RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 SETD1BQ9UPS6 1966 aaKnown RBP11.63□□□□□ -0.55
CSMD2-203ENST00000373377 KDRP35968 1356 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 CRB1P82279 1406 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 KRT85P78386 507 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 TYRO3Q06418 890 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 AACSQ86V21 672 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 TTC14Q96N46 770 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 TTC21AQ8NDW8 1320 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 CRYBG1Q9Y4K1 1723 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 FGD1P98174 961 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 TPD52L1Q16890 204 aaPredicted RBP11.62□□□□□ -0.55
CSMD2-203ENST00000373377 ZNF771Q7L3S4 317 aaPredicted RBP11.62□□□□□ -0.55
CSMD2-203ENST00000373377 IL17REQ8NFR9 667 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 DNAJC25Q9H1X3 360 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 BOLA2Q9H3K6 86 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 ARHGEF10O15013 1369 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 KCNQ3O43525 872 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 HSP90B1P14625 803 aaKnown RBP11.62□□□□□ -0.55
CSMD2-203ENST00000373377 SPATA32Q96LK8 384 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 TPCN1Q9ULQ1 816 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 NDUFB9Q9Y6M9 179 aa11.62□□□□□ -0.55
CSMD2-203ENST00000373377 STRCP1A6NGW2 1772 aa11.61□□□□□ -0.55
CSMD2-203ENST00000373377 RGPD2P0DJD1 1756 aa11.61□□□□□ -0.55
CSMD2-203ENST00000373377 THEMISQ8N1K5 641 aaPredicted RBP11.61□□□□□ -0.55
CSMD2-203ENST00000373377 ERCC4Q92889 916 aaPredicted RBP11.61□□□□□ -0.55
CSMD2-203ENST00000373377 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
CSMD2-203ENST00000373377 EID1Q9Y6B2 187 aa11.61□□□□□ -0.55
CSMD2-203ENST00000373377 MED1Q15648 1581 aaPredicted RBP11.61□□□□□ -0.55
CSMD2-203ENST00000373377 TNNT1P13805 278 aa11.61□□□□□ -0.55
CSMD2-203ENST00000373377 SSH3Q8TE77 659 aa11.61□□□□□ -0.55
CSMD2-203ENST00000373377 RUFY2Q8WXA3 655 aa11.61□□□□□ -0.55
CSMD2-203ENST00000373377 LRRC2Q9BYS8 371 aa11.61□□□□□ -0.55
CSMD2-203ENST00000373377 TRMT1Q9NXH9 659 aaKnown RBP11.61□□□□□ -0.55
CSMD2-203ENST00000373377 RBM8AQ9Y5S9 174 aaKnown RBP11.61□□□□□ -0.55
CSMD2-203ENST00000373377 DMTNQ08495 405 aa11.6□□□□□ -0.55
CSMD2-203ENST00000373377 FILIP1Q7Z7B0 1213 aa11.6□□□□□ -0.55
CSMD2-203ENST00000373377 SYTL4Q96C24 671 aaPredicted RBP11.6□□□□□ -0.55
CSMD2-203ENST00000373377 CWF19L2Q2TBE0 894 aaKnown RBP11.6□□□□□ -0.55
CSMD2-203ENST00000373377 KLHDC4Q8TBB5 520 aa11.6□□□□□ -0.55
CSMD2-203ENST00000373377 FAM200AQ8TCP9 573 aa11.6□□□□□ -0.55
CSMD2-203ENST00000373377 EDC3Q96F86 508 aaKnown RBP11.6□□□□□ -0.55
CSMD2-203ENST00000373377 FSD1Q9BTV5 496 aa11.6□□□□□ -0.55
CSMD2-203ENST00000373377 TAF6LQ9Y6J9 622 aa11.6□□□□□ -0.55
CSMD2-203ENST00000373377 LARP1Q6PKG0 1096 aaKnown RBP11.6□□□□□ -0.55
CSMD2-203ENST00000373377 CBX8Q9HC52 389 aa11.6□□□□□ -0.55
CSMD2-203ENST00000373377 LMO7Q8WWI1 1683 aa11.6□□□□□ -0.55
CSMD2-203ENST00000373377 ALS2Q96Q42 1657 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 SLIT3O75094 1523 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 SBNO1A3KN83 1393 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 GLRX3O76003 335 aaKnown RBP11.59□□□□□ -0.55
CSMD2-203ENST00000373377 ARID5BQ14865 1188 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 RBM33Q96EV2 1170 aaKnown RBP11.59□□□□□ -0.55
CSMD2-203ENST00000373377 MRVI1Q9Y6F6 885 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 ZNF165P49910 485 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 TMEM87AQ8NBN3 555 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 LGR6Q9HBX8 967 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 SPTLC3Q9NUV7 552 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 CLIP2Q9UDT6 1046 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
CSMD2-203ENST00000373377 ADGRL3Q9HAR2 1447 aa11.58□□□□□ -0.55
CSMD2-203ENST00000373377 H3BQV1 296 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 NR1I2O75469 434 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 NMIQ13287 307 aaPredicted RBP11.58□□□□□ -0.56
CSMD2-203ENST00000373377 IFFO2Q5TF58 517 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 CREB3L3Q68CJ9 461 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 DNAAF4Q8WXU2 420 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 FUCA2Q9BTY2 467 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 KIF1AQ12756 1690 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 JAK2O60674 1132 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 ST3GAL1Q11201 340 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 BLOC1S2Q6QNY1 142 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 ECHDC1Q9NTX5 307 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 ADAMTS7Q9UKP4 1686 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 GOLGA6L19H0YKK7 550 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 MPRIPQ6WCQ1 1025 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 CCDC112Q8NEF3 446 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 GPATCH3Q96I76 525 aa11.58□□□□□ -0.56
CSMD2-203ENST00000373377 KCNA6P17658 529 aa11.57□□□□□ -0.56
CSMD2-203ENST00000373377 GUCY1B3Q02153 619 aa11.57□□□□□ -0.56
CSMD2-203ENST00000373377 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
CSMD2-203ENST00000373377 ABTB2Q8N961 1025 aa11.57□□□□□ -0.56
CSMD2-203ENST00000373377 MST1RQ04912 1400 aa11.57□□□□□ -0.56
CSMD2-203ENST00000373377 SIPA1L3O60292 1781 aaPredicted RBP11.57□□□□□ -0.56
CSMD2-203ENST00000373377 CHGBP05060 677 aa11.57□□□□□ -0.56
CSMD2-203ENST00000373377 TEFQ10587 303 aa11.57□□□□□ -0.56
CSMD2-203ENST00000373377 VPS53Q5VIR6 699 aa11.57□□□□□ -0.56
CSMD2-203ENST00000373377 TLR7Q9NYK1 1049 aaKnown RBP11.57□□□□□ -0.56
CSMD2-203ENST00000373377 TUBGCP6Q96RT7 1819 aa11.56□□□□□ -0.56
CSMD2-203ENST00000373377 FTOQ9C0B1 505 aaKnown RBP eCLIP11.56□□□□□ -0.56
CSMD2-203ENST00000373377 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.56□□□□□ -0.56
CSMD2-203ENST00000373377 NCAPD2Q15021 1401 aa11.56□□□□□ -0.56
CSMD2-203ENST00000373377 FLT4P35916 1363 aa11.56□□□□□ -0.56
CSMD2-203ENST00000373377 BECN2A8MW95 431 aa11.56□□□□□ -0.56
CSMD2-203ENST00000373377 MAPK8IP2Q13387 824 aaPredicted RBP11.56□□□□□ -0.56
CSMD2-203ENST00000373377 FMNL2Q96PY5 1086 aa11.56□□□□□ -0.56
CSMD2-203ENST00000373377 SH2B1Q9NRF2 756 aaPredicted RBP11.56□□□□□ -0.56
CSMD2-203ENST00000373377 CGNQ9P2M7 1197 aaKnown RBP11.56□□□□□ -0.56
CSMD2-203ENST00000373377 MAP3K2Q9Y2U5 619 aa11.56□□□□□ -0.56
CSMD2-203ENST00000373377 CCDC171Q6TFL3 1326 aa11.56□□□□□ -0.56
CSMD2-203ENST00000373377 A0A0D9SFI3 127 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms