RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 USP5P45974 858 aa16.38■□□□□ 0.21
LMX1B-202ENST00000373474 USP48Q86UV5 1035 aa16.38■□□□□ 0.21
LMX1B-202ENST00000373474 CNPY2Q9Y2B0 182 aa16.38■□□□□ 0.21
LMX1B-202ENST00000373474 RAB3GAP1Q15042 981 aa16.38■□□□□ 0.21
LMX1B-202ENST00000373474 SHANK2Q9UPX8 1470 aa16.38■□□□□ 0.21
LMX1B-202ENST00000373474 ZNF76P36508 570 aa16.38■□□□□ 0.21
LMX1B-202ENST00000373474 CEP135Q66GS9 1140 aa16.38■□□□□ 0.21
LMX1B-202ENST00000373474 SMC5Q8IY18 1101 aa16.38■□□□□ 0.21
LMX1B-202ENST00000373474 USP16Q9Y5T5 823 aa16.38■□□□□ 0.21
LMX1B-202ENST00000373474 SNW1Q13573 536 aaKnown RBP16.37■□□□□ 0.21
LMX1B-202ENST00000373474 NUP88Q99567 741 aaPredicted RBP16.37■□□□□ 0.21
LMX1B-202ENST00000373474 ZHX1Q9UKY1 873 aaPredicted RBP16.37■□□□□ 0.21
LMX1B-202ENST00000373474 ZMYM4Q5VZL5 1548 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 GOLGA6L9A6NEM1 432 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 RBM5P52756 815 aaKnown RBP eCLIP16.37■□□□□ 0.21
LMX1B-202ENST00000373474 GIMAP6Q6P9H5 292 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 PPIP5K1Q6PFW1 1433 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 YEATS4O95619 227 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 MNAT1P51948 309 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 ATP8B2P98198 1209 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 IFFO1Q0D2I5 559 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 PAF1Q8N7H5 531 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 HCLS1P14317 486 aaPredicted RBP16.37■□□□□ 0.21
LMX1B-202ENST00000373474 BICDL1Q6ZP65 573 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 IQCA1Q86XH1 822 aa16.37■□□□□ 0.21
LMX1B-202ENST00000373474 FGFR1OPO95684 399 aaKnown RBP16.36■□□□□ 0.21
LMX1B-202ENST00000373474 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
LMX1B-202ENST00000373474 CWC25Q9NXE8 425 aaPredicted RBP16.36■□□□□ 0.21
LMX1B-202ENST00000373474 DNMT1P26358 1616 aaKnown RBP16.36■□□□□ 0.21
LMX1B-202ENST00000373474 C8orf58Q8NAV2 365 aa16.36■□□□□ 0.21
LMX1B-202ENST00000373474 NCOA7Q8NI08 942 aa16.36■□□□□ 0.21
LMX1B-202ENST00000373474 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
LMX1B-202ENST00000373474 COL17A1Q9UMD9 1497 aaPredicted RBP16.35■□□□□ 0.21
LMX1B-202ENST00000373474 BIN1O00499 593 aa16.35■□□□□ 0.21
LMX1B-202ENST00000373474 POLR3DP05423 398 aaPredicted RBP16.35■□□□□ 0.21
LMX1B-202ENST00000373474 RANBP6O60518 1105 aaKnown RBP16.35■□□□□ 0.21
LMX1B-202ENST00000373474 IRX3P78415 501 aaPredicted RBP16.35■□□□□ 0.21
LMX1B-202ENST00000373474 CATIPQ7Z7H3 387 aa16.35■□□□□ 0.21
LMX1B-202ENST00000373474 TTC21AQ8NDW8 1320 aa16.35■□□□□ 0.21
LMX1B-202ENST00000373474 IBSPP21815 317 aaPredicted RBP16.35■□□□□ 0.21
LMX1B-202ENST00000373474 IARSP41252 1262 aaKnown RBP16.35■□□□□ 0.21
LMX1B-202ENST00000373474 KANK3Q6NY19 840 aa16.35■□□□□ 0.21
LMX1B-202ENST00000373474 ORC3Q9UBD5 711 aaPredicted RBP16.35■□□□□ 0.21
LMX1B-202ENST00000373474 TRMT112Q9UI30 125 aaKnown RBP16.35■□□□□ 0.21
LMX1B-202ENST00000373474 PAFAH1B1P43034 410 aa16.35■□□□□ 0.21
LMX1B-202ENST00000373474 TESK2Q96S53 571 aa16.35■□□□□ 0.21
LMX1B-202ENST00000373474 ZFYVE9O95405 1425 aa16.35■□□□□ 0.21
LMX1B-202ENST00000373474 PPP1R12BO60237 982 aaPredicted RBP16.34■□□□□ 0.21
LMX1B-202ENST00000373474 NLRP5P59047 1200 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 C6orf163Q5TEZ5 329 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 PUS7Q96PZ0 661 aaKnown RBP16.34■□□□□ 0.21
LMX1B-202ENST00000373474 TNNQ9UQP3 1299 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 METAP2P50579 478 aaKnown RBP eCLIP16.34■□□□□ 0.21
LMX1B-202ENST00000373474 KRT222Q8N1A0 295 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 NAA15Q9BXJ9 866 aaKnown RBP16.34■□□□□ 0.21
LMX1B-202ENST00000373474 F13A1P00488 732 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 TMEM67Q5HYA8 995 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 CACNA2D4Q7Z3S7 1137 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 NECAB1Q8N987 351 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 TRERF1Q96PN7 1200 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 PYM1Q9BRP8 204 aaKnown RBP16.34■□□□□ 0.21
LMX1B-202ENST00000373474 CCDC113Q9H0I3 377 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 USO1O60763 962 aaKnown RBP16.34■□□□□ 0.21
LMX1B-202ENST00000373474 RLBP1P12271 317 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 CTR9Q6PD62 1173 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 CPLX3Q8WVH0 158 aa16.34■□□□□ 0.21
LMX1B-202ENST00000373474 ANO6Q4KMQ2 910 aa16.33■□□□□ 0.2
LMX1B-202ENST00000373474 ZSCAN29Q8IWY8 852 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-202ENST00000373474 C16orf71Q8IYS4 520 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-202ENST00000373474 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.2
LMX1B-202ENST00000373474 GTPBP4Q9BZE4 634 aaKnown RBP16.33■□□□□ 0.2
LMX1B-202ENST00000373474 TMX1Q9H3N1 280 aa16.33■□□□□ 0.2
LMX1B-202ENST00000373474 NUTM2BA6NNL0 878 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-202ENST00000373474 NUTM2EB1AL46 878 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-202ENST00000373474 LMAN1P49257 510 aa16.33■□□□□ 0.2
LMX1B-202ENST00000373474 NUTM2AQ8IVF1 878 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-202ENST00000373474 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
LMX1B-202ENST00000373474 IFNL2Q8IZJ0 200 aa16.33■□□□□ 0.2
LMX1B-202ENST00000373474 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.2
LMX1B-202ENST00000373474 RBM8AQ9Y5S9 174 aaKnown RBP16.33■□□□□ 0.2
LMX1B-202ENST00000373474 TMEM266Q2M3C6 531 aa16.32■□□□□ 0.2
LMX1B-202ENST00000373474 PANK2Q9BZ23 570 aa16.32■□□□□ 0.2
LMX1B-202ENST00000373474 RAB34Q9BZG1 259 aa16.32■□□□□ 0.2
LMX1B-202ENST00000373474 DCTPP1Q9H773 170 aa16.32■□□□□ 0.2
LMX1B-202ENST00000373474 ZBTB40Q9NUA8 1239 aa16.32■□□□□ 0.2
LMX1B-202ENST00000373474 FBLN1P23142 703 aa16.32■□□□□ 0.2
LMX1B-202ENST00000373474 NOLC1Q14978 699 aaKnown RBP eCLIP16.32■□□□□ 0.2
LMX1B-202ENST00000373474 DZIP1Q86YF9 867 aaKnown RBP16.32■□□□□ 0.2
LMX1B-202ENST00000373474 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
LMX1B-202ENST00000373474 POTEJP0CG39 1038 aa16.32■□□□□ 0.2
LMX1B-202ENST00000373474 CCDC102BQ68D86 513 aa16.32■□□□□ 0.2
LMX1B-202ENST00000373474 CCDC194A0A1B0GVG4 234 aa16.32■□□□□ 0.2
LMX1B-202ENST00000373474 CEP85Q6P2H3 762 aa16.32■□□□□ 0.2
LMX1B-202ENST00000373474 UHRF1BP1Q6BDS2 1440 aa16.31■□□□□ 0.2
LMX1B-202ENST00000373474 FAM200AQ8TCP9 573 aa16.31■□□□□ 0.2
LMX1B-202ENST00000373474 A2MP01023 1474 aa16.31■□□□□ 0.2
LMX1B-202ENST00000373474 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
LMX1B-202ENST00000373474 HSPA4P34932 840 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms