RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 PREX1Q8TCU6 1659 aa9.26□□□□□ -0.93
HERC4-202ENST00000373700 VWDEQ8N2E2 1590 aa9.26□□□□□ -0.93
HERC4-202ENST00000373700 PKP1Q13835 747 aa9.25□□□□□ -0.93
HERC4-202ENST00000373700 SYNE3Q6ZMZ3 975 aa9.25□□□□□ -0.93
HERC4-202ENST00000373700 HCLS1P14317 486 aaPredicted RBP9.25□□□□□ -0.93
HERC4-202ENST00000373700 CCT2P78371 535 aaKnown RBP9.25□□□□□ -0.93
HERC4-202ENST00000373700 KRT85P78386 507 aa9.25□□□□□ -0.93
HERC4-202ENST00000373700 TFCP2Q12800 502 aa9.25□□□□□ -0.93
HERC4-202ENST00000373700 RAB3GAP1Q15042 981 aa9.25□□□□□ -0.93
HERC4-202ENST00000373700 SETBP1Q9Y6X0 1596 aa9.25□□□□□ -0.93
HERC4-202ENST00000373700 JAG2Q9Y219 1238 aa9.25□□□□□ -0.93
HERC4-202ENST00000373700 CPSF1Q10570 1443 aaKnown RBP9.25□□□□□ -0.93
HERC4-202ENST00000373700 CKAP2LQ8IYA6 745 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 CCDC82Q8N4S0 544 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 SOS1Q07889 1333 aaPredicted RBP9.24□□□□□ -0.93
HERC4-202ENST00000373700 IQGAP1P46940 1657 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 CYP27B1O15528 508 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 GJB2P29033 226 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 ME1P48163 572 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 TRIM29Q14134 588 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 ZSCAN23Q3MJ62 389 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 VSIG10Q8N0Z9 540 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 PIBF1Q8WXW3 757 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 RTL1A6NKG5 1358 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 PCDH11XQ9BZA7 1347 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 PCDH11YQ9BZA8 1340 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 AKAP17AQ02040 695 aaKnown RBP9.24□□□□□ -0.93
HERC4-202ENST00000373700 KLHL40Q2TBA0 621 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 DZIP3Q86Y13 1208 aaKnown RBP9.24□□□□□ -0.93
HERC4-202ENST00000373700 LRP2BPQ9P2M1 347 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 USP25Q9UHP3 1055 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 NRXN1Q9ULB1 1477 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 PES1O00541 588 aaKnown RBP9.24□□□□□ -0.93
HERC4-202ENST00000373700 TNMDQ9H2S6 317 aa9.24□□□□□ -0.93
HERC4-202ENST00000373700 NIP7Q9Y221 180 aaKnown RBP eCLIP9.24□□□□□ -0.93
HERC4-202ENST00000373700 DEPDC5O75140 1603 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 LRRC7Q96NW7 1537 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 CDK12Q9NYV4 1490 aaPredicted RBP9.23□□□□□ -0.93
HERC4-202ENST00000373700 PNPLA6Q8IY17 1366 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 STX6O43752 255 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 ZPR1O75312 459 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 ALDH1L1O75891 902 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 RAI14Q9P0K7 980 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 CCDC39Q9UFE4 941 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 CNPY2Q9Y2B0 182 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 MYO3AQ8NEV4 1616 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 TPM4P67936 248 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 TMEM131LA2VDJ0 1609 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 IGHMBP2P38935 993 aaKnown RBP9.23□□□□□ -0.93
HERC4-202ENST00000373700 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.23□□□□□ -0.93
HERC4-202ENST00000373700 CHST3Q7LGC8 479 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 EVI5LQ96CN4 794 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 DBNDD2Q9BQY9 259 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 RBM8AQ9Y5S9 174 aaKnown RBP9.23□□□□□ -0.93
HERC4-202ENST00000373700 ADGRL3Q9HAR2 1447 aa9.23□□□□□ -0.93
HERC4-202ENST00000373700 ANKRD18BA2A2Z9 1011 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 KINO60870 393 aaKnown RBP9.22□□□□□ -0.93
HERC4-202ENST00000373700 PALD1Q9ULE6 856 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 AK2P54819 239 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 GCKRQ14397 625 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 GIMAP6Q6P9H5 292 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 CCDC129Q6ZRS4 1044 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 UNC5CLQ8IV45 518 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 AGLP35573 1532 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 DHX16O60231 1041 aaKnown RBP9.22□□□□□ -0.93
HERC4-202ENST00000373700 STK38Q15208 465 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 BEND3Q5T5X7 828 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 FAM173BQ6P4H8 233 aa9.22□□□□□ -0.93
HERC4-202ENST00000373700 ZNF830Q96NB3 372 aaPredicted RBP9.22□□□□□ -0.93
HERC4-202ENST00000373700 METTL22Q9BUU2 404 aaPredicted RBP9.22□□□□□ -0.93
HERC4-202ENST00000373700 MINDY4BA8MYZ0 360 aa9.21□□□□□ -0.93
HERC4-202ENST00000373700 NMIQ13287 307 aaPredicted RBP9.21□□□□□ -0.93
HERC4-202ENST00000373700 ANKRD1Q15327 319 aa9.21□□□□□ -0.93
HERC4-202ENST00000373700 USP48Q86UV5 1035 aa9.21□□□□□ -0.93
HERC4-202ENST00000373700 ZSCAN31Q96LW9 406 aaPredicted RBP9.21□□□□□ -0.93
HERC4-202ENST00000373700 CCDC192P0DO97 292 aa9.21□□□□□ -0.94
HERC4-202ENST00000373700 ZSCAN30Q86W11 494 aa9.21□□□□□ -0.94
HERC4-202ENST00000373700 FAM227BQ96M60 508 aa9.21□□□□□ -0.94
HERC4-202ENST00000373700 RICTORQ6R327 1708 aa9.21□□□□□ -0.94
HERC4-202ENST00000373700 SMIM5Q71RC9 77 aa9.21□□□□□ -0.94
HERC4-202ENST00000373700 BRF1Q92994 677 aa9.21□□□□□ -0.94
HERC4-202ENST00000373700 NUP62CLQ9H1M0 184 aa9.21□□□□□ -0.94
HERC4-202ENST00000373700 MYO5BQ9ULV0 1848 aa9.2□□□□□ -0.94
HERC4-202ENST00000373700 NEURL1BA8MQ27 555 aa9.2□□□□□ -0.94
HERC4-202ENST00000373700 IRS4O14654 1257 aaPredicted RBP9.2□□□□□ -0.94
HERC4-202ENST00000373700 DNM1Q05193 864 aaKnown RBP9.2□□□□□ -0.94
HERC4-202ENST00000373700 CCDC144CPQ8IYA2 1237 aa9.2□□□□□ -0.94
HERC4-202ENST00000373700 CCAR2Q8N163 923 aaKnown RBP9.2□□□□□ -0.94
HERC4-202ENST00000373700 SPATA31A3Q5VYP0 1347 aa9.2□□□□□ -0.94
HERC4-202ENST00000373700 TDO2P48775 406 aa9.2□□□□□ -0.94
HERC4-202ENST00000373700 FILIP1Q7Z7B0 1213 aa9.2□□□□□ -0.94
HERC4-202ENST00000373700 NUP133Q8WUM0 1156 aa9.2□□□□□ -0.94
HERC4-202ENST00000373700 ZC3H13Q5T200 1668 aaKnown RBP9.2□□□□□ -0.94
HERC4-202ENST00000373700 PPLO60437 1756 aa9.2□□□□□ -0.94
HERC4-202ENST00000373700 ERICH2A1L162 156 aa9.2□□□□□ -0.94
HERC4-202ENST00000373700 AIDAQ96BJ3 306 aa9.2□□□□□ -0.94
HERC4-202ENST00000373700 RRAGDQ9NQL2 400 aaPredicted RBP9.2□□□□□ -0.94
HERC4-202ENST00000373700 LAMC1P11047 1609 aa9.19□□□□□ -0.94
HERC4-202ENST00000373700 CD163L1Q9NR16 1453 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms