RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PLCB2Q00722 1185 aa15.47■□□□□ 0.07
MSH5-204ENST00000375755 ABCA3Q99758 1704 aa15.46■□□□□ 0.07
MSH5-204ENST00000375755 PLCD3Q8N3E9 789 aa15.46■□□□□ 0.07
MSH5-204ENST00000375755 DIAPH3Q9NSV4 1193 aa15.46■□□□□ 0.07
MSH5-204ENST00000375755 MX1P20591 662 aa15.46■□□□□ 0.07
MSH5-204ENST00000375755 PDE1AP54750 535 aa15.46■□□□□ 0.07
MSH5-204ENST00000375755 PDIA6Q15084 440 aa15.46■□□□□ 0.07
MSH5-204ENST00000375755 CWF19L2Q2TBE0 894 aaKnown RBP15.46■□□□□ 0.07
MSH5-204ENST00000375755 BEND3Q5T5X7 828 aa15.46■□□□□ 0.07
MSH5-204ENST00000375755 DNAAF4Q8WXU2 420 aa15.46■□□□□ 0.07
MSH5-204ENST00000375755 ESYT1Q9BSJ8 1104 aa15.46■□□□□ 0.07
MSH5-204ENST00000375755 MAP3K2Q9Y2U5 619 aa15.46■□□□□ 0.07
MSH5-204ENST00000375755 TCHHQ07283 1943 aa15.46■□□□□ 0.06
MSH5-204ENST00000375755 COL5A2P05997 1499 aaPredicted RBP15.45■□□□□ 0.06
MSH5-204ENST00000375755 UPF3BQ9BZI7 483 aaKnown RBP15.45■□□□□ 0.06
MSH5-204ENST00000375755 SRCIN1Q9C0H9 1055 aa15.45■□□□□ 0.06
MSH5-204ENST00000375755 CNPY2Q9Y2B0 182 aa15.45■□□□□ 0.06
MSH5-204ENST00000375755 USP16Q9Y5T5 823 aa15.45■□□□□ 0.06
MSH5-204ENST00000375755 SOS1Q07889 1333 aaPredicted RBP15.45■□□□□ 0.06
MSH5-204ENST00000375755 WDR17Q8IZU2 1322 aa15.45■□□□□ 0.06
MSH5-204ENST00000375755 WDR33Q9C0J8 1336 aaKnown RBP15.45■□□□□ 0.06
MSH5-204ENST00000375755 CTIFO43310 598 aaKnown RBP15.45■□□□□ 0.06
MSH5-204ENST00000375755 TMEM87AQ8NBN3 555 aa15.45■□□□□ 0.06
MSH5-204ENST00000375755 DBF4Q9UBU7 674 aaPredicted RBP15.45■□□□□ 0.06
MSH5-204ENST00000375755 HOXB7P09629 217 aa15.45■□□□□ 0.06
MSH5-204ENST00000375755 DDX54Q8TDD1 881 aaKnown RBP15.45■□□□□ 0.06
MSH5-204ENST00000375755 UBTFL1P0CB47 393 aaPredicted RBP15.44■□□□□ 0.06
MSH5-204ENST00000375755 CHAF1AQ13111 956 aaPredicted RBP15.44■□□□□ 0.06
MSH5-204ENST00000375755 OSBPL3Q9H4L5 887 aa15.44■□□□□ 0.06
MSH5-204ENST00000375755 OVOS2A0A0G2JMS6 1433 aa15.44■□□□□ 0.06
MSH5-204ENST00000375755 GTF2E1P29083 439 aaPredicted RBP15.44■□□□□ 0.06
MSH5-204ENST00000375755 N4BP2Q86UW6 1770 aaPredicted RBP15.44■□□□□ 0.06
MSH5-204ENST00000375755 RPAP1Q9BWH6 1393 aaPredicted RBP15.44■□□□□ 0.06
MSH5-204ENST00000375755 NAP1L2Q9ULW6 460 aaPredicted RBP15.44■□□□□ 0.06
MSH5-204ENST00000375755 PKD1L3Q7Z443 1732 aa15.43■□□□□ 0.06
MSH5-204ENST00000375755 GNAI3P08754 354 aa15.43■□□□□ 0.06
MSH5-204ENST00000375755 ATP8B2P98198 1209 aa15.43■□□□□ 0.06
MSH5-204ENST00000375755 AHDC1Q5TGY3 1603 aaPredicted RBP15.43■□□□□ 0.06
MSH5-204ENST00000375755 PDIA4P13667 645 aaKnown RBP15.43■□□□□ 0.06
MSH5-204ENST00000375755 SPC24Q8NBT2 197 aa15.43■□□□□ 0.06
MSH5-204ENST00000375755 FUCA2Q9BTY2 467 aa15.43■□□□□ 0.06
MSH5-204ENST00000375755 MCCP23508 829 aa15.42■□□□□ 0.06
MSH5-204ENST00000375755 DCAF5Q96JK2 942 aa15.42■□□□□ 0.06
MSH5-204ENST00000375755 ANO2Q9NQ90 1003 aa15.42■□□□□ 0.06
MSH5-204ENST00000375755 GIMAP6Q6P9H5 292 aa15.42■□□□□ 0.06
MSH5-204ENST00000375755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.42■□□□□ 0.063e-7■■□□□ 13.8
MSH5-204ENST00000375755 CABP4P57796 275 aa15.42■□□□□ 0.06
MSH5-204ENST00000375755 EVA1CP58658 441 aa15.42■□□□□ 0.06
MSH5-204ENST00000375755 ANAPC15P60006 121 aa15.42■□□□□ 0.06
MSH5-204ENST00000375755 PPP1R42Q7Z4L9 355 aa15.42■□□□□ 0.06
MSH5-204ENST00000375755 ZCRB1Q8TBF4 217 aaKnown RBP15.42■□□□□ 0.06
MSH5-204ENST00000375755 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
MSH5-204ENST00000375755 PXDNLA1KZ92 1463 aa15.41■□□□□ 0.06
MSH5-204ENST00000375755 HMMRO75330 724 aa15.41■□□□□ 0.06
MSH5-204ENST00000375755 FEZ1Q99689 392 aa15.41■□□□□ 0.06
MSH5-204ENST00000375755 IL1RAPL2Q9NP60 686 aa15.41■□□□□ 0.06
MSH5-204ENST00000375755 BTG4Q9NY30 223 aa15.41■□□□□ 0.06
MSH5-204ENST00000375755 UBE2HP62256 183 aa15.4■□□□□ 0.06
MSH5-204ENST00000375755 ZNF771Q7L3S4 317 aaPredicted RBP15.4■□□□□ 0.06
MSH5-204ENST00000375755 OGFRQ9NZT2 677 aa15.4■□□□□ 0.06
MSH5-204ENST00000375755 CHMLP26374 656 aa15.4■□□□□ 0.06
MSH5-204ENST00000375755 ZBTB22O15209 634 aa15.39■□□□□ 0.05
MSH5-204ENST00000375755 KSR2Q6VAB6 950 aa15.39■□□□□ 0.05
MSH5-204ENST00000375755 XAGE3Q8WTP9 111 aa15.39■□□□□ 0.05
MSH5-204ENST00000375755 DDX21Q9NR30 783 aaKnown RBP eCLIP15.39■□□□□ 0.05
MSH5-204ENST00000375755 SRGAP3O43295 1099 aa15.39■□□□□ 0.05
MSH5-204ENST00000375755 COPS6Q7L5N1 327 aa15.39■□□□□ 0.05
MSH5-204ENST00000375755 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
MSH5-204ENST00000375755 TMEM51Q9NW97 253 aa15.39■□□□□ 0.05
MSH5-204ENST00000375755 CGNQ9P2M7 1197 aaKnown RBP15.39■□□□□ 0.05
MSH5-204ENST00000375755 FIBPO43427 364 aa15.38■□□□□ 0.05
MSH5-204ENST00000375755 ZSCAN22P10073 491 aaPredicted RBP15.38■□□□□ 0.05
MSH5-204ENST00000375755 SHANK3Q9BYB0 1731 aa15.38■□□□□ 0.05
MSH5-204ENST00000375755 ABCC6O95255 1503 aa15.38■□□□□ 0.05
MSH5-204ENST00000375755 SALL3Q9BXA9 1300 aa15.38■□□□□ 0.05
MSH5-204ENST00000375755 TPM3P06753 285 aa15.38■□□□□ 0.05
MSH5-204ENST00000375755 IL2RBP14784 551 aa15.38■□□□□ 0.05
MSH5-204ENST00000375755 CTNNA3Q9UI47 895 aa15.38■□□□□ 0.05
MSH5-204ENST00000375755 PTCD1O75127 700 aaKnown RBP15.37■□□□□ 0.05
MSH5-204ENST00000375755 RILPL2Q969X0 211 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 IL17RAQ96F46 866 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 CARD10Q9BWT7 1032 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 KAT6BQ8WYB5 2073 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 PTGS1P23219 599 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 LRRCC1Q9C099 1032 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 SURF6O75683 361 aaKnown RBP15.37■□□□□ 0.05
MSH5-204ENST00000375755 IGKV5-2P06315 115 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 LRP10Q7Z4F1 713 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 NUTM1Q86Y26 1132 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 SSH3Q8TE77 659 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 IL25Q9H293 177 aa15.37■□□□□ 0.05
MSH5-204ENST00000375755 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
MSH5-204ENST00000375755 COL16A1Q07092 1604 aaPredicted RBP15.37■□□□□ 0.05
MSH5-204ENST00000375755 TRIM6-TRIM34B2RNG4 842 aa15.36■□□□□ 0.05
MSH5-204ENST00000375755 NAA30Q147X3 362 aaPredicted RBP15.36■□□□□ 0.05
MSH5-204ENST00000375755 TAF3Q5VWG9 929 aa15.36■□□□□ 0.05
MSH5-204ENST00000375755 C9orf78Q9NZ63 289 aaPredicted RBP15.36■□□□□ 0.05
MSH5-204ENST00000375755 PA2G4Q9UQ80 394 aaKnown RBP15.36■□□□□ 0.05
MSH5-204ENST00000375755 COL22A1Q8NFW1 1626 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms