RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SLX4Q8IY92 1834 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 ANKRD36CQ5JPF3 1778 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 KLRG2A4D1S0 409 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 ATP5J2-PTCD1G3V325 749 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 TCERG1O14776 1098 aaKnown RBP14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 ALDH1B1P30837 517 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 C1QTNF8P60827 252 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 NLRP10Q86W26 655 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 CHMP4AQ9BY43 222 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 TAOK3Q9H2K8 898 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 PHAXQ9H814 394 aaKnown RBP14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 TRMT112Q9UI30 125 aaKnown RBP14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 IL16Q14005 1332 aa14.91□□□□□ -0.02
SMARCE1-203ENST00000377808 TWISTNBQ3B726 338 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-203ENST00000377808 CCDC93Q567U6 631 aa14.91□□□□□ -0.02
SMARCE1-203ENST00000377808 RBM17Q96I25 401 aaKnown RBP14.91□□□□□ -0.02
SMARCE1-203ENST00000377808 NLRP3Q96P20 1036 aa14.91□□□□□ -0.02
SMARCE1-203ENST00000377808 STK31Q9BXU1 1019 aa14.91□□□□□ -0.02
SMARCE1-203ENST00000377808 ARFGEF2Q9Y6D5 1785 aa14.9□□□□□ -0.02
SMARCE1-203ENST00000377808 FANCIQ9NVI1 1328 aa14.9□□□□□ -0.02
SMARCE1-203ENST00000377808 HCLS1P14317 486 aaPredicted RBP14.9□□□□□ -0.02
SMARCE1-203ENST00000377808 OLFM4Q6UX06 510 aa14.9□□□□□ -0.02
SMARCE1-203ENST00000377808 C3orf67Q6ZVT6 689 aa14.9□□□□□ -0.02
SMARCE1-203ENST00000377808 WDR63Q8IWG1 891 aa14.9□□□□□ -0.02
SMARCE1-203ENST00000377808 SBF1O95248 1867 aa14.89□□□□□ -0.03
SMARCE1-203ENST00000377808 KDM2BQ8NHM5 1336 aa14.89□□□□□ -0.03
SMARCE1-203ENST00000377808 SH3TC1Q8TE82 1336 aa14.89□□□□□ -0.03
SMARCE1-203ENST00000377808 DDX58O95786 925 aaKnown RBP14.89□□□□□ -0.03
SMARCE1-203ENST00000377808 PRELPP51888 382 aa14.89□□□□□ -0.03
SMARCE1-203ENST00000377808 CRY2Q49AN0 593 aa14.89□□□□□ -0.03
SMARCE1-203ENST00000377808 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
SMARCE1-203ENST00000377808 MYD88Q99836 296 aa14.89□□□□□ -0.03
SMARCE1-203ENST00000377808 NMRK2Q9NPI5 230 aa14.89□□□□□ -0.03
SMARCE1-203ENST00000377808 RNF123Q5XPI4 1314 aa14.88□□□□□ -0.03
SMARCE1-203ENST00000377808 RIC1Q4ADV7 1423 aa14.88□□□□□ -0.03
SMARCE1-203ENST00000377808 RTL5Q5HYW3 569 aaPredicted RBP14.88□□□□□ -0.03
SMARCE1-203ENST00000377808 SYNE4Q8N205 404 aa14.88□□□□□ -0.03
SMARCE1-203ENST00000377808 TIAM2Q8IVF5 1701 aa14.87□□□□□ -0.03
SMARCE1-203ENST00000377808 PPEF1O14829 653 aaPredicted RBP14.87□□□□□ -0.03
SMARCE1-203ENST00000377808 C16orf71Q8IYS4 520 aaPredicted RBP14.87□□□□□ -0.03
SMARCE1-203ENST00000377808 ISCA1Q9BUE6 129 aa14.87□□□□□ -0.03
SMARCE1-203ENST00000377808 TMX4Q9H1E5 349 aaPredicted RBP14.87□□□□□ -0.03
SMARCE1-203ENST00000377808 FER1L6Q2WGJ9 1857 aa14.87□□□□□ -0.03
SMARCE1-203ENST00000377808 CCDC88AQ3V6T2 1871 aa14.87□□□□□ -0.03
SMARCE1-203ENST00000377808 ZC3H4Q9UPT8 1303 aaKnown RBP14.86□□□□□ -0.03
SMARCE1-203ENST00000377808 KIF3CO14782 793 aa14.86□□□□□ -0.03
SMARCE1-203ENST00000377808 FKBP4Q02790 459 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMARCE1-203ENST00000377808 EXOSC9Q06265 439 aaKnown RBP14.86□□□□□ -0.03
SMARCE1-203ENST00000377808 SLC10A5Q5PT55 438 aa14.86□□□□□ -0.03
SMARCE1-203ENST00000377808 RTKN2Q8IZC4 609 aa14.86□□□□□ -0.03
SMARCE1-203ENST00000377808 C7orf43Q8WVR3 580 aa14.86□□□□□ -0.03
SMARCE1-203ENST00000377808 FAM89AQ96GI7 184 aa14.86□□□□□ -0.03
SMARCE1-203ENST00000377808 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
SMARCE1-203ENST00000377808 ZNF277Q9NRM2 450 aaPredicted RBP14.86□□□□□ -0.03
SMARCE1-203ENST00000377808 LTBP3Q9NS15 1303 aa14.85□□□□□ -0.03
SMARCE1-203ENST00000377808 SLC4A2P04920 1241 aa14.85□□□□□ -0.03
SMARCE1-203ENST00000377808 HOXA10P31260 410 aaPredicted RBP14.85□□□□□ -0.03
SMARCE1-203ENST00000377808 DDX46Q7L014 1031 aaKnown RBP14.85□□□□□ -0.03
SMARCE1-203ENST00000377808 CRAMP1Q96RY5 1269 aa14.85□□□□□ -0.03
SMARCE1-203ENST00000377808 RRAGCQ9HB90 399 aa14.85□□□□□ -0.03
SMARCE1-203ENST00000377808 MAP3K2Q9Y2U5 619 aa14.85□□□□□ -0.03
SMARCE1-203ENST00000377808 ABCC4O15439 1325 aa14.84□□□□□ -0.03
SMARCE1-203ENST00000377808 DPY19L2Q6NUT2 758 aa14.84□□□□□ -0.03
SMARCE1-203ENST00000377808 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-203ENST00000377808 GLTPD2A6NH11 291 aa14.83□□□□□ -0.04
SMARCE1-203ENST00000377808 IRS4O14654 1257 aaPredicted RBP14.83□□□□□ -0.04
SMARCE1-203ENST00000377808 SLC51AQ86UW1 340 aa14.83□□□□□ -0.04
SMARCE1-203ENST00000377808 CWC25Q9NXE8 425 aaPredicted RBP14.83□□□□□ -0.04
SMARCE1-203ENST00000377808 LAMB2P55268 1798 aa14.82□□□□□ -0.04
SMARCE1-203ENST00000377808 PI4KAP2A4QPH2 592 aa14.82□□□□□ -0.04
SMARCE1-203ENST00000377808 NEXNQ0ZGT2 675 aa14.82□□□□□ -0.04
SMARCE1-203ENST00000377808 CC2D2BQ6DHV5 1058 aa14.82□□□□□ -0.04
SMARCE1-203ENST00000377808 KSR2Q6VAB6 950 aa14.82□□□□□ -0.04
SMARCE1-203ENST00000377808 G2E3Q7L622 706 aa14.82□□□□□ -0.04
SMARCE1-203ENST00000377808 PI4KAP1Q8N8J0 262 aa14.82□□□□□ -0.04
SMARCE1-203ENST00000377808 JARID2Q92833 1246 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-203ENST00000377808 METTL22Q9BUU2 404 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-203ENST00000377808 VAMP4O75379 141 aa14.81□□□□□ -0.04
SMARCE1-203ENST00000377808 IARSP41252 1262 aaKnown RBP14.81□□□□□ -0.04
SMARCE1-203ENST00000377808 FLIIQ13045 1269 aa14.81□□□□□ -0.04
SMARCE1-203ENST00000377808 TRIM28Q13263 835 aaKnown RBP14.81□□□□□ -0.04
SMARCE1-203ENST00000377808 FKBP5Q13451 457 aaPredicted RBP14.81□□□□□ -0.04
SMARCE1-203ENST00000377808 GRAPQ13588 217 aa14.81□□□□□ -0.04
SMARCE1-203ENST00000377808 ZBTB38Q8NAP3 1195 aaPredicted RBP14.81□□□□□ -0.04
SMARCE1-203ENST00000377808 CCDC191Q8NCU4 936 aa14.81□□□□□ -0.04
SMARCE1-203ENST00000377808 GRAPLQ8TC17 118 aaPredicted RBP14.81□□□□□ -0.04
SMARCE1-203ENST00000377808 DDX60Q8IY21 1712 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-203ENST00000377808 CCER2I3L3R5 266 aa14.8□□□□□ -0.04
SMARCE1-203ENST00000377808 TOMM70O94826 608 aa14.8□□□□□ -0.04
SMARCE1-203ENST00000377808 PSMD1Q99460 953 aa14.8□□□□□ -0.04
SMARCE1-203ENST00000377808 ATP6V0A2Q9Y487 856 aa14.8□□□□□ -0.04
SMARCE1-203ENST00000377808 DICER1Q9UPY3 1922 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-203ENST00000377808 BBOX1O75936 387 aa14.79□□□□□ -0.04
SMARCE1-203ENST00000377808 DDNO94850 711 aaPredicted RBP14.79□□□□□ -0.04
SMARCE1-203ENST00000377808 HSP90B1P14625 803 aaKnown RBP14.79□□□□□ -0.04
SMARCE1-203ENST00000377808 JDP2Q8WYK2 163 aa14.79□□□□□ -0.04
SMARCE1-203ENST00000377808 CCDC85AQ96PX6 553 aaPredicted RBP14.79□□□□□ -0.04
SMARCE1-203ENST00000377808 PCCAP05165 728 aaPredicted RBP14.78□□□□□ -0.04
SMARCE1-203ENST00000377808 VEGFAP15692 232 aaPredicted RBP14.78□□□□□ -0.04
SMARCE1-203ENST00000377808 CWF19L2Q2TBE0 894 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms