RNA–Protein interactions for RNA: ENST00000376093.6

LST1-208, leukocyte specific transcript 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LST1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-208ENST00000376093 EMILIN1Q9Y6C2 1016 aa16.4■□□□□ 0.22
LST1-208ENST00000376093 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
LST1-208ENST00000376093 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
LST1-208ENST00000376093 ZCRB1Q8TBF4 217 aaKnown RBP16.39■□□□□ 0.21
LST1-208ENST00000376093 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.21
LST1-208ENST00000376093 ARXQ96QS3 562 aa16.39■□□□□ 0.21
LST1-208ENST00000376093 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.39■□□□□ 0.21
LST1-208ENST00000376093 PPM1GO15355 546 aaPredicted RBP16.38■□□□□ 0.21
LST1-208ENST00000376093 GPR162Q16538 588 aa16.38■□□□□ 0.21
LST1-208ENST00000376093 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
LST1-208ENST00000376093 CGNL1Q0VF96 1302 aa16.38■□□□□ 0.21
LST1-208ENST00000376093 KIF24Q5T7B8 1368 aa16.38■□□□□ 0.21
LST1-208ENST00000376093 ADH1BP00325 375 aa16.36■□□□□ 0.21
LST1-208ENST00000376093 TATP17735 454 aaPredicted RBP16.36■□□□□ 0.21
LST1-208ENST00000376093 MAP3K5Q99683 1374 aa16.36■□□□□ 0.21
LST1-208ENST00000376093 LY75O60449 1722 aa16.36■□□□□ 0.21
LST1-208ENST00000376093 TRIM66O15016 1216 aa16.35■□□□□ 0.21
LST1-208ENST00000376093 THAP11Q96EK4 314 aa16.35■□□□□ 0.21
LST1-208ENST00000376093 PKD1L3Q7Z443 1732 aa16.35■□□□□ 0.21
LST1-208ENST00000376093 NSD2O96028 1365 aa16.35■□□□□ 0.21
LST1-208ENST00000376093 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
LST1-208ENST00000376093 TNNT2P45379 298 aaPredicted RBP16.34■□□□□ 0.21
LST1-208ENST00000376093 LRRC4BQ9NT99 713 aa16.34■□□□□ 0.21
LST1-208ENST00000376093 SLC27A5Q9Y2P5 690 aa16.34■□□□□ 0.21
LST1-208ENST00000376093 AK7Q96M32 723 aa16.33■□□□□ 0.2
LST1-208ENST00000376093 TOGARAM1Q9Y4F4 1720 aa16.33■□□□□ 0.2
LST1-208ENST00000376093 KDM4AO75164 1064 aa16.32■□□□□ 0.2
LST1-208ENST00000376093 ZNF827Q17R98 1081 aa16.32■□□□□ 0.2
LST1-208ENST00000376093 QSER1Q2KHR3 1735 aa16.32■□□□□ 0.2
LST1-208ENST00000376093 PCDH11XQ9BZA7 1347 aa16.32■□□□□ 0.2
LST1-208ENST00000376093 PCDH11YQ9BZA8 1340 aa16.32■□□□□ 0.2
LST1-208ENST00000376093 KCNQ4P56696 695 aa16.31■□□□□ 0.2
LST1-208ENST00000376093 ITGB4P16144 1822 aa16.31■□□□□ 0.2
LST1-208ENST00000376093 WASHC2AQ641Q2 1341 aa16.3■□□□□ 0.2
LST1-208ENST00000376093 GIGYF2Q6Y7W6 1299 aaKnown RBP16.3■□□□□ 0.2
LST1-208ENST00000376093 PARP9Q8IXQ6 854 aa16.3■□□□□ 0.2
LST1-208ENST00000376093 PANK3Q9H999 370 aa16.3■□□□□ 0.2
LST1-208ENST00000376093 POLKQ9UBT6 870 aa16.3■□□□□ 0.2
LST1-208ENST00000376093 NCAPD2Q15021 1401 aa16.29■□□□□ 0.2
LST1-208ENST00000376093 CEP350Q5VT06 3117 aa16.29■□□□□ 0.2
LST1-208ENST00000376093 RNF223E7ERA6 249 aa16.29■□□□□ 0.2
LST1-208ENST00000376093 S1PR4O95977 384 aa16.29■□□□□ 0.2
LST1-208ENST00000376093 GGCXP38435 758 aa16.29■□□□□ 0.2
LST1-208ENST00000376093 TTLL12Q14166 644 aaPredicted RBP16.29■□□□□ 0.2
LST1-208ENST00000376093 SLC27A3Q5K4L6 730 aa16.29■□□□□ 0.2
LST1-208ENST00000376093 SALL2Q9Y467 1007 aaPredicted RBP16.29■□□□□ 0.2
LST1-208ENST00000376093 C5P01031 1676 aa16.28■□□□□ 0.2
LST1-208ENST00000376093 SSTR3P32745 418 aaPredicted RBP16.28■□□□□ 0.2
LST1-208ENST00000376093 SPSB2Q99619 263 aa16.28■□□□□ 0.2
LST1-208ENST00000376093 SLC24A3Q9HC58 644 aa16.28■□□□□ 0.2
LST1-208ENST00000376093 CYP27B1O15528 508 aa16.27■□□□□ 0.2
LST1-208ENST00000376093 USP46P62068 366 aa16.27■□□□□ 0.2
LST1-208ENST00000376093 CCNL1Q9UK58 526 aaPredicted RBP16.27■□□□□ 0.2
LST1-208ENST00000376093 COL24A1Q17RW2 1714 aa16.26■□□□□ 0.19
LST1-208ENST00000376093 HOXA2O43364 376 aa16.26■□□□□ 0.19
LST1-208ENST00000376093 HLA-CQ95604 372 aa16.26■□□□□ 0.19
LST1-208ENST00000376093 TAF1LQ8IZX4 1826 aa16.25■□□□□ 0.19
LST1-208ENST00000376093 POLD1P28340 1107 aa16.25■□□□□ 0.19
LST1-208ENST00000376093 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
LST1-208ENST00000376093 GRIPAP1Q4V328 841 aa16.25■□□□□ 0.19
LST1-208ENST00000376093 BRICD5Q6PL45 260 aa16.25■□□□□ 0.19
LST1-208ENST00000376093 MPRIPQ6WCQ1 1025 aa16.25■□□□□ 0.19
LST1-208ENST00000376093 RNF19BQ6ZMZ0 732 aa16.25■□□□□ 0.19
LST1-208ENST00000376093 NLGN2Q8NFZ4 835 aa16.25■□□□□ 0.19
LST1-208ENST00000376093 TFCP2L1Q9NZI6 479 aa16.25■□□□□ 0.19
LST1-208ENST00000376093 PNPLA7Q6ZV29 1317 aa16.24■□□□□ 0.19
LST1-208ENST00000376093 GOLGB1Q14789 3259 aaKnown RBP16.24■□□□□ 0.19
LST1-208ENST00000376093 EMID1Q96A84 441 aaPredicted RBP16.24■□□□□ 0.19
LST1-208ENST00000376093 PRKD2Q9BZL6 878 aa16.24■□□□□ 0.19
LST1-208ENST00000376093 SLC6A16Q9GZN6 736 aa16.24■□□□□ 0.19
LST1-208ENST00000376093 SPG7Q9UQ90 795 aa16.24■□□□□ 0.19
LST1-208ENST00000376093 FAM160A2Q8N612 972 aaPredicted RBP16.23■□□□□ 0.19
LST1-208ENST00000376093 V9GY48 417 aaPredicted RBP16.23■□□□□ 0.19
LST1-208ENST00000376093 PALLDQ8WX93 1383 aa16.23■□□□□ 0.19
LST1-208ENST00000376093 FMNL1O95466 1100 aaPredicted RBP16.22■□□□□ 0.19
LST1-208ENST00000376093 MORC1Q86VD1 984 aa16.22■□□□□ 0.19
LST1-208ENST00000376093 ANKLE1Q8NAG6 615 aa16.22■□□□□ 0.19
LST1-208ENST00000376093 KNSTRNQ9Y448 316 aa16.22■□□□□ 0.19
LST1-208ENST00000376093 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.19
LST1-208ENST00000376093 ATP10DQ9P241 1426 aa16.21■□□□□ 0.19
LST1-208ENST00000376093 PPEF1O14829 653 aaPredicted RBP16.21■□□□□ 0.19
LST1-208ENST00000376093 YBX3P16989 372 aaKnown RBP eCLIP16.21■□□□□ 0.19
LST1-208ENST00000376093 SLC16A10Q8TF71 515 aa16.21■□□□□ 0.19
LST1-208ENST00000376093 MS4A1P11836 297 aa16.2■□□□□ 0.18
LST1-208ENST00000376093 PDE4DQ08499 809 aa16.2■□□□□ 0.18
LST1-208ENST00000376093 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
LST1-208ENST00000376093 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
LST1-208ENST00000376093 GRIN3BO60391 1043 aa16.18■□□□□ 0.18
LST1-208ENST00000376093 PHKG2P15735 406 aa16.18■□□□□ 0.18
LST1-208ENST00000376093 GUCA2AQ02747 115 aa16.18■□□□□ 0.18
LST1-208ENST00000376093 MSS51Q4VC12 460 aa16.18■□□□□ 0.18
LST1-208ENST00000376093 IFNL2Q8IZJ0 200 aa16.18■□□□□ 0.18
LST1-208ENST00000376093 PIGBQ92521 554 aa16.18■□□□□ 0.18
LST1-208ENST00000376093 SPIRE2Q8WWL2 714 aa16.17■□□□□ 0.18
LST1-208ENST00000376093 SMARCC1Q92922 1105 aaPredicted RBP16.17■□□□□ 0.18
LST1-208ENST00000376093 PRDM9Q9NQV7 894 aa16.17■□□□□ 0.18
LST1-208ENST00000376093 TMOD3Q9NYL9 352 aa16.17■□□□□ 0.18
LST1-208ENST00000376093 Q3C1V9 767 aa16.16■□□□□ 0.18
LST1-208ENST00000376093 GPBP1L1Q9HC44 474 aaPredicted RBP16.16■□□□□ 0.18
LST1-208ENST00000376093 UBR3Q6ZT12 1888 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms