RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 CCNL1Q9UK58 526 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-201ENST00000376266 ZNF428Q96B54 188 aa18.2■□□□□ 0.5
CCHCR1-201ENST00000376266 CHPF2Q9P2E5 772 aa18.2■□□□□ 0.5
CCHCR1-201ENST00000376266 ANXA1P04083 346 aa18.2■□□□□ 0.5
CCHCR1-201ENST00000376266 C1orf115Q9H7X2 142 aa18.2■□□□□ 0.5
CCHCR1-201ENST00000376266 A1BGP04217 495 aa18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 TEX13AQ9BXU3 409 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 TNS1Q9HBL0 1735 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 STARD3NLO95772 234 aa18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 CYP19A1P11511 503 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 ALDH1L2Q3SY69 923 aa18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 PROM2Q8N271 834 aa18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 LRRC4BQ9NT99 713 aa18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 PLSCR1O15162 318 aa18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 PROSER3Q2NL68 480 aa18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 STK31Q9BXU1 1019 aa18.19■□□□□ 0.5
CCHCR1-201ENST00000376266 LY75O60449 1722 aa18.18■□□□□ 0.5
CCHCR1-201ENST00000376266 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCHCR1-201ENST00000376266 TJP1Q07157 1748 aa18.18■□□□□ 0.5
CCHCR1-201ENST00000376266 TXNRD1Q16881 649 aa18.18■□□□□ 0.5
CCHCR1-201ENST00000376266 ZGPATQ8N5A5 531 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-201ENST00000376266 MRPL50Q8N5N7 158 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-201ENST00000376266 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
CCHCR1-201ENST00000376266 JARID2Q92833 1246 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-201ENST00000376266 MYL6BP14649 208 aa18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 CBX1P83916 185 aa18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 PDIA6Q15084 440 aa18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 CHMP4BQ9H444 224 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 NSFL1CQ9UNZ2 370 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 NBPF26B4DH59 902 aa18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 SF3B2Q13435 895 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 NBPF14Q5TI25 921 aa18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 NBPF10Q6P3W6 841 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 ILDR2Q71H61 639 aa18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 NBPF15Q8N660 670 aa18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 TSC1Q92574 1164 aa18.17■□□□□ 0.5
CCHCR1-201ENST00000376266 G2E3Q7L622 706 aa18.16■□□□□ 0.5
CCHCR1-201ENST00000376266 CHAMP1Q96JM3 812 aa18.16■□□□□ 0.5
CCHCR1-201ENST00000376266 CHMP4AQ9BY43 222 aa18.16■□□□□ 0.5
CCHCR1-201ENST00000376266 ZDHHC9Q9Y397 364 aa18.16■□□□□ 0.5
CCHCR1-201ENST00000376266 LAMB4A4D0S4 1761 aa18.16■□□□□ 0.5
CCHCR1-201ENST00000376266 ST18O60284 1047 aa18.16■□□□□ 0.5
CCHCR1-201ENST00000376266 PRIMPOLQ96LW4 560 aa18.16■□□□□ 0.5
CCHCR1-201ENST00000376266 CRKLP46109 303 aaKnown RBP18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 HMGN5P82970 282 aaKnown RBP18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 DEFB132Q7Z7B7 95 aa18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 USP26Q9BXU7 913 aa18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 PHAXQ9H814 394 aaKnown RBP18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 MBD3O95983 291 aa18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 FGD1P98174 961 aa18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 FOXD4L5Q5VV16 416 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 FOXD4L4Q8WXT5 416 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 GTPBP4Q9BZE4 634 aaKnown RBP18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 ZBTB1Q9Y2K1 713 aa18.15■□□□□ 0.5
CCHCR1-201ENST00000376266 GSPT1P15170 499 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-201ENST00000376266 SLC27A3Q5K4L6 730 aa18.14■□□□□ 0.49
CCHCR1-201ENST00000376266 INTS5Q6P9B9 1019 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-201ENST00000376266 TSPY26PQ9H489 355 aa18.14■□□□□ 0.49
CCHCR1-201ENST00000376266 EZH2Q15910 746 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-201ENST00000376266 ZNF710Q8N1W2 664 aa18.14■□□□□ 0.49
CCHCR1-201ENST00000376266 ZNF831Q5JPB2 1677 aa18.13■□□□□ 0.49
CCHCR1-201ENST00000376266 ZNF330Q9Y3S2 320 aaPredicted RBP18.13■□□□□ 0.49
CCHCR1-201ENST00000376266 CAMKK2Q96RR4 588 aa18.13■□□□□ 0.49
CCHCR1-201ENST00000376266 CCDC87Q9NVE4 849 aa18.13■□□□□ 0.49
CCHCR1-201ENST00000376266 BAG6P46379 1132 aa18.12■□□□□ 0.49
CCHCR1-201ENST00000376266 BRPF1P55201 1214 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-201ENST00000376266 PPP4R3BQ5MIZ7 849 aa18.12■□□□□ 0.49
CCHCR1-201ENST00000376266 LRP10Q7Z4F1 713 aa18.12■□□□□ 0.49
CCHCR1-201ENST00000376266 SIRT2Q8IXJ6 389 aa18.12■□□□□ 0.49
CCHCR1-201ENST00000376266 MPNDQ8N594 471 aa18.12■□□□□ 0.49
CCHCR1-201ENST00000376266 CICQ96RK0 1608 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-201ENST00000376266 AIMP1Q12904 312 aaKnown RBP18.12■□□□□ 0.49
CCHCR1-201ENST00000376266 HYPKQ9NX55 129 aa18.12■□□□□ 0.49
CCHCR1-201ENST00000376266 COL5A3P25940 1745 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-201ENST00000376266 MYH14Q7Z406 1995 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-201ENST00000376266 FLIIQ13045 1269 aa18.11■□□□□ 0.49
CCHCR1-201ENST00000376266 NOLC1Q14978 699 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCHCR1-201ENST00000376266 CCDC125Q86Z20 511 aa18.11■□□□□ 0.49
CCHCR1-201ENST00000376266 PLEKHM2Q8IWE5 1019 aa18.11■□□□□ 0.49
CCHCR1-201ENST00000376266 KIF20AO95235 890 aa18.1■□□□□ 0.49
CCHCR1-201ENST00000376266 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
CCHCR1-201ENST00000376266 SMIM5Q71RC9 77 aa18.1■□□□□ 0.49
CCHCR1-201ENST00000376266 PIBF1Q8WXW3 757 aa18.1■□□□□ 0.49
CCHCR1-201ENST00000376266 UPF1Q92900 1129 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCHCR1-201ENST00000376266 ZNF830Q96NB3 372 aaPredicted RBP18.1■□□□□ 0.49
CCHCR1-201ENST00000376266 TAF1LQ8IZX4 1826 aa18.1■□□□□ 0.49
CCHCR1-201ENST00000376266 GTF2F1P35269 517 aaKnown RBP eCLIP18.1■□□□□ 0.499e-12■■■■□ 26
CCHCR1-201ENST00000376266 COPS6Q7L5N1 327 aa18.1■□□□□ 0.49
CCHCR1-201ENST00000376266 XAGE3Q8WTP9 111 aa18.1■□□□□ 0.49
CCHCR1-201ENST00000376266 KIF3AQ9Y496 699 aa18.1■□□□□ 0.49
CCHCR1-201ENST00000376266 FKBP5Q13451 457 aaPredicted RBP18.09■□□□□ 0.49
CCHCR1-201ENST00000376266 ATP2B3Q16720 1220 aa18.09■□□□□ 0.49
CCHCR1-201ENST00000376266 CNTNAP4Q9C0A0 1308 aa18.09■□□□□ 0.49
CCHCR1-201ENST00000376266 SYAP1Q96A49 352 aaPredicted RBP18.09■□□□□ 0.49
CCHCR1-201ENST00000376266 FAM177BA6PVY3 158 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms