RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 MEIS3Q99687 375 aa17.71■□□□□ 0.43
TCEA3-201ENST00000374601 USP44Q9H0E7 712 aa17.71■□□□□ 0.43
TCEA3-201ENST00000374601 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.43
TCEA3-201ENST00000374601 ANKRD31Q8N7Z5 1873 aa17.7■□□□□ 0.42
TCEA3-201ENST00000374601 MSH5O43196 834 aa17.7■□□□□ 0.42
TCEA3-201ENST00000374601 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.42
TCEA3-201ENST00000374601 TNRC6CQ9HCJ0 1690 aaKnown RBP17.7■□□□□ 0.42
TCEA3-201ENST00000374601 UTYO14607 1347 aa17.7■□□□□ 0.42
TCEA3-201ENST00000374601 NFIXQ14938 502 aa17.69■□□□□ 0.42
TCEA3-201ENST00000374601 ZBTB40Q9NUA8 1239 aa17.69■□□□□ 0.42
TCEA3-201ENST00000374601 GRM8O00222 908 aa17.68■□□□□ 0.42
TCEA3-201ENST00000374601 NBPF7P0C2Y1 421 aaPredicted RBP17.68■□□□□ 0.42
TCEA3-201ENST00000374601 CASP7P55210 303 aa17.68■□□□□ 0.42
TCEA3-201ENST00000374601 PARP10Q53GL7 1025 aa17.68■□□□□ 0.42
TCEA3-201ENST00000374601 SUSD4Q5VX71 490 aa17.68■□□□□ 0.42
TCEA3-201ENST00000374601 BICDL1Q6ZP65 573 aa17.68■□□□□ 0.42
TCEA3-201ENST00000374601 CARMIL3Q8ND23 1372 aa17.67■□□□□ 0.42
TCEA3-201ENST00000374601 H7C1W4 665 aa17.67■□□□□ 0.42
TCEA3-201ENST00000374601 JARID2Q92833 1246 aaPredicted RBP17.67■□□□□ 0.42
TCEA3-201ENST00000374601 NTSR2O95665 410 aa17.66■□□□□ 0.42
TCEA3-201ENST00000374601 TM4SF1P30408 202 aa17.66■□□□□ 0.42
TCEA3-201ENST00000374601 DDR1Q08345 913 aa17.66■□□□□ 0.42
TCEA3-201ENST00000374601 R3HDM1Q15032 1099 aaKnown RBP17.66■□□□□ 0.42
TCEA3-201ENST00000374601 MSL1Q68DK7 614 aa17.66■□□□□ 0.42
TCEA3-201ENST00000374601 UBE3BQ7Z3V4 1068 aa17.66■□□□□ 0.42
TCEA3-201ENST00000374601 C9orf78Q9NZ63 289 aaPredicted RBP17.66■□□□□ 0.42
TCEA3-201ENST00000374601 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
TCEA3-201ENST00000374601 GNAI3P08754 354 aa17.65■□□□□ 0.42
TCEA3-201ENST00000374601 NLGN1Q8N2Q7 840 aa17.65■□□□□ 0.42
TCEA3-201ENST00000374601 ZBTB38Q8NAP3 1195 aaPredicted RBP17.65■□□□□ 0.42
TCEA3-201ENST00000374601 SETDB2Q96T68 719 aa17.65■□□□□ 0.42
TCEA3-201ENST00000374601 C1orf115Q9H7X2 142 aa17.65■□□□□ 0.42
TCEA3-201ENST00000374601 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
TCEA3-201ENST00000374601 UBTFL1P0CB47 393 aaPredicted RBP17.64■□□□□ 0.41
TCEA3-201ENST00000374601 SYNE4Q8N205 404 aa17.64■□□□□ 0.41
TCEA3-201ENST00000374601 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
TCEA3-201ENST00000374601 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
TCEA3-201ENST00000374601 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.41
TCEA3-201ENST00000374601 TRMT112Q9UI30 125 aaKnown RBP17.64■□□□□ 0.41
TCEA3-201ENST00000374601 LRRFIP2Q9Y608 721 aaKnown RBP17.64■□□□□ 0.41
TCEA3-201ENST00000374601 CDHR2Q9BYE9 1310 aa17.64■□□□□ 0.41
TCEA3-201ENST00000374601 ABCC12Q96J65 1359 aa17.64■□□□□ 0.41
TCEA3-201ENST00000374601 SPEF2Q9C093 1822 aa17.63■□□□□ 0.41
TCEA3-201ENST00000374601 KIF13BQ9NQT8 1826 aa17.63■□□□□ 0.41
TCEA3-201ENST00000374601 PSDA5PKW4 1024 aaPredicted RBP17.63■□□□□ 0.41
TCEA3-201ENST00000374601 POLRMTO00411 1230 aaKnown RBP17.63■□□□□ 0.41
TCEA3-201ENST00000374601 RTL5Q5HYW3 569 aaPredicted RBP17.63■□□□□ 0.41
TCEA3-201ENST00000374601 PPP1R42Q7Z4L9 355 aa17.63■□□□□ 0.41
TCEA3-201ENST00000374601 FAM89AQ96GI7 184 aa17.63■□□□□ 0.41
TCEA3-201ENST00000374601 SUCLG2Q96I99 432 aa17.63■□□□□ 0.41
TCEA3-201ENST00000374601 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
TCEA3-201ENST00000374601 COL11A2P13942 1736 aaPredicted RBP17.63■□□□□ 0.41
TCEA3-201ENST00000374601 TAF1P21675 1872 aa17.63■□□□□ 0.41
TCEA3-201ENST00000374601 MMP10P09238 476 aa17.62■□□□□ 0.41
TCEA3-201ENST00000374601 AAMPQ13685 434 aa17.62■□□□□ 0.41
TCEA3-201ENST00000374601 NBPF5PQ86XG9 351 aaPredicted RBP17.62■□□□□ 0.41
TCEA3-201ENST00000374601 NUTM1Q86Y26 1132 aa17.62■□□□□ 0.41
TCEA3-201ENST00000374601 SLC16A10Q8TF71 515 aa17.62■□□□□ 0.41
TCEA3-201ENST00000374601 GNAI2P04899 355 aa17.61■□□□□ 0.41
TCEA3-201ENST00000374601 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
TCEA3-201ENST00000374601 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
TCEA3-201ENST00000374601 ERICH6BQ5W0A0 696 aa17.61■□□□□ 0.41
TCEA3-201ENST00000374601 PCDHB15Q9Y5E8 787 aa17.61■□□□□ 0.41
TCEA3-201ENST00000374601 RIC1Q4ADV7 1423 aa17.61■□□□□ 0.41
TCEA3-201ENST00000374601 SERPINB2P05120 415 aa17.6■□□□□ 0.41
TCEA3-201ENST00000374601 ANKRD44Q8N8A2 993 aa17.6■□□□□ 0.41
TCEA3-201ENST00000374601 PLA2G12BQ9BX93 195 aa17.6■□□□□ 0.41
TCEA3-201ENST00000374601 NYXQ9GZU5 481 aa17.6■□□□□ 0.41
TCEA3-201ENST00000374601 DLEC1Q9Y238 1755 aa17.59■□□□□ 0.41
TCEA3-201ENST00000374601 IRS4O14654 1257 aaPredicted RBP17.59■□□□□ 0.41
TCEA3-201ENST00000374601 FOXO4P98177 505 aa17.59■□□□□ 0.41
TCEA3-201ENST00000374601 PRR5LQ6MZQ0 368 aa17.59■□□□□ 0.41
TCEA3-201ENST00000374601 CNBD1Q8NA66 436 aa17.59■□□□□ 0.41
TCEA3-201ENST00000374601 BICC1Q9H694 974 aaKnown RBP17.59■□□□□ 0.41
TCEA3-201ENST00000374601 KIAA1551Q9HCM1 1747 aa17.58■□□□□ 0.41
TCEA3-201ENST00000374601 COL4A1P02462 1669 aa17.58■□□□□ 0.41
TCEA3-201ENST00000374601 ZBTB7AO95365 584 aa17.58■□□□□ 0.4
TCEA3-201ENST00000374601 HCLS1P14317 486 aaPredicted RBP17.58■□□□□ 0.4
TCEA3-201ENST00000374601 SLC10A5Q5PT55 438 aa17.58■□□□□ 0.4
TCEA3-201ENST00000374601 CEP85Q6P2H3 762 aa17.58■□□□□ 0.4
TCEA3-201ENST00000374601 TPTE2Q6XPS3 522 aa17.58■□□□□ 0.4
TCEA3-201ENST00000374601 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.4
TCEA3-201ENST00000374601 CACNA1SQ13698 1873 aa17.58■□□□□ 0.4
TCEA3-201ENST00000374601 A0A1B0GUL6 1792 aa17.58■□□□□ 0.4
TCEA3-201ENST00000374601 RABL6Q3YEC7 729 aaPredicted RBP17.57■□□□□ 0.4
TCEA3-201ENST00000374601 SIRT2Q8IXJ6 389 aa17.57■□□□□ 0.4
TCEA3-201ENST00000374601 CCDC24Q8N4L8 307 aa17.57■□□□□ 0.4
TCEA3-201ENST00000374601 MTFR1LQ9H019 292 aa17.57■□□□□ 0.4
TCEA3-201ENST00000374601 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
TCEA3-201ENST00000374601 LRP5O75197 1615 aa17.57■□□□□ 0.4
TCEA3-201ENST00000374601 MTX1Q13505 466 aa17.56■□□□□ 0.4
TCEA3-201ENST00000374601 C3orf67Q6ZVT6 689 aa17.56■□□□□ 0.4
TCEA3-201ENST00000374601 PARP3Q9Y6F1 533 aa17.56■□□□□ 0.4
TCEA3-201ENST00000374601 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
TCEA3-201ENST00000374601 PDE8AO60658 829 aa17.55■□□□□ 0.4
TCEA3-201ENST00000374601 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
TCEA3-201ENST00000374601 CTSWP56202 376 aa17.55■□□□□ 0.4
TCEA3-201ENST00000374601 PNMA6EA0A0J9YXQ4 647 aa17.54■□□□□ 0.4
TCEA3-201ENST00000374601 ATP8B2P98198 1209 aa17.54■□□□□ 0.4
TCEA3-201ENST00000374601 LMBR1LQ6UX01 489 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms