RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 SUSD4Q5VX71 490 aa22.43■■□□□ 1.18
C6orf48-204ENST00000375639 NBPF5PQ86XG9 351 aaPredicted RBP22.43■■□□□ 1.18
C6orf48-204ENST00000375639 FTSJ3Q8IY81 847 aaKnown RBP22.43■■□□□ 1.18
C6orf48-204ENST00000375639 SRCIN1Q9C0H9 1055 aa22.43■■□□□ 1.18
C6orf48-204ENST00000375639 NEURL1BA8MQ27 555 aa22.42■■□□□ 1.18
C6orf48-204ENST00000375639 NPHP1O15259 732 aa22.42■■□□□ 1.18
C6orf48-204ENST00000375639 PPP1R42Q7Z4L9 355 aa22.42■■□□□ 1.18
C6orf48-204ENST00000375639 DZIP1LQ8IYY4 767 aaKnown RBP22.42■■□□□ 1.18
C6orf48-204ENST00000375639 CCDC191Q8NCU4 936 aa22.42■■□□□ 1.18
C6orf48-204ENST00000375639 CWC25Q9NXE8 425 aaPredicted RBP22.42■■□□□ 1.18
C6orf48-204ENST00000375639 ABCC4O15439 1325 aa22.41■■□□□ 1.18
C6orf48-204ENST00000375639 MS4A1P11836 297 aa22.41■■□□□ 1.18
C6orf48-204ENST00000375639 GTF2E1P29083 439 aaPredicted RBP22.41■■□□□ 1.18
C6orf48-204ENST00000375639 UTP14AQ9BVJ6 771 aaKnown RBP22.41■■□□□ 1.18
C6orf48-204ENST00000375639 ALDH1L1O75891 902 aa22.4■■□□□ 1.18
C6orf48-204ENST00000375639 CCT4P50991 539 aaKnown RBP22.4■■□□□ 1.18
C6orf48-204ENST00000375639 RRP1P56182 461 aaKnown RBP22.4■■□□□ 1.18
C6orf48-204ENST00000375639 TPTE2Q6XPS3 522 aa22.4■■□□□ 1.18
C6orf48-204ENST00000375639 NYXQ9GZU5 481 aa22.4■■□□□ 1.18
C6orf48-204ENST00000375639 TRMT112Q9UI30 125 aaKnown RBP22.4■■□□□ 1.18
C6orf48-204ENST00000375639 SUPT16HQ9Y5B9 1047 aaKnown RBP22.4■■□□□ 1.18
C6orf48-204ENST00000375639 CNBD1Q8NA66 436 aa22.39■■□□□ 1.17
C6orf48-204ENST00000375639 SGIP1Q9BQI5 828 aa22.39■■□□□ 1.17
C6orf48-204ENST00000375639 PXDNLA1KZ92 1463 aa22.39■■□□□ 1.17
C6orf48-204ENST00000375639 NTSR2O95665 410 aa22.38■■□□□ 1.17
C6orf48-204ENST00000375639 RLBP1P12271 317 aa22.38■■□□□ 1.17
C6orf48-204ENST00000375639 GCKRQ14397 625 aa22.38■■□□□ 1.17
C6orf48-204ENST00000375639 RTL5Q5HYW3 569 aaPredicted RBP22.38■■□□□ 1.17
C6orf48-204ENST00000375639 INTS3Q68E01 1043 aaKnown RBP22.38■■□□□ 1.17
C6orf48-204ENST00000375639 CCDC24Q8N4L8 307 aa22.38■■□□□ 1.17
C6orf48-204ENST00000375639 TMEM57Q8N5G2 664 aa22.38■■□□□ 1.17
C6orf48-204ENST00000375639 PANK1Q8TE04 598 aa22.38■■□□□ 1.17
C6orf48-204ENST00000375639 AFDNP55196 1824 aaKnown RBP22.38■■□□□ 1.17
C6orf48-204ENST00000375639 COL24A1Q17RW2 1714 aa22.37■■□□□ 1.17
C6orf48-204ENST00000375639 PRR5LQ6MZQ0 368 aa22.37■■□□□ 1.17
C6orf48-204ENST00000375639 NUTM1Q86Y26 1132 aa22.37■■□□□ 1.17
C6orf48-204ENST00000375639 JARID2Q92833 1246 aaPredicted RBP22.37■■□□□ 1.17
C6orf48-204ENST00000375639 ERFEQ4G0M1 354 aa22.36■■□□□ 1.17
C6orf48-204ENST00000375639 FAM89AQ96GI7 184 aa22.36■■□□□ 1.17
C6orf48-204ENST00000375639 C9orf78Q9NZ63 289 aaPredicted RBP22.36■■□□□ 1.17
C6orf48-204ENST00000375639 IBTKQ9P2D0 1353 aaPredicted RBP22.36■■□□□ 1.17
C6orf48-204ENST00000375639 SH3TC1Q8TE82 1336 aa22.35■■□□□ 1.17
C6orf48-204ENST00000375639 CEP350Q5VT06 3117 aa22.35■■□□□ 1.17
C6orf48-204ENST00000375639 ST5P78524 1137 aa22.35■■□□□ 1.17
C6orf48-204ENST00000375639 C20orf194Q5TEA3 1177 aa22.35■■□□□ 1.17
C6orf48-204ENST00000375639 SYNE4Q8N205 404 aa22.35■■□□□ 1.17
C6orf48-204ENST00000375639 ZBTB38Q8NAP3 1195 aaPredicted RBP22.35■■□□□ 1.17
C6orf48-204ENST00000375639 PCCAP05165 728 aaPredicted RBP22.34■■□□□ 1.17
C6orf48-204ENST00000375639 PDE3AQ14432 1141 aa22.34■■□□□ 1.17
C6orf48-204ENST00000375639 UBE3BQ7Z3V4 1068 aa22.34■■□□□ 1.17
C6orf48-204ENST00000375639 ITPRIPQ8IWB1 547 aa22.34■■□□□ 1.17
C6orf48-204ENST00000375639 RNF123Q5XPI4 1314 aa22.33■■□□□ 1.17
C6orf48-204ENST00000375639 H7C1W4 665 aa22.33■■□□□ 1.17
C6orf48-204ENST00000375639 GRM8O00222 908 aa22.33■■□□□ 1.17
C6orf48-204ENST00000375639 KLHL34Q8N239 644 aa22.33■■□□□ 1.17
C6orf48-204ENST00000375639 COG6Q9Y2V7 657 aa22.32■■□□□ 1.16
C6orf48-204ENST00000375639 NRXN2Q9P2S2 1712 aa22.31■■□□□ 1.16
C6orf48-204ENST00000375639 IRS4O14654 1257 aaPredicted RBP22.31■■□□□ 1.16
C6orf48-204ENST00000375639 HCLS1P14317 486 aaPredicted RBP22.31■■□□□ 1.16
C6orf48-204ENST00000375639 USP44Q9H0E7 712 aa22.31■■□□□ 1.16
C6orf48-204ENST00000375639 ABCC12Q96J65 1359 aa22.3■■□□□ 1.16
C6orf48-204ENST00000375639 N4BP2Q86UW6 1770 aaPredicted RBP22.3■■□□□ 1.16
C6orf48-204ENST00000375639 NBPF7P0C2Y1 421 aaPredicted RBP22.29■■□□□ 1.16
C6orf48-204ENST00000375639 SLC10A5Q5PT55 438 aa22.29■■□□□ 1.16
C6orf48-204ENST00000375639 BRIP1Q9BX63 1249 aa22.29■■□□□ 1.16
C6orf48-204ENST00000375639 CDHR2Q9BYE9 1310 aa22.29■■□□□ 1.16
C6orf48-204ENST00000375639 HSP90B1P14625 803 aaKnown RBP22.28■■□□□ 1.16
C6orf48-204ENST00000375639 CASP7P55210 303 aa22.28■■□□□ 1.16
C6orf48-204ENST00000375639 MVPQ14764 893 aaKnown RBP22.28■■□□□ 1.16
C6orf48-204ENST00000375639 MEIS3Q99687 375 aa22.28■■□□□ 1.16
C6orf48-204ENST00000375639 UBTFL1P0CB47 393 aaPredicted RBP22.27■■□□□ 1.16
C6orf48-204ENST00000375639 C10orf71Q711Q0 1435 aa22.27■■□□□ 1.16
C6orf48-204ENST00000375639 NLRP3Q96P20 1036 aa22.27■■□□□ 1.16
C6orf48-204ENST00000375639 UTYO14607 1347 aa22.27■■□□□ 1.16
C6orf48-204ENST00000375639 GNAI3P08754 354 aa22.26■■□□□ 1.15
C6orf48-204ENST00000375639 PDE6BP35913 854 aa22.26■■□□□ 1.15
C6orf48-204ENST00000375639 GPR162Q16538 588 aa22.26■■□□□ 1.15
C6orf48-204ENST00000375639 DDX19BQ9UMR2 479 aa22.26■■□□□ 1.15
C6orf48-204ENST00000375639 CD2APQ9Y5K6 639 aa22.26■■□□□ 1.15
C6orf48-204ENST00000375639 ZBTB7BO15156 539 aaPredicted RBP22.25■■□□□ 1.15
C6orf48-204ENST00000375639 PDE8AO60658 829 aa22.25■■□□□ 1.15
C6orf48-204ENST00000375639 SUCLG2Q96I99 432 aa22.25■■□□□ 1.15
C6orf48-204ENST00000375639 C3orf67Q6ZVT6 689 aa22.24■■□□□ 1.15
C6orf48-204ENST00000375639 C2CD5Q86YS7 1000 aa22.23■■□□□ 1.15
C6orf48-204ENST00000375639 CRBNQ96SW2 442 aa22.23■■□□□ 1.15
C6orf48-204ENST00000375639 PLA2G12BQ9BX93 195 aa22.23■■□□□ 1.15
C6orf48-204ENST00000375639 HDAC5Q9UQL6 1122 aa22.23■■□□□ 1.15
C6orf48-204ENST00000375639 ANKRD31Q8N7Z5 1873 aa22.23■■□□□ 1.15
C6orf48-204ENST00000375639 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
C6orf48-204ENST00000375639 H0YIN7 160 aa22.22■■□□□ 1.15
C6orf48-204ENST00000375639 CHRNA5P30532 468 aa22.22■■□□□ 1.15
C6orf48-204ENST00000375639 CHMP4BQ9H444 224 aaKnown RBP22.22■■□□□ 1.15
C6orf48-204ENST00000375639 LRRFIP2Q9Y608 721 aaKnown RBP22.22■■□□□ 1.15
C6orf48-204ENST00000375639 DDX60Q8IY21 1712 aaKnown RBP22.22■■□□□ 1.15
C6orf48-204ENST00000375639 CTSWP56202 376 aa22.21■■□□□ 1.15
C6orf48-204ENST00000375639 TGFB2P61812 414 aa22.21■■□□□ 1.15
C6orf48-204ENST00000375639 IRX6P78412 446 aaPredicted RBP22.21■■□□□ 1.15
C6orf48-204ENST00000375639 EPHA10Q5JZY3 1008 aa22.21■■□□□ 1.15
C6orf48-204ENST00000375639 RPGRQ92834 1020 aaKnown RBP22.21■■□□□ 1.15
C6orf48-204ENST00000375639 KAZALD1Q96I82 304 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms