RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 LRCH2Q5VUJ6 765 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 PHACTR3Q96KR7 559 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 NSD2O96028 1365 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 ICE2Q659A1 982 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 HSCBQ8IWL3 235 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 BORCS6Q96GS4 357 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 C4AP0C0L4 1744 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 C4BP0C0L5 1744 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 EXOC5O00471 708 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 ARMC3Q5W041 872 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 SLAIN2Q9P270 581 aa12.9□□□□□ -0.34
PCDHGA1-201ENST00000378105 DISP2A7MBM2 1401 aa12.89□□□□□ -0.35
PCDHGA1-201ENST00000378105 TMOD3Q9NYL9 352 aa12.89□□□□□ -0.35
PCDHGA1-201ENST00000378105 TULP2O00295 520 aa12.89□□□□□ -0.35
PCDHGA1-201ENST00000378105 IFIT2P09913 472 aaKnown RBP12.89□□□□□ -0.35
PCDHGA1-201ENST00000378105 CSPP1Q1MSJ5 1256 aa12.89□□□□□ -0.35
PCDHGA1-201ENST00000378105 BICDL1Q6ZP65 573 aa12.89□□□□□ -0.35
PCDHGA1-201ENST00000378105 ST7Q9NRC1 585 aa12.89□□□□□ -0.35
PCDHGA1-201ENST00000378105 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
PCDHGA1-201ENST00000378105 EYA1Q99502 592 aa12.89□□□□□ -0.35
PCDHGA1-201ENST00000378105 CENPFP49454 3210 aa12.89□□□□□ -0.35
PCDHGA1-201ENST00000378105 SEC24BO95487 1268 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 PDE6BP35913 854 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 C8orf34Q49A92 452 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 AMOTQ4VCS5 1084 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 MFSD4BQ5TF39 518 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 TTC19Q6DKK2 380 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 PICK1Q9NRD5 415 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 SIL1Q9H173 461 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 RASSF4Q9H2L5 321 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 TMEM94Q12767 1356 aa12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 CCT2P78371 535 aaKnown RBP12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 PPP1R1BQ9UD71 204 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA1-201ENST00000378105 SLIT2O94813 1529 aa12.87□□□□□ -0.35
PCDHGA1-201ENST00000378105 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
PCDHGA1-201ENST00000378105 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
PCDHGA1-201ENST00000378105 ACSBG1Q96GR2 724 aa12.87□□□□□ -0.35
PCDHGA1-201ENST00000378105 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
PCDHGA1-201ENST00000378105 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
PCDHGA1-201ENST00000378105 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
PCDHGA1-201ENST00000378105 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.87□□□□□ -0.35
PCDHGA1-201ENST00000378105 GNAI3P08754 354 aa12.86□□□□□ -0.35
PCDHGA1-201ENST00000378105 RARSP54136 660 aaKnown RBP12.86□□□□□ -0.35
PCDHGA1-201ENST00000378105 KRT24Q2M2I5 525 aa12.86□□□□□ -0.35
PCDHGA1-201ENST00000378105 EDC4Q6P2E9 1401 aaKnown RBP12.86□□□□□ -0.35
PCDHGA1-201ENST00000378105 TTLL5Q6EMB2 1281 aa12.86□□□□□ -0.35
PCDHGA1-201ENST00000378105 MBIPQ9NS73 344 aa12.86□□□□□ -0.35
PCDHGA1-201ENST00000378105 MTHFSDQ2M296 383 aaKnown RBP12.86□□□□□ -0.35
PCDHGA1-201ENST00000378105 IFNL2Q8IZJ0 200 aa12.86□□□□□ -0.35
PCDHGA1-201ENST00000378105 CAND2O75155 1236 aa12.85□□□□□ -0.35
PCDHGA1-201ENST00000378105 PDE3AQ14432 1141 aa12.85□□□□□ -0.35
PCDHGA1-201ENST00000378105 TSPYL1Q9H0U9 437 aa12.85□□□□□ -0.35
PCDHGA1-201ENST00000378105 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
PCDHGA1-201ENST00000378105 NOL7Q9UMY1 257 aaKnown RBP12.85□□□□□ -0.35
PCDHGA1-201ENST00000378105 VPS37DQ86XT2 251 aa12.85□□□□□ -0.35
PCDHGA1-201ENST00000378105 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
PCDHGA1-201ENST00000378105 CXorf56Q9H5V9 222 aa12.85□□□□□ -0.35
PCDHGA1-201ENST00000378105 IFT57Q9NWB7 429 aa12.85□□□□□ -0.35
PCDHGA1-201ENST00000378105 HOXC9P31274 260 aa12.84□□□□□ -0.35
PCDHGA1-201ENST00000378105 TERF2Q15554 542 aa12.84□□□□□ -0.35
PCDHGA1-201ENST00000378105 FBXW7Q969H0 707 aa12.84□□□□□ -0.35
PCDHGA1-201ENST00000378105 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
PCDHGA1-201ENST00000378105 IRAK4Q9NWZ3 460 aa12.84□□□□□ -0.35
PCDHGA1-201ENST00000378105 GOLGA6L22H0YM25 854 aa12.84□□□□□ -0.35
PCDHGA1-201ENST00000378105 FLT4P35916 1363 aa12.84□□□□□ -0.35
PCDHGA1-201ENST00000378105 NBPF11Q86T75 865 aa12.83□□□□□ -0.35
PCDHGA1-201ENST00000378105 SLC24A3Q9HC58 644 aa12.83□□□□□ -0.35
PCDHGA1-201ENST00000378105 TTC36A6NLP5 189 aa12.83□□□□□ -0.36
PCDHGA1-201ENST00000378105 GNAI2P04899 355 aa12.83□□□□□ -0.36
PCDHGA1-201ENST00000378105 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
PCDHGA1-201ENST00000378105 RPAINQ86UA6 219 aa12.83□□□□□ -0.36
PCDHGA1-201ENST00000378105 DIAPH3Q9NSV4 1193 aa12.83□□□□□ -0.36
PCDHGA1-201ENST00000378105 SOS2Q07890 1332 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA1-201ENST00000378105 SF3B2Q13435 895 aaKnown RBP12.83□□□□□ -0.36
PCDHGA1-201ENST00000378105 ZKSCAN5Q9Y2L8 839 aa12.83□□□□□ -0.36
PCDHGA1-201ENST00000378105 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
PCDHGA1-201ENST00000378105 ZBTB3Q9H5J0 574 aa12.83□□□□□ -0.36
PCDHGA1-201ENST00000378105 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
PCDHGA1-201ENST00000378105 NAA30Q147X3 362 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA1-201ENST00000378105 TMTC2Q8N394 836 aa12.82□□□□□ -0.36
PCDHGA1-201ENST00000378105 SRGAP3O43295 1099 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 TBC1D2Q9BYX2 928 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 IL1RAPL2Q9NP60 686 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 CAPN15O75808 1086 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 STARD3NLO95772 234 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 ANTXR1Q9H6X2 564 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 OGFRQ9NZT2 677 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 BTAF1O14981 1849 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 GUCY2CP25092 1073 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 CLASRPQ8N2M8 674 aaKnown RBP12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 CEP120Q8N960 986 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 ANO2Q9NQ90 1003 aa12.81□□□□□ -0.36
PCDHGA1-201ENST00000378105 JRKLQ9Y4A0 524 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms