RNA–Protein interactions for RNA: ENST00000376227.3

CCDC22-201, Transcript of coiled-coil domain containing 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC22, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC22-201ENST00000376227 DDX21Q9NR30 783 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCDC22-201ENST00000376227 NMIQ13287 307 aaPredicted RBP18.09■□□□□ 0.49
CCDC22-201ENST00000376227 PROSER3Q2NL68 480 aa18.09■□□□□ 0.49
CCDC22-201ENST00000376227 TPRNQ4KMQ1 711 aa18.09■□□□□ 0.49
CCDC22-201ENST00000376227 LARP1BQ659C4 914 aaKnown RBP18.09■□□□□ 0.49
CCDC22-201ENST00000376227 PIBF1Q8WXW3 757 aa18.09■□□□□ 0.49
CCDC22-201ENST00000376227 SUCLG2Q96I99 432 aa18.09■□□□□ 0.49
CCDC22-201ENST00000376227 TPM3P06753 285 aa18.09■□□□□ 0.49
CCDC22-201ENST00000376227 BLOC1S2Q6QNY1 142 aa18.09■□□□□ 0.49
CCDC22-201ENST00000376227 FSD1Q9BTV5 496 aa18.09■□□□□ 0.49
CCDC22-201ENST00000376227 BICC1Q9H694 974 aaKnown RBP18.09■□□□□ 0.49
CCDC22-201ENST00000376227 GCP02774 474 aa18.08■□□□□ 0.48
CCDC22-201ENST00000376227 NEXNQ0ZGT2 675 aa18.08■□□□□ 0.48
CCDC22-201ENST00000376227 ARHGEF25Q86VW2 580 aa18.08■□□□□ 0.48
CCDC22-201ENST00000376227 FUCA2Q9BTY2 467 aa18.08■□□□□ 0.48
CCDC22-201ENST00000376227 FAM13BQ9NYF5 915 aa18.08■□□□□ 0.48
CCDC22-201ENST00000376227 HMG20BQ9P0W2 317 aa18.08■□□□□ 0.48
CCDC22-201ENST00000376227 SLC27A2O14975 620 aa18.07■□□□□ 0.48
CCDC22-201ENST00000376227 SASH1O94885 1247 aa18.07■□□□□ 0.48
CCDC22-201ENST00000376227 CCDC192P0DO97 292 aa18.07■□□□□ 0.48
CCDC22-201ENST00000376227 ANKLE2Q86XL3 938 aa18.07■□□□□ 0.48
CCDC22-201ENST00000376227 ANKRD24Q8TF21 1146 aa18.07■□□□□ 0.48
CCDC22-201ENST00000376227 EAF2Q96CJ1 260 aaPredicted RBP18.07■□□□□ 0.48
CCDC22-201ENST00000376227 ALDH8A1Q9H2A2 487 aaPredicted RBP18.07■□□□□ 0.48
CCDC22-201ENST00000376227 PXDNQ92626 1479 aa18.07■□□□□ 0.48
CCDC22-201ENST00000376227 GIMAP6Q6P9H5 292 aa18.07■□□□□ 0.48
CCDC22-201ENST00000376227 LARP1Q6PKG0 1096 aaKnown RBP18.07■□□□□ 0.48
CCDC22-201ENST00000376227 FAM227BQ96M60 508 aa18.07■□□□□ 0.48
CCDC22-201ENST00000376227 TPCN1Q9ULQ1 816 aa18.07■□□□□ 0.48
CCDC22-201ENST00000376227 RBM10P98175 930 aaKnown RBP18.06■□□□□ 0.48
CCDC22-201ENST00000376227 RIC3Q7Z5B4 369 aa18.06■□□□□ 0.48
CCDC22-201ENST00000376227 CCDC8Q9H0W5 538 aaPredicted RBP18.06■□□□□ 0.48
CCDC22-201ENST00000376227 ELP1O95163 1332 aa18.06■□□□□ 0.48
CCDC22-201ENST00000376227 HMGN5P82970 282 aaKnown RBP18.06■□□□□ 0.48
CCDC22-201ENST00000376227 NECAB1Q8N987 351 aa18.06■□□□□ 0.48
CCDC22-201ENST00000376227 PRIMPOLQ96LW4 560 aa18.06■□□□□ 0.48
CCDC22-201ENST00000376227 LMTK3Q96Q04 1460 aa18.06■□□□□ 0.48
CCDC22-201ENST00000376227 GOLGA6L6A8MZA4 724 aa18.05■□□□□ 0.48
CCDC22-201ENST00000376227 ST3GAL1Q11201 340 aa18.05■□□□□ 0.48
CCDC22-201ENST00000376227 AIMP1Q12904 312 aaKnown RBP18.05■□□□□ 0.48
CCDC22-201ENST00000376227 NOLC1Q14978 699 aaKnown RBP eCLIP18.05■□□□□ 0.48
CCDC22-201ENST00000376227 KRT32Q14532 448 aa18.05■□□□□ 0.48
CCDC22-201ENST00000376227 KAZALD1Q96I82 304 aa18.05■□□□□ 0.48
CCDC22-201ENST00000376227 BOLA2Q9H3K6 86 aa18.05■□□□□ 0.48
CCDC22-201ENST00000376227 TCHHQ07283 1943 aa18.04■□□□□ 0.48
CCDC22-201ENST00000376227 RPS6KB1P23443 525 aa18.04■□□□□ 0.48
CCDC22-201ENST00000376227 PLCB2Q00722 1185 aa18.04■□□□□ 0.48
CCDC22-201ENST00000376227 SCAND2PQ9GZW5 306 aaPredicted RBP18.04■□□□□ 0.48
CCDC22-201ENST00000376227 CHD2O14647 1828 aaKnown RBP18.04■□□□□ 0.48
CCDC22-201ENST00000376227 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
CCDC22-201ENST00000376227 SLIT3O75094 1523 aa18.03■□□□□ 0.48
CCDC22-201ENST00000376227 MED23Q9ULK4 1368 aa18.03■□□□□ 0.48
CCDC22-201ENST00000376227 A0A0D9SFI3 127 aa18.03■□□□□ 0.48
CCDC22-201ENST00000376227 PRAMEF22A3QJZ6 481 aa18.03■□□□□ 0.48
CCDC22-201ENST00000376227 GOLGA6L4A6NEF3 574 aa18.03■□□□□ 0.48
CCDC22-201ENST00000376227 MAP3K11Q16584 847 aa18.03■□□□□ 0.48
CCDC22-201ENST00000376227 TSGA10IPQ3SY00 556 aa18.03■□□□□ 0.48
CCDC22-201ENST00000376227 SIL1Q9H173 461 aa18.03■□□□□ 0.48
CCDC22-201ENST00000376227 NUP62CLQ9H1M0 184 aa18.03■□□□□ 0.48
CCDC22-201ENST00000376227 DDX54Q8TDD1 881 aaKnown RBP18.03■□□□□ 0.48
CCDC22-201ENST00000376227 TTC12Q9H892 705 aaPredicted RBP18.03■□□□□ 0.48
CCDC22-201ENST00000376227 RGPD2P0DJD1 1756 aa18.03■□□□□ 0.48
CCDC22-201ENST00000376227 MYRIPQ8NFW9 859 aa18.02■□□□□ 0.48
CCDC22-201ENST00000376227 CDC37L1Q7L3B6 337 aa18.01■□□□□ 0.47
CCDC22-201ENST00000376227 TTC6Q86TZ1 520 aa18.01■□□□□ 0.47
CCDC22-201ENST00000376227 FAM200AQ8TCP9 573 aa18.01■□□□□ 0.47
CCDC22-201ENST00000376227 ZNF830Q96NB3 372 aaPredicted RBP18.01■□□□□ 0.47
CCDC22-201ENST00000376227 TLR7Q9NYK1 1049 aaKnown RBP18.01■□□□□ 0.47
CCDC22-201ENST00000376227 IGKV5-2P06315 115 aa18.01■□□□□ 0.47
CCDC22-201ENST00000376227 PDIA6Q15084 440 aa18.01■□□□□ 0.47
CCDC22-201ENST00000376227 SPTLC3Q9NUV7 552 aa18.01■□□□□ 0.47
CCDC22-201ENST00000376227 NPHP4O75161 1426 aaPredicted RBP18.01■□□□□ 0.47
CCDC22-201ENST00000376227 JCADQ9P266 1359 aa18.01■□□□□ 0.47
CCDC22-201ENST00000376227 NEURL1BA8MQ27 555 aa18■□□□□ 0.47
CCDC22-201ENST00000376227 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
CCDC22-201ENST00000376227 ZNF790Q6PG37 636 aa18■□□□□ 0.47
CCDC22-201ENST00000376227 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
CCDC22-201ENST00000376227 MRC1P22897 1456 aa18■□□□□ 0.47
CCDC22-201ENST00000376227 GCKRQ14397 625 aa18■□□□□ 0.47
CCDC22-201ENST00000376227 MPNDQ8N594 471 aa18■□□□□ 0.47
CCDC22-201ENST00000376227 RBM33Q96EV2 1170 aaKnown RBP18■□□□□ 0.47
CCDC22-201ENST00000376227 SPATA32Q96LK8 384 aa18■□□□□ 0.47
CCDC22-201ENST00000376227 DDX19AQ9NUU7 478 aaKnown RBP18■□□□□ 0.47
CCDC22-201ENST00000376227 RFX7Q2KHR2 1363 aa18■□□□□ 0.47
CCDC22-201ENST00000376227 SETD1BQ9UPS6 1966 aaKnown RBP17.99■□□□□ 0.47
CCDC22-201ENST00000376227 FERMT3Q86UX7 667 aa17.99■□□□□ 0.47
CCDC22-201ENST00000376227 METTL22Q9BUU2 404 aaPredicted RBP17.99■□□□□ 0.47
CCDC22-201ENST00000376227 ATP5JP18859 108 aa17.99■□□□□ 0.47
CCDC22-201ENST00000376227 TOB2Q14106 344 aaPredicted RBP17.99■□□□□ 0.47
CCDC22-201ENST00000376227 RAPGEF4Q8WZA2 1011 aa17.99■□□□□ 0.47
CCDC22-201ENST00000376227 TNMDQ9H2S6 317 aa17.99■□□□□ 0.47
CCDC22-201ENST00000376227 COPRSQ9NQ92 184 aa17.99■□□□□ 0.47
CCDC22-201ENST00000376227 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.99■□□□□ 0.47
CCDC22-201ENST00000376227 CAMTA1Q9Y6Y1 1673 aa17.99■□□□□ 0.47
CCDC22-201ENST00000376227 TAF5LO75529 589 aa17.98■□□□□ 0.47
CCDC22-201ENST00000376227 USPL1Q5W0Q7 1092 aa17.98■□□□□ 0.47
CCDC22-201ENST00000376227 MYD88Q99836 296 aa17.98■□□□□ 0.47
CCDC22-201ENST00000376227 XAGE3Q8WTP9 111 aa17.98■□□□□ 0.47
CCDC22-201ENST00000376227 SLC52A2Q9HAB3 445 aa17.98■□□□□ 0.47
CCDC22-201ENST00000376227 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms