RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 TMOD3Q9NYL9 352 aa20.42■□□□□ 0.86
PHF1-202ENST00000374516 LRSAM1Q6UWE0 723 aa20.42■□□□□ 0.86
PHF1-202ENST00000374516 TTLL7Q6ZT98 887 aa20.42■□□□□ 0.86
PHF1-202ENST00000374516 PI4K2BQ8TCG2 481 aa20.42■□□□□ 0.86
PHF1-202ENST00000374516 GLI3P10071 1580 aa20.41■□□□□ 0.86
PHF1-202ENST00000374516 UBE3BQ7Z3V4 1068 aa20.41■□□□□ 0.86
PHF1-202ENST00000374516 TMEM63CQ9P1W3 806 aa20.41■□□□□ 0.86
PHF1-202ENST00000374516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.41■□□□□ 0.86
PHF1-202ENST00000374516 CHMLP26374 656 aa20.41■□□□□ 0.86
PHF1-202ENST00000374516 CLASRPQ8N2M8 674 aaKnown RBP20.41■□□□□ 0.86
PHF1-202ENST00000374516 PLBD2Q8NHP8 589 aa20.41■□□□□ 0.86
PHF1-202ENST00000374516 ASAP1Q9ULH1 1129 aa20.41■□□□□ 0.86
PHF1-202ENST00000374516 SHANK3Q9BYB0 1731 aa20.4■□□□□ 0.86
PHF1-202ENST00000374516 ADAMTS2O95450 1211 aa20.4■□□□□ 0.86
PHF1-202ENST00000374516 ZKSCAN5Q9Y2L8 839 aa20.4■□□□□ 0.86
PHF1-202ENST00000374516 RBM10P98175 930 aaKnown RBP20.39■□□□□ 0.86
PHF1-202ENST00000374516 PIGBQ92521 554 aa20.39■□□□□ 0.86
PHF1-202ENST00000374516 CHAMP1Q96JM3 812 aa20.39■□□□□ 0.86
PHF1-202ENST00000374516 ESYT1Q9BSJ8 1104 aa20.39■□□□□ 0.86
PHF1-202ENST00000374516 AOX1Q06278 1338 aa20.39■□□□□ 0.85
PHF1-202ENST00000374516 A0A087WZG4 1122 aa20.39■□□□□ 0.85
PHF1-202ENST00000374516 SYCE3A1L190 88 aa20.39■□□□□ 0.85
PHF1-202ENST00000374516 NSFL1CQ9UNZ2 370 aaKnown RBP20.39■□□□□ 0.85
PHF1-202ENST00000374516 KCPQ6ZWJ8 1503 aa20.38■□□□□ 0.85
PHF1-202ENST00000374516 MCM5P33992 734 aa20.38■□□□□ 0.85
PHF1-202ENST00000374516 G3BP1Q13283 466 aaKnown RBP eCLIP20.38■□□□□ 0.85
PHF1-202ENST00000374516 ZBTB3Q9H5J0 574 aa20.38■□□□□ 0.85
PHF1-202ENST00000374516 ZNF330Q9Y3S2 320 aaPredicted RBP20.38■□□□□ 0.85
PHF1-202ENST00000374516 SASH1O94885 1247 aa20.38■□□□□ 0.85
PHF1-202ENST00000374516 AACSQ86V21 672 aa20.37■□□□□ 0.85
PHF1-202ENST00000374516 ERC1Q8IUD2 1116 aa20.37■□□□□ 0.85
PHF1-202ENST00000374516 IL25Q9H293 177 aa20.37■□□□□ 0.85
PHF1-202ENST00000374516 IFIT2P09913 472 aaKnown RBP20.36■□□□□ 0.85
PHF1-202ENST00000374516 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
PHF1-202ENST00000374516 ANO2Q9NQ90 1003 aa20.36■□□□□ 0.85
PHF1-202ENST00000374516 CSPP1Q1MSJ5 1256 aa20.36■□□□□ 0.85
PHF1-202ENST00000374516 KAT6BQ8WYB5 2073 aa20.35■□□□□ 0.85
PHF1-202ENST00000374516 SYTL4Q96C24 671 aaPredicted RBP20.35■□□□□ 0.85
PHF1-202ENST00000374516 TMX3Q96JJ7 454 aa20.35■□□□□ 0.85
PHF1-202ENST00000374516 FAM13BQ9NYF5 915 aa20.35■□□□□ 0.85
PHF1-202ENST00000374516 TUBGCP6Q96RT7 1819 aa20.35■□□□□ 0.85
PHF1-202ENST00000374516 MBD3O95983 291 aa20.35■□□□□ 0.85
PHF1-202ENST00000374516 NEK4P51957 841 aa20.35■□□□□ 0.85
PHF1-202ENST00000374516 PIP4K2BP78356 416 aa20.35■□□□□ 0.85
PHF1-202ENST00000374516 FOXD4L5Q5VV16 416 aaPredicted RBP20.35■□□□□ 0.85
PHF1-202ENST00000374516 FOXD4L4Q8WXT5 416 aaPredicted RBP20.35■□□□□ 0.85
PHF1-202ENST00000374516 EAF2Q96CJ1 260 aaPredicted RBP20.35■□□□□ 0.85
PHF1-202ENST00000374516 CCDC8Q9H0W5 538 aaPredicted RBP20.35■□□□□ 0.85
PHF1-202ENST00000374516 ATG3Q9NT62 314 aa20.35■□□□□ 0.85
PHF1-202ENST00000374516 CCDC39Q9UFE4 941 aa20.35■□□□□ 0.85
PHF1-202ENST00000374516 EXOC5O00471 708 aa20.34■□□□□ 0.85
PHF1-202ENST00000374516 DNAJC10Q8IXB1 793 aa20.34■□□□□ 0.85
PHF1-202ENST00000374516 MAP7D2Q96T17 732 aa20.34■□□□□ 0.85
PHF1-202ENST00000374516 TOGARAM1Q9Y4F4 1720 aa20.34■□□□□ 0.85
PHF1-202ENST00000374516 TNS2Q63HR2 1409 aa20.34■□□□□ 0.85
PHF1-202ENST00000374516 UBR2Q8IWV8 1755 aa20.34■□□□□ 0.85
PHF1-202ENST00000374516 ECHDC1Q9NTX5 307 aa20.33■□□□□ 0.85
PHF1-202ENST00000374516 LAMB4A4D0S4 1761 aa20.33■□□□□ 0.85
PHF1-202ENST00000374516 NUTM2BA6NNL0 878 aaPredicted RBP20.33■□□□□ 0.84
PHF1-202ENST00000374516 NUTM2EB1AL46 878 aaPredicted RBP20.33■□□□□ 0.84
PHF1-202ENST00000374516 NUTM2AQ8IVF1 878 aaPredicted RBP20.33■□□□□ 0.84
PHF1-202ENST00000374516 TTC41PQ6P2S7 1318 aa20.33■□□□□ 0.84
PHF1-202ENST00000374516 UQCRHLA0A096LP55 91 aa20.32■□□□□ 0.84
PHF1-202ENST00000374516 GLRX3O76003 335 aaKnown RBP20.32■□□□□ 0.84
PHF1-202ENST00000374516 UQCRHP07919 91 aa20.32■□□□□ 0.84
PHF1-202ENST00000374516 CNTROBQ8N137 903 aa20.32■□□□□ 0.84
PHF1-202ENST00000374516 TLR7Q9NYK1 1049 aaKnown RBP20.32■□□□□ 0.84
PHF1-202ENST00000374516 ARFGEF2Q9Y6D5 1785 aa20.32■□□□□ 0.84
PHF1-202ENST00000374516 COL14A1Q05707 1796 aaKnown RBP20.32■□□□□ 0.84
PHF1-202ENST00000374516 BRD1O95696 1058 aa20.32■□□□□ 0.84
PHF1-202ENST00000374516 MCM2P49736 904 aa20.32■□□□□ 0.84
PHF1-202ENST00000374516 CASP7P55210 303 aa20.32■□□□□ 0.84
PHF1-202ENST00000374516 USP42Q9H9J4 1324 aaKnown RBP20.32■□□□□ 0.84
PHF1-202ENST00000374516 AHDC1Q5TGY3 1603 aaPredicted RBP20.31■□□□□ 0.84
PHF1-202ENST00000374516 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
PHF1-202ENST00000374516 DISP2A7MBM2 1401 aa20.31■□□□□ 0.84
PHF1-202ENST00000374516 LMBR1LQ6UX01 489 aa20.31■□□□□ 0.84
PHF1-202ENST00000374516 RNF214Q8ND24 703 aa20.31■□□□□ 0.84
PHF1-202ENST00000374516 CWC25Q9NXE8 425 aaPredicted RBP20.31■□□□□ 0.84
PHF1-202ENST00000374516 PALD1Q9ULE6 856 aa20.31■□□□□ 0.84
PHF1-202ENST00000374516 CHMP3Q9Y3E7 222 aa20.31■□□□□ 0.84
PHF1-202ENST00000374516 RFX5P48382 616 aaPredicted RBP20.3■□□□□ 0.84
PHF1-202ENST00000374516 PTPN12Q05209 780 aaKnown RBP20.3■□□□□ 0.84
PHF1-202ENST00000374516 COL16A1Q07092 1604 aaPredicted RBP20.3■□□□□ 0.84
PHF1-202ENST00000374516 PAPPAQ13219 1627 aa20.3■□□□□ 0.84
PHF1-202ENST00000374516 AFDNP55196 1824 aaKnown RBP20.3■□□□□ 0.84
PHF1-202ENST00000374516 CUL4AQ13619 759 aa20.3■□□□□ 0.84
PHF1-202ENST00000374516 RABL6Q3YEC7 729 aaPredicted RBP20.3■□□□□ 0.84
PHF1-202ENST00000374516 CWC27Q6UX04 472 aaKnown RBP20.3■□□□□ 0.84
PHF1-202ENST00000374516 GPATCH3Q96I76 525 aa20.3■□□□□ 0.84
PHF1-202ENST00000374516 H7C1W4 665 aa20.29■□□□□ 0.84
PHF1-202ENST00000374516 A0A0G2JS52 829 aa20.28■□□□□ 0.84
PHF1-202ENST00000374516 COPRSQ9NQ92 184 aa20.28■□□□□ 0.84
PHF1-202ENST00000374516 DYNC1I1O14576 645 aa20.28■□□□□ 0.84
PHF1-202ENST00000374516 FOXO4P98177 505 aa20.27■□□□□ 0.84
PHF1-202ENST00000374516 SLC4A9Q96Q91 983 aa20.27■□□□□ 0.84
PHF1-202ENST00000374516 TSPY26PQ9H489 355 aa20.27■□□□□ 0.84
PHF1-202ENST00000374516 TFCP2Q12800 502 aa20.27■□□□□ 0.84
PHF1-202ENST00000374516 INTS4Q96HW7 963 aaKnown RBP20.27■□□□□ 0.84
PHF1-202ENST00000374516 STARD3NLO95772 234 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms