RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 RNF123Q5XPI4 1314 aa23.32■■□□□ 1.32
PBX3-202ENST00000373482 TRIM28Q13263 835 aaKnown RBP23.31■■□□□ 1.32
PBX3-202ENST00000373482 TNRC6CQ9HCJ0 1690 aaKnown RBP23.31■■□□□ 1.32
PBX3-202ENST00000373482 ARFGEF1Q9Y6D6 1849 aa23.31■■□□□ 1.32
PBX3-202ENST00000373482 KIF16BQ96L93 1317 aa23.31■■□□□ 1.32
PBX3-202ENST00000373482 NTSR2O95665 410 aa23.3■■□□□ 1.32
PBX3-202ENST00000373482 BRPF1P55201 1214 aaPredicted RBP23.3■■□□□ 1.32
PBX3-202ENST00000373482 CCDC191Q8NCU4 936 aa23.3■■□□□ 1.32
PBX3-202ENST00000373482 BRIP1Q9BX63 1249 aa23.3■■□□□ 1.32
PBX3-202ENST00000373482 TRMT112Q9UI30 125 aaKnown RBP23.3■■□□□ 1.32
PBX3-202ENST00000373482 PDE6BP35913 854 aa23.29■■□□□ 1.32
PBX3-202ENST00000373482 NUTM1Q86Y26 1132 aa23.29■■□□□ 1.32
PBX3-202ENST00000373482 CCDC24Q8N4L8 307 aa23.29■■□□□ 1.32
PBX3-202ENST00000373482 NLGN2Q8NFZ4 835 aa23.29■■□□□ 1.32
PBX3-202ENST00000373482 PXDNLA1KZ92 1463 aa23.29■■□□□ 1.32
PBX3-202ENST00000373482 F6X3S4 739 aa23.28■■□□□ 1.32
PBX3-202ENST00000373482 CWC25Q9NXE8 425 aaPredicted RBP23.28■■□□□ 1.32
PBX3-202ENST00000373482 PDZRN3Q9UPQ7 1066 aa23.28■■□□□ 1.32
PBX3-202ENST00000373482 SH3TC1Q8TE82 1336 aa23.28■■□□□ 1.32
PBX3-202ENST00000373482 RIC1Q4ADV7 1423 aa23.27■■□□□ 1.32
PBX3-202ENST00000373482 ERFEQ4G0M1 354 aa23.27■■□□□ 1.32
PBX3-202ENST00000373482 SLC4A10Q6U841 1118 aa23.27■■□□□ 1.32
PBX3-202ENST00000373482 LINS1Q8NG48 757 aa23.27■■□□□ 1.32
PBX3-202ENST00000373482 NOB1Q9ULX3 412 aaKnown RBP23.27■■□□□ 1.32
PBX3-202ENST00000373482 A0A0G2JLW4 131 aa23.25■■□□□ 1.31
PBX3-202ENST00000373482 NEURL1BA8MQ27 555 aa23.25■■□□□ 1.31
PBX3-202ENST00000373482 H0YIN7 160 aa23.25■■□□□ 1.31
PBX3-202ENST00000373482 IPO8O15397 1037 aaKnown RBP23.25■■□□□ 1.31
PBX3-202ENST00000373482 BCAR3O75815 825 aa23.25■■□□□ 1.31
PBX3-202ENST00000373482 IGKV5-2P06315 115 aa23.25■■□□□ 1.31
PBX3-202ENST00000373482 ABCC12Q96J65 1359 aa23.25■■□□□ 1.31
PBX3-202ENST00000373482 DPEP1P16444 411 aa23.24■■□□□ 1.31
PBX3-202ENST00000373482 CWF19L2Q2TBE0 894 aaKnown RBP23.24■■□□□ 1.31
PBX3-202ENST00000373482 C2CD5Q86YS7 1000 aa23.24■■□□□ 1.31
PBX3-202ENST00000373482 ZBTB38Q8NAP3 1195 aaPredicted RBP23.24■■□□□ 1.31
PBX3-202ENST00000373482 API5Q9BZZ5 524 aaKnown RBP23.24■■□□□ 1.31
PBX3-202ENST00000373482 TAF1P21675 1872 aa23.24■■□□□ 1.31
PBX3-202ENST00000373482 DCAF8L1A6NGE4 600 aa23.23■■□□□ 1.31
PBX3-202ENST00000373482 HSP90B1P14625 803 aaKnown RBP23.23■■□□□ 1.31
PBX3-202ENST00000373482 ARHGAP45Q92619 1136 aa23.23■■□□□ 1.31
PBX3-202ENST00000373482 FRAT1Q92837 279 aaPredicted RBP23.23■■□□□ 1.31
PBX3-202ENST00000373482 FAM89AQ96GI7 184 aa23.23■■□□□ 1.31
PBX3-202ENST00000373482 PCCAP05165 728 aaPredicted RBP23.22■■□□□ 1.31
PBX3-202ENST00000373482 CHRNA5P30532 468 aa23.22■■□□□ 1.31
PBX3-202ENST00000373482 SLC10A5Q5PT55 438 aa23.22■■□□□ 1.31
PBX3-202ENST00000373482 BEND3Q5T5X7 828 aa23.22■■□□□ 1.31
PBX3-202ENST00000373482 NLRP3Q96P20 1036 aa23.22■■□□□ 1.31
PBX3-202ENST00000373482 SRCIN1Q9C0H9 1055 aa23.22■■□□□ 1.31
PBX3-202ENST00000373482 GCKRQ14397 625 aa23.21■■□□□ 1.31
PBX3-202ENST00000373482 RTL5Q5HYW3 569 aaPredicted RBP23.21■■□□□ 1.31
PBX3-202ENST00000373482 PIM2Q9P1W9 311 aa23.21■■□□□ 1.31
PBX3-202ENST00000373482 SLX4Q8IY92 1834 aa23.21■■□□□ 1.31
PBX3-202ENST00000373482 CHD4Q14839 1912 aa23.21■■□□□ 1.31
PBX3-202ENST00000373482 ALDH1L1O75891 902 aa23.2■■□□□ 1.3
PBX3-202ENST00000373482 RCAN3Q9UKA8 241 aa23.2■■□□□ 1.3
PBX3-202ENST00000373482 KLRG2A4D1S0 409 aaPredicted RBP23.19■■□□□ 1.3
PBX3-202ENST00000373482 HCLS1P14317 486 aaPredicted RBP23.19■■□□□ 1.3
PBX3-202ENST00000373482 PELP1Q8IZL8 1130 aaKnown RBP23.19■■□□□ 1.3
PBX3-202ENST00000373482 SYNE4Q8N205 404 aa23.19■■□□□ 1.3
PBX3-202ENST00000373482 ZNF622Q969S3 477 aaKnown RBP eCLIP23.19■■□□□ 1.3
PBX3-202ENST00000373482 MASTLQ96GX5 879 aa23.19■■□□□ 1.3
PBX3-202ENST00000373482 CDHR2Q9BYE9 1310 aa23.18■■□□□ 1.3
PBX3-202ENST00000373482 SPEF2Q9C093 1822 aa23.18■■□□□ 1.3
PBX3-202ENST00000373482 IRS4O14654 1257 aaPredicted RBP23.18■■□□□ 1.3
PBX3-202ENST00000373482 SRGNP10124 158 aa23.18■■□□□ 1.3
PBX3-202ENST00000373482 KCNA3P22001 575 aa23.18■■□□□ 1.3
PBX3-202ENST00000373482 ZKSCAN2Q63HK3 967 aa23.18■■□□□ 1.3
PBX3-202ENST00000373482 ATF7IPQ6VMQ6 1270 aa23.18■■□□□ 1.3
PBX3-202ENST00000373482 RPGRQ92834 1020 aaKnown RBP23.18■■□□□ 1.3
PBX3-202ENST00000373482 CCDC88AQ3V6T2 1871 aa23.17■■□□□ 1.3
PBX3-202ENST00000373482 NPR1P16066 1061 aa23.17■■□□□ 1.3
PBX3-202ENST00000373482 GPR162Q16538 588 aa23.17■■□□□ 1.3
PBX3-202ENST00000373482 STYK1Q6J9G0 422 aa23.17■■□□□ 1.3
PBX3-202ENST00000373482 CCT4P50991 539 aaKnown RBP23.16■■□□□ 1.3
PBX3-202ENST00000373482 CRY2Q49AN0 593 aa23.16■■□□□ 1.3
PBX3-202ENST00000373482 UBE3BQ7Z3V4 1068 aa23.16■■□□□ 1.3
PBX3-202ENST00000373482 CNKSR1Q969H4 720 aa23.16■■□□□ 1.3
PBX3-202ENST00000373482 C9orf78Q9NZ63 289 aaPredicted RBP23.16■■□□□ 1.3
PBX3-202ENST00000373482 WWC3Q9ULE0 1092 aa23.16■■□□□ 1.3
PBX3-202ENST00000373482 H7C1W4 665 aa23.15■■□□□ 1.3
PBX3-202ENST00000373482 PDE8AO60658 829 aa23.15■■□□□ 1.3
PBX3-202ENST00000373482 DALRD3Q5D0E6 543 aaKnown RBP23.15■■□□□ 1.3
PBX3-202ENST00000373482 TTLL6Q8N841 843 aa23.15■■□□□ 1.3
PBX3-202ENST00000373482 JARID2Q92833 1246 aaPredicted RBP23.15■■□□□ 1.3
PBX3-202ENST00000373482 BCS1LQ9Y276 419 aa23.15■■□□□ 1.3
PBX3-202ENST00000373482 TRIM27P14373 513 aa23.14■■□□□ 1.29
PBX3-202ENST00000373482 ALDH1B1P30837 517 aa23.14■■□□□ 1.29
PBX3-202ENST00000373482 RBM17Q96I25 401 aaKnown RBP23.14■■□□□ 1.29
PBX3-202ENST00000373482 ABCC4O15439 1325 aa23.13■■□□□ 1.29
PBX3-202ENST00000373482 GRM8O00222 908 aa23.13■■□□□ 1.29
PBX3-202ENST00000373482 FER1L6Q2WGJ9 1857 aa23.13■■□□□ 1.29
PBX3-202ENST00000373482 C3orf67Q6ZVT6 689 aa23.12■■□□□ 1.29
PBX3-202ENST00000373482 FTSJ3Q8IY81 847 aaKnown RBP23.12■■□□□ 1.29
PBX3-202ENST00000373482 SBF1O95248 1867 aa23.11■■□□□ 1.29
PBX3-202ENST00000373482 HOXA10P31260 410 aaPredicted RBP23.11■■□□□ 1.29
PBX3-202ENST00000373482 SF3B3Q15393 1217 aaKnown RBP23.11■■□□□ 1.29
PBX3-202ENST00000373482 CLUAP1Q96AJ1 413 aa23.11■■□□□ 1.29
PBX3-202ENST00000373482 MS4A1P11836 297 aa23.1■■□□□ 1.29
PBX3-202ENST00000373482 CASP7P55210 303 aa23.1■■□□□ 1.29
PBX3-202ENST00000373482 INTS3Q68E01 1043 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms