RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 SCLT1Q96NL6 688 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 CPSF2Q9P2I0 782 aaKnown RBP10.07□□□□□ -0.8
PTPRT-204ENST00000373190 KIF14Q15058 1648 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 TNIP1Q15025 636 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 SPG7Q9UQ90 795 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 CAMSAP2Q08AD1 1489 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 CYLC1P35663 651 aaPredicted RBP10.07□□□□□ -0.8
PTPRT-204ENST00000373190 DDX54Q8TDD1 881 aaKnown RBP10.07□□□□□ -0.8
PTPRT-204ENST00000373190 RRS1Q15050 365 aaKnown RBP10.07□□□□□ -0.8
PTPRT-204ENST00000373190 TTC14Q96N46 770 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 PLVAPQ9BX97 442 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 RMND1Q9NWS8 449 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 CTNNA2P26232 953 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 DAAM2Q86T65 1068 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 CFAP57Q96MR6 1250 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 SELENOOQ9BVL4 669 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 C8orf34Q49A92 452 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 RBM42Q9BTD8 480 aaKnown RBP10.07□□□□□ -0.8
PTPRT-204ENST00000373190 KIAA0753Q2KHM9 967 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 UBA5Q9GZZ9 404 aa10.07□□□□□ -0.8
PTPRT-204ENST00000373190 KCNG4Q8TDN1 519 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 RNF216Q9NWF9 866 aaPredicted RBP10.06□□□□□ -0.8
PTPRT-204ENST00000373190 RALGAPBQ86X10 1494 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 IGHDP01880 384 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 LARP6Q9BRS8 491 aaKnown RBP10.06□□□□□ -0.8
PTPRT-204ENST00000373190 HOMER2Q9NSB8 354 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 AKR1B10O60218 316 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 TYRO3Q06418 890 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 RNF41Q9H4P4 317 aaPredicted RBP10.06□□□□□ -0.8
PTPRT-204ENST00000373190 CCDC194A0A1B0GVG4 234 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 CC2D2AQ9P2K1 1620 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 ITSN2Q9NZM3 1697 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 CATIPQ7Z7H3 387 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 TCP11L1Q9NUJ3 509 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.06□□□□□ -0.8
PTPRT-204ENST00000373190 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 IQCA1Q86XH1 822 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 CALML4Q96GE6 196 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 CCDC40Q4G0X9 1142 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 DNAI2Q9GZS0 605 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 IGHMBP2P38935 993 aaKnown RBP10.06□□□□□ -0.8
PTPRT-204ENST00000373190 KRBA2Q6ZNG9 492 aa10.06□□□□□ -0.8
PTPRT-204ENST00000373190 A0A1B0GUL7 405 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 METTL24Q5JXM2 366 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 NEK1Q96PY6 1258 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 FAM76AQ8TAV0 307 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 A0A1B0GUA9 196 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 ISM2Q6H9L7 571 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 MCM10Q7L590 875 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 CCDC129Q6ZRS4 1044 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 CCDC172P0C7W6 258 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 FERP16591 822 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 DDX46Q7L014 1031 aaKnown RBP10.05□□□□□ -0.8
PTPRT-204ENST00000373190 SMC5Q8IY18 1101 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 MYO1BO43795 1136 aa10.05□□□□□ -0.8
PTPRT-204ENST00000373190 EIF2AK4Q9P2K8 1649 aaKnown RBP10.05□□□□□ -0.8
PTPRT-204ENST00000373190 GOLGA8AA7E2F4 631 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 POLR3DP05423 398 aaPredicted RBP10.04□□□□□ -0.8
PTPRT-204ENST00000373190 B4GALNT4Q76KP1 1039 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 TACC1O75410 805 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 MAP3K12Q12852 859 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 ASXL1Q8IXJ9 1541 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTPRT-204ENST00000373190 KRT86O43790 486 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 TROQ12816 1431 aaPredicted RBP10.04□□□□□ -0.8
PTPRT-204ENST00000373190 CCDC160A6NGH7 325 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 SREK1Q8WXA9 508 aaKnown RBP10.04□□□□□ -0.8
PTPRT-204ENST00000373190 ECHDC1Q9NTX5 307 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 SEPT6Q14141 434 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 ESCO1Q5FWF5 840 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 TRIM47Q96LD4 638 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 THUMPD2Q9BTF0 503 aaKnown RBP10.04□□□□□ -0.8
PTPRT-204ENST00000373190 NLRP5P59047 1200 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 PPP1R14CQ8TAE6 165 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 GTF3C6Q969F1 213 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 DNAJC25Q9H1X3 360 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 NSD2O96028 1365 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 PRXQ9BXM0 1461 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 PRPHP41219 470 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 SPAG1Q07617 926 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 WDR66Q8TBY9 1149 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 RTL1A6NKG5 1358 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 IFIT1P09914 478 aaKnown RBP10.04□□□□□ -0.8
PTPRT-204ENST00000373190 SDSP20132 328 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 MIS18AQ9NYP9 233 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 MINDY4BA8MYZ0 360 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 CCDC82Q8N4S0 544 aa10.04□□□□□ -0.8
PTPRT-204ENST00000373190 KIF5BP33176 963 aa10.03□□□□□ -0.8
PTPRT-204ENST00000373190 ACTN2P35609 894 aa10.03□□□□□ -0.8
PTPRT-204ENST00000373190 AOPEPQ8N6M6 819 aa10.03□□□□□ -0.8
PTPRT-204ENST00000373190 MRPS27Q92552 414 aaKnown RBP10.03□□□□□ -0.8
PTPRT-204ENST00000373190 CCDC114Q96M63 670 aa10.03□□□□□ -0.8
PTPRT-204ENST00000373190 IFIT3O14879 490 aaKnown RBP10.03□□□□□ -0.8
PTPRT-204ENST00000373190 IARSP41252 1262 aaKnown RBP10.03□□□□□ -0.8
PTPRT-204ENST00000373190 KRT83P78385 493 aa10.03□□□□□ -0.8
PTPRT-204ENST00000373190 MXRA7P84157 204 aa10.03□□□□□ -0.8
PTPRT-204ENST00000373190 SAMD15Q9P1V8 674 aa10.03□□□□□ -0.8
PTPRT-204ENST00000373190 DRC1Q96MC2 740 aa10.03□□□□□ -0.8
PTPRT-204ENST00000373190 IQCGQ9H095 443 aaKnown RBP10.03□□□□□ -0.8
PTPRT-204ENST00000373190 PTGS1P23219 599 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms