RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 UBE3BQ7Z3V4 1068 aa16.28■□□□□ 0.2
KRT40-201ENST00000377755 NLRP10Q86W26 655 aa16.28■□□□□ 0.2
KRT40-201ENST00000377755 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
KRT40-201ENST00000377755 SUCLG2Q96I99 432 aa16.28■□□□□ 0.2
KRT40-201ENST00000377755 UBN2Q6ZU65 1347 aa16.28■□□□□ 0.2
KRT40-201ENST00000377755 HMGB2P26583 209 aaKnown RBP16.27■□□□□ 0.2
KRT40-201ENST00000377755 RFC4P35249 363 aa16.27■□□□□ 0.2
KRT40-201ENST00000377755 CLEC4GQ6UXB4 293 aa16.27■□□□□ 0.2
KRT40-201ENST00000377755 UBR3Q6ZT12 1888 aa16.27■□□□□ 0.2
KRT40-201ENST00000377755 CENPQQ7L2Z9 268 aaPredicted RBP16.27■□□□□ 0.2
KRT40-201ENST00000377755 ZPR1O75312 459 aa16.26■□□□□ 0.19
KRT40-201ENST00000377755 BAG6P46379 1132 aa16.26■□□□□ 0.19
KRT40-201ENST00000377755 ANKRD36CQ5JPF3 1778 aa16.26■□□□□ 0.19
KRT40-201ENST00000377755 BCORQ6W2J9 1755 aa16.26■□□□□ 0.19
KRT40-201ENST00000377755 PNMA6EA0A0J9YXQ4 647 aa16.26■□□□□ 0.19
KRT40-201ENST00000377755 SSFA2P28290 1259 aa16.26■□□□□ 0.19
KRT40-201ENST00000377755 ATP8B2P98198 1209 aa16.26■□□□□ 0.19
KRT40-201ENST00000377755 TFCP2L1Q9NZI6 479 aa16.26■□□□□ 0.19
KRT40-201ENST00000377755 NIP7Q9Y221 180 aaKnown RBP eCLIP16.26■□□□□ 0.19
KRT40-201ENST00000377755 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
KRT40-201ENST00000377755 EPHA10Q5JZY3 1008 aa16.25■□□□□ 0.19
KRT40-201ENST00000377755 FAM89AQ96GI7 184 aa16.25■□□□□ 0.19
KRT40-201ENST00000377755 USP42Q9H9J4 1324 aaKnown RBP16.25■□□□□ 0.19
KRT40-201ENST00000377755 C4AP0C0L4 1744 aa16.25■□□□□ 0.19
KRT40-201ENST00000377755 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
KRT40-201ENST00000377755 SYNE4Q8N205 404 aa16.24■□□□□ 0.19
KRT40-201ENST00000377755 BICC1Q9H694 974 aaKnown RBP16.24■□□□□ 0.19
KRT40-201ENST00000377755 HDAC5Q9UQL6 1122 aa16.24■□□□□ 0.19
KRT40-201ENST00000377755 RGL2O15211 777 aa16.24■□□□□ 0.19
KRT40-201ENST00000377755 PCCAP05165 728 aaPredicted RBP16.24■□□□□ 0.19
KRT40-201ENST00000377755 TBC1D9BQ66K14 1250 aa16.24■□□□□ 0.19
KRT40-201ENST00000377755 PPP1R42Q7Z4L9 355 aa16.24■□□□□ 0.19
KRT40-201ENST00000377755 ZBTB38Q8NAP3 1195 aaPredicted RBP16.24■□□□□ 0.19
KRT40-201ENST00000377755 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
KRT40-201ENST00000377755 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
KRT40-201ENST00000377755 BICDL1Q6ZP65 573 aa16.23■□□□□ 0.19
KRT40-201ENST00000377755 CCDC125Q86Z20 511 aa16.23■□□□□ 0.19
KRT40-201ENST00000377755 ANO8Q9HCE9 1232 aaPredicted RBP16.23■□□□□ 0.19
KRT40-201ENST00000377755 TRMT112Q9UI30 125 aaKnown RBP16.23■□□□□ 0.19
KRT40-201ENST00000377755 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
KRT40-201ENST00000377755 RBM19Q9Y4C8 960 aaKnown RBP16.22■□□□□ 0.19
KRT40-201ENST00000377755 SRGAP3O43295 1099 aa16.22■□□□□ 0.19
KRT40-201ENST00000377755 FOXO4P98177 505 aa16.22■□□□□ 0.19
KRT40-201ENST00000377755 MTX1Q13505 466 aa16.22■□□□□ 0.19
KRT40-201ENST00000377755 COL23A1Q86Y22 540 aaPredicted RBP16.22■□□□□ 0.19
KRT40-201ENST00000377755 SMC5Q8IY18 1101 aa16.22■□□□□ 0.19
KRT40-201ENST00000377755 SSH3Q8TE77 659 aa16.22■□□□□ 0.19
KRT40-201ENST00000377755 HMMRO75330 724 aa16.21■□□□□ 0.19
KRT40-201ENST00000377755 GYS1P13807 737 aa16.21■□□□□ 0.19
KRT40-201ENST00000377755 POLA2Q14181 598 aa16.21■□□□□ 0.19
KRT40-201ENST00000377755 SKAP1Q86WV1 359 aa16.21■□□□□ 0.19
KRT40-201ENST00000377755 UTP14AQ9BVJ6 771 aaKnown RBP16.21■□□□□ 0.19
KRT40-201ENST00000377755 DCTPP1Q9H773 170 aa16.21■□□□□ 0.19
KRT40-201ENST00000377755 NTSR2O95665 410 aa16.2■□□□□ 0.18
KRT40-201ENST00000377755 SLC15A2Q16348 729 aa16.2■□□□□ 0.18
KRT40-201ENST00000377755 RABL6Q3YEC7 729 aaPredicted RBP16.2■□□□□ 0.18
KRT40-201ENST00000377755 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
KRT40-201ENST00000377755 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
KRT40-201ENST00000377755 TUBGCP6Q96RT7 1819 aa16.19■□□□□ 0.18
KRT40-201ENST00000377755 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
KRT40-201ENST00000377755 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
KRT40-201ENST00000377755 LMBR1LQ6UX01 489 aa16.19■□□□□ 0.18
KRT40-201ENST00000377755 NUTM1Q86Y26 1132 aa16.19■□□□□ 0.18
KRT40-201ENST00000377755 GCC1Q96CN9 775 aa16.19■□□□□ 0.18
KRT40-201ENST00000377755 SH3TC1Q8TE82 1336 aa16.18■□□□□ 0.18
KRT40-201ENST00000377755 NFIXQ14938 502 aa16.18■□□□□ 0.18
KRT40-201ENST00000377755 FLAD1Q8NFF5 587 aa16.18■□□□□ 0.18
KRT40-201ENST00000377755 PLA2G12BQ9BX93 195 aa16.18■□□□□ 0.18
KRT40-201ENST00000377755 STK32BQ9NY57 414 aa16.18■□□□□ 0.18
KRT40-201ENST00000377755 PDZRN3Q9UPQ7 1066 aa16.18■□□□□ 0.18
KRT40-201ENST00000377755 UPF1Q92900 1129 aaKnown RBP eCLIP16.17■□□□□ 0.18
KRT40-201ENST00000377755 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
KRT40-201ENST00000377755 HCLS1P14317 486 aaPredicted RBP16.17■□□□□ 0.18
KRT40-201ENST00000377755 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
KRT40-201ENST00000377755 KLHDC4Q8TBB5 520 aa16.16■□□□□ 0.18
KRT40-201ENST00000377755 PA2G4Q9UQ80 394 aaKnown RBP16.16■□□□□ 0.18
KRT40-201ENST00000377755 CHMP3Q9Y3E7 222 aa16.16■□□□□ 0.18
KRT40-201ENST00000377755 APBB1O00213 710 aa16.15■□□□□ 0.18
KRT40-201ENST00000377755 PDE8AO60658 829 aa16.15■□□□□ 0.18
KRT40-201ENST00000377755 SURF6O75683 361 aaKnown RBP16.15■□□□□ 0.18
KRT40-201ENST00000377755 CSF1RP07333 972 aa16.15■□□□□ 0.18
KRT40-201ENST00000377755 TM4SF1P30408 202 aa16.15■□□□□ 0.18
KRT40-201ENST00000377755 RFX5P48382 616 aaPredicted RBP16.15■□□□□ 0.18
KRT40-201ENST00000377755 ANKRD45Q5TZF3 282 aa16.15■□□□□ 0.18
KRT40-201ENST00000377755 NBPF5PQ86XG9 351 aaPredicted RBP16.15■□□□□ 0.18
KRT40-201ENST00000377755 CCDC85AQ96PX6 553 aaPredicted RBP16.15■□□□□ 0.18
KRT40-201ENST00000377755 NUCB1Q02818 461 aa16.15■□□□□ 0.18
KRT40-201ENST00000377755 TTLL11Q8NHH1 800 aa16.15■□□□□ 0.18
KRT40-201ENST00000377755 GTF2E1P29083 439 aaPredicted RBP16.14■□□□□ 0.17
KRT40-201ENST00000377755 CTSWP56202 376 aa16.14■□□□□ 0.17
KRT40-201ENST00000377755 TPTE2Q6XPS3 522 aa16.14■□□□□ 0.17
KRT40-201ENST00000377755 NYXQ9GZU5 481 aa16.14■□□□□ 0.17
KRT40-201ENST00000377755 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
KRT40-201ENST00000377755 PTPN12Q05209 780 aaKnown RBP16.13■□□□□ 0.17
KRT40-201ENST00000377755 CCDC24Q8N4L8 307 aa16.13■□□□□ 0.17
KRT40-201ENST00000377755 LNPKQ9C0E8 428 aa16.13■□□□□ 0.17
KRT40-201ENST00000377755 NOP58Q9Y2X3 529 aaKnown RBP16.13■□□□□ 0.17
KRT40-201ENST00000377755 CARMIL3Q8ND23 1372 aa16.13■□□□□ 0.17
KRT40-201ENST00000377755 SMARCA5O60264 1052 aaPredicted RBP16.12■□□□□ 0.17
KRT40-201ENST00000377755 DDR1Q08345 913 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms