RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 CCDC129Q6ZRS4 1044 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 CCDC91Q7Z6B0 441 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 SHTN1A0MZ66 631 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 MMP10P09238 476 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 TXNRD1Q16881 649 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 CCDC93Q567U6 631 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 SPTY2D1Q68D10 685 aaPredicted RBP7.34□□□□□ -1.23
PTPN3-202ENST00000374541 FMNL1O95466 1100 aaPredicted RBP7.34□□□□□ -1.23
PTPN3-202ENST00000374541 PPIP5K1Q6PFW1 1433 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 MKNK2Q9HBH9 465 aa7.34□□□□□ -1.23
PTPN3-202ENST00000374541 BAG3O95817 575 aa7.34□□□□□ -1.24
PTPN3-202ENST00000374541 FKBP4Q02790 459 aaKnown RBP eCLIP7.34□□□□□ -1.24
PTPN3-202ENST00000374541 SPOUT1Q5T280 376 aaKnown RBP7.34□□□□□ -1.24
PTPN3-202ENST00000374541 NLRP1Q9C000 1473 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 IRX3P78415 501 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-202ENST00000374541 CCDC96Q2M329 555 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 JAKMIP3Q5VZ66 844 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 MICALCLQ6ZW33 695 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 CEP57L1Q8IYX8 460 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 LRRCC1Q9C099 1032 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 FBXO3Q9UK99 471 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.33□□□□□ -1.24
PTPN3-202ENST00000374541 DLGAP5Q15398 846 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 TAF7Q15545 349 aaPredicted RBP7.33□□□□□ -1.24
PTPN3-202ENST00000374541 MAP9Q49MG5 647 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 DUOX2Q9NRD8 1548 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 SERPINC1P01008 464 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 DCAF5Q96JK2 942 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 NSD3Q9BZ95 1437 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 SMTNL1A8MU46 457 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 APAF1O14727 1248 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 SLC39A6Q13433 755 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 PICALMQ13492 652 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 CLASRPQ8N2M8 674 aaKnown RBP7.33□□□□□ -1.24
PTPN3-202ENST00000374541 GGA1Q9UJY5 639 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 TNFAIP1Q13829 316 aa7.33□□□□□ -1.24
PTPN3-202ENST00000374541 C14orf93Q9H972 538 aaKnown RBP7.33□□□□□ -1.24
PTPN3-202ENST00000374541 GOLGA6L10A0A0M3HER8 536 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 KRT85P78386 507 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 SLC10A4Q96EP9 437 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 KIAA1107Q9UPP5 1409 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 MATR3P43243 847 aaKnown RBP eCLIP7.32□□□□□ -1.24
PTPN3-202ENST00000374541 GSTO1P78417 241 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 BMS1Q14692 1282 aaKnown RBP7.32□□□□□ -1.24
PTPN3-202ENST00000374541 RNF214Q8ND24 703 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 ZSCAN31Q96LW9 406 aaPredicted RBP7.32□□□□□ -1.24
PTPN3-202ENST00000374541 FSD1Q9BTV5 496 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 IDH1O75874 414 aaKnown RBP7.32□□□□□ -1.24
PTPN3-202ENST00000374541 NFATC2IPQ8NCF5 419 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 TAF4BQ92750 862 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.32□□□□□ -1.24
PTPN3-202ENST00000374541 CALCOCO1Q9P1Z2 691 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 NOL7Q9UMY1 257 aaKnown RBP7.32□□□□□ -1.24
PTPN3-202ENST00000374541 POTEB2H3BUK9 544 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 POLR3GO15318 223 aaPredicted RBP7.32□□□□□ -1.24
PTPN3-202ENST00000374541 CDKL5O76039 1030 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 KRT18P05783 430 aaKnown RBP7.32□□□□□ -1.24
PTPN3-202ENST00000374541 CETN2P41208 172 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 PABPC4Q13310 644 aaKnown RBP eCLIP7.32□□□□□ -1.24
PTPN3-202ENST00000374541 PPP4R3AQ6IN85 833 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 ZSCAN25Q6NSZ9 544 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 TRIM22Q8IYM9 498 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 CCDC148Q8NFR7 591 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 TDO2P48775 406 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 NBPF11Q86T75 865 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 MTFR1LQ9H019 292 aa7.32□□□□□ -1.24
PTPN3-202ENST00000374541 ABCC5O15440 1437 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 STAMBPO95630 424 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 TNMDQ9H2S6 317 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 VPS72Q15906 364 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 SLC27A3Q5K4L6 730 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 MIS18AQ9NYP9 233 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 PDZRN3Q9UPQ7 1066 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 CROCC2H7BZ55 1655 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 ATP7AQ04656 1500 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 TMCO3Q6UWJ1 677 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 GADL1Q6ZQY3 521 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 DNAI2Q9GZS0 605 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 TSPYL2Q9H2G4 693 aaPredicted RBP7.31□□□□□ -1.24
PTPN3-202ENST00000374541 PDCL3Q9H2J4 239 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 CWC25Q9NXE8 425 aaPredicted RBP7.31□□□□□ -1.24
PTPN3-202ENST00000374541 ANKRD62A6NC57 917 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 ZSCAN12O43309 604 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 EMILIN1Q9Y6C2 1016 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 KIAA0232Q92628 1395 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 UQCRHLA0A096LP55 91 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 UQCRHP07919 91 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 KCNQ4P56696 695 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 TTLL5Q6EMB2 1281 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 USP48Q86UV5 1035 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 ZGPATQ8N5A5 531 aaKnown RBP7.31□□□□□ -1.24
PTPN3-202ENST00000374541 UBXN4Q92575 508 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 CRACR2AQ9BSW2 395 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 LNPKQ9C0E8 428 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 GRPEL1Q9HAV7 217 aa7.31□□□□□ -1.24
PTPN3-202ENST00000374541 TCOF1Q13428 1488 aaKnown RBP7.31□□□□□ -1.24
PTPN3-202ENST00000374541 PRPF40AO75400 957 aaKnown RBP7.3□□□□□ -1.24
PTPN3-202ENST00000374541 NOP2P46087 812 aaKnown RBP7.3□□□□□ -1.24
PTPN3-202ENST00000374541 TTC16Q8NEE8 873 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms