RNA–Protein interactions for RNA: ENST00000372771.4

RLF-201, Transcript of rearranged L-myc fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLF, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLF-201ENST00000372771 KLHL40Q2TBA0 621 aa17.23■□□□□ 0.35
RLF-201ENST00000372771 A2MP01023 1474 aa17.22■□□□□ 0.35
RLF-201ENST00000372771 CTAGE5O15320 804 aa17.22■□□□□ 0.35
RLF-201ENST00000372771 TAF3Q5VWG9 929 aa17.22■□□□□ 0.35
RLF-201ENST00000372771 CCDC148Q8NFR7 591 aa17.22■□□□□ 0.35
RLF-201ENST00000372771 RPGRQ92834 1020 aaKnown RBP17.22■□□□□ 0.35
RLF-201ENST00000372771 NUP88Q99567 741 aaPredicted RBP17.22■□□□□ 0.35
RLF-201ENST00000372771 STX1AQ16623 288 aa17.22■□□□□ 0.35
RLF-201ENST00000372771 CCDC194A0A1B0GVG4 234 aa17.22■□□□□ 0.35
RLF-201ENST00000372771 ASXL2Q76L83 1435 aa17.22■□□□□ 0.35
RLF-201ENST00000372771 NCOA7Q8NI08 942 aa17.22■□□□□ 0.35
RLF-201ENST00000372771 SSR1P43307 286 aaKnown RBP17.22■□□□□ 0.35
RLF-201ENST00000372771 ATP8B2P98198 1209 aa17.22■□□□□ 0.35
RLF-201ENST00000372771 ZSCAN12O43309 604 aa17.21■□□□□ 0.35
RLF-201ENST00000372771 MFSD6Q6ZSS7 791 aa17.21■□□□□ 0.35
RLF-201ENST00000372771 USP48Q86UV5 1035 aa17.21■□□□□ 0.35
RLF-201ENST00000372771 KIF18AQ8NI77 898 aa17.21■□□□□ 0.35
RLF-201ENST00000372771 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
RLF-201ENST00000372771 TAF4BQ92750 862 aa17.21■□□□□ 0.35
RLF-201ENST00000372771 TMOD2Q9NZR1 351 aa17.21■□□□□ 0.35
RLF-201ENST00000372771 NUP160Q12769 1436 aa17.21■□□□□ 0.35
RLF-201ENST00000372771 TTF1Q15361 905 aaPredicted RBP17.21■□□□□ 0.35
RLF-201ENST00000372771 SPA17Q15506 151 aa17.21■□□□□ 0.35
RLF-201ENST00000372771 KLF18A0A0U1RQI7 1052 aa17.21■□□□□ 0.35
RLF-201ENST00000372771 IBSPP21815 317 aaPredicted RBP17.21■□□□□ 0.35
RLF-201ENST00000372771 ZNF165P49910 485 aa17.21■□□□□ 0.35
RLF-201ENST00000372771 VAMP4O75379 141 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 KIF4BQ2VIQ3 1234 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 IQCEQ6IPM2 695 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 RIMS2Q9UQ26 1411 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 KIF5CO60282 957 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 FKBP15Q5T1M5 1219 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 TRMT1LQ7Z2T5 733 aaKnown RBP17.2■□□□□ 0.34
RLF-201ENST00000372771 CACNA2D4Q7Z3S7 1137 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 HMG20BQ9P0W2 317 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 GRM8O00222 908 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 CWF19L2Q2TBE0 894 aaKnown RBP17.2■□□□□ 0.34
RLF-201ENST00000372771 CEP85Q6P2H3 762 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 TMCO3Q6UWJ1 677 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 CABLES1Q8TDN4 633 aa17.2■□□□□ 0.34
RLF-201ENST00000372771 ANKRD62A6NC57 917 aa17.19■□□□□ 0.34
RLF-201ENST00000372771 NMIQ13287 307 aaPredicted RBP17.19■□□□□ 0.34
RLF-201ENST00000372771 HSP90AA4PQ58FG1 418 aa17.19■□□□□ 0.34
RLF-201ENST00000372771 Q6ZUG5 572 aa17.19■□□□□ 0.34
RLF-201ENST00000372771 A0A1W2PP64 1363 aa17.19■□□□□ 0.34
RLF-201ENST00000372771 RRP9O43818 475 aaKnown RBP17.19■□□□□ 0.34
RLF-201ENST00000372771 LMBR1LQ6UX01 489 aa17.19■□□□□ 0.34
RLF-201ENST00000372771 ACSBG1Q96GR2 724 aa17.19■□□□□ 0.34
RLF-201ENST00000372771 TSPY2A6NKD2 308 aa17.19■□□□□ 0.34
RLF-201ENST00000372771 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
RLF-201ENST00000372771 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
RLF-201ENST00000372771 PRKCSHP14314 528 aaPredicted RBP17.19■□□□□ 0.34
RLF-201ENST00000372771 CCDC191Q8NCU4 936 aa17.19■□□□□ 0.34
RLF-201ENST00000372771 LRSAM1Q6UWE0 723 aa17.18■□□□□ 0.34
RLF-201ENST00000372771 CHST3Q7LGC8 479 aa17.18■□□□□ 0.34
RLF-201ENST00000372771 NGLY1Q96IV0 654 aa17.18■□□□□ 0.34
RLF-201ENST00000372771 TSG101Q99816 390 aa17.18■□□□□ 0.34
RLF-201ENST00000372771 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
RLF-201ENST00000372771 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
RLF-201ENST00000372771 SEPT7Q16181 437 aaKnown RBP17.18■□□□□ 0.34
RLF-201ENST00000372771 ABCC1P33527 1531 aa17.18■□□□□ 0.34
RLF-201ENST00000372771 TCOF1Q13428 1488 aaKnown RBP17.18■□□□□ 0.34
RLF-201ENST00000372771 PAF1Q8N7H5 531 aa17.18■□□□□ 0.34
RLF-201ENST00000372771 DNM1Q05193 864 aaKnown RBP17.17■□□□□ 0.34
RLF-201ENST00000372771 KIAA0556O60303 1618 aa17.17■□□□□ 0.34
RLF-201ENST00000372771 KIAA0754O94854 1291 aa17.17■□□□□ 0.34
RLF-201ENST00000372771 MCM5P33992 734 aa17.17■□□□□ 0.34
RLF-201ENST00000372771 ZGPATQ8N5A5 531 aaKnown RBP17.17■□□□□ 0.34
RLF-201ENST00000372771 KSR2Q6VAB6 950 aa17.17■□□□□ 0.34
RLF-201ENST00000372771 CDC5LQ99459 802 aaKnown RBP17.17■□□□□ 0.34
RLF-201ENST00000372771 AKAP4Q5JQC9 854 aa17.17■□□□□ 0.34
RLF-201ENST00000372771 ANO6Q4KMQ2 910 aa17.16■□□□□ 0.34
RLF-201ENST00000372771 ZCRB1Q8TBF4 217 aaKnown RBP17.16■□□□□ 0.34
RLF-201ENST00000372771 WDR62O43379 1518 aa17.16■□□□□ 0.34
RLF-201ENST00000372771 KAT14Q9H8E8 782 aa17.16■□□□□ 0.34
RLF-201ENST00000372771 ZBTB40Q9NUA8 1239 aa17.16■□□□□ 0.34
RLF-201ENST00000372771 TMEM266Q2M3C6 531 aa17.16■□□□□ 0.34
RLF-201ENST00000372771 NFATC2IPQ8NCF5 419 aa17.16■□□□□ 0.34
RLF-201ENST00000372771 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.16■□□□□ 0.34
RLF-201ENST00000372771 UHRF1BP1LA0JNW5 1464 aa17.16■□□□□ 0.34
RLF-201ENST00000372771 MSH6P52701 1360 aa17.16■□□□□ 0.34
RLF-201ENST00000372771 TDRD12Q587J7 1177 aaKnown RBP17.16■□□□□ 0.34
RLF-201ENST00000372771 TEX13AQ9BXU3 409 aaPredicted RBP17.16■□□□□ 0.34
RLF-201ENST00000372771 KIF2AO00139 706 aaPredicted RBP17.15■□□□□ 0.34
RLF-201ENST00000372771 CHMP4BP1P59074 171 aa17.15■□□□□ 0.34
RLF-201ENST00000372771 XRCC6P12956 609 aaKnown RBP eCLIP17.15■□□□□ 0.342e-6■■□□□ 13.7
RLF-201ENST00000372771 MCMDC2Q4G0Z9 681 aa17.15■□□□□ 0.34
RLF-201ENST00000372771 PPP1R12BO60237 982 aaPredicted RBP17.15■□□□□ 0.34
RLF-201ENST00000372771 MTIF2P46199 727 aaKnown RBP17.15■□□□□ 0.34
RLF-201ENST00000372771 PLEKHM2Q8IWE5 1019 aa17.15■□□□□ 0.34
RLF-201ENST00000372771 IDEP14735 1019 aa17.14■□□□□ 0.33
RLF-201ENST00000372771 MARCKSP29966 332 aaPredicted RBP17.14■□□□□ 0.33
RLF-201ENST00000372771 JAKMIP3Q5VZ66 844 aa17.14■□□□□ 0.33
RLF-201ENST00000372771 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
RLF-201ENST00000372771 POLR3GO15318 223 aaPredicted RBP17.14■□□□□ 0.33
RLF-201ENST00000372771 AFMP43652 599 aa17.14■□□□□ 0.33
RLF-201ENST00000372771 CCDC178Q5BJE1 867 aa17.14■□□□□ 0.33
RLF-201ENST00000372771 EYA1Q99502 592 aa17.14■□□□□ 0.33
RLF-201ENST00000372771 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms