RBP12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 PPP1R42Q7Z4L9 355 aa12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 ZNF526Q8TF50 670 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 PARD6BQ9BYG5 372 aa12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 ACBD3Q9H3P7 528 aa12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 ZRANB1Q9UGI0 708 aa12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 CFAP74Q9C0B2 1584 aa12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 E4F1Q66K89 784 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 FAN1Q9Y2M0 1017 aa12.22□□□□□ -0.45
ARHGEF39-201ENST00000378387 PTPRCP08575 1304 aa12.21□□□□□ -0.45
ARHGEF39-201ENST00000378387 CTAGE5O15320 804 aa12.21□□□□□ -0.45
ARHGEF39-201ENST00000378387 POLR3DP05423 398 aaPredicted RBP12.21□□□□□ -0.45
ARHGEF39-201ENST00000378387 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
ARHGEF39-201ENST00000378387 CCDC30Q5VVM6 783 aa12.21□□□□□ -0.45
ARHGEF39-201ENST00000378387 RHPN1Q8TCX5 695 aa12.21□□□□□ -0.45
ARHGEF39-201ENST00000378387 GOLGA1Q92805 767 aa12.21□□□□□ -0.45
ARHGEF39-201ENST00000378387 LONRF2Q1L5Z9 754 aa12.21□□□□□ -0.46
ARHGEF39-201ENST00000378387 CC2D1AQ6P1N0 951 aaPredicted RBP12.21□□□□□ -0.46
ARHGEF39-201ENST00000378387 PGBD1Q96JS3 809 aa12.21□□□□□ -0.46
ARHGEF39-201ENST00000378387 ELP1O95163 1332 aa12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 FOXR1Q6PIV2 292 aa12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 SYNE3Q6ZMZ3 975 aa12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 SMARCC1Q92922 1105 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 CDK19Q9BWU1 502 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms