RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 IPO9Q96P70 1041 aaKnown RBP20.08■□□□□ 0.8
C9orf78-201ENST00000372447 METTL22Q9BUU2 404 aaPredicted RBP20.08■□□□□ 0.8
C9orf78-201ENST00000372447 ZBTB7BO15156 539 aaPredicted RBP20.07■□□□□ 0.8
C9orf78-201ENST00000372447 GPTP24298 496 aa20.07■□□□□ 0.8
C9orf78-201ENST00000372447 ZNF34Q8IZ26 560 aa20.07■□□□□ 0.8
C9orf78-201ENST00000372447 NIP7Q9Y221 180 aaKnown RBP eCLIP20.07■□□□□ 0.8
C9orf78-201ENST00000372447 HSP90AB3PQ58FF7 597 aa20.06■□□□□ 0.8
C9orf78-201ENST00000372447 MYD88Q99836 296 aa20.06■□□□□ 0.8
C9orf78-201ENST00000372447 ATP5J2-PTCD1G3V325 749 aa20.06■□□□□ 0.8
C9orf78-201ENST00000372447 MMP10P09238 476 aa20.06■□□□□ 0.8
C9orf78-201ENST00000372447 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
C9orf78-201ENST00000372447 NUP98P52948 1817 aa20.05■□□□□ 0.8
C9orf78-201ENST00000372447 ATP10DQ9P241 1426 aa20.05■□□□□ 0.8
C9orf78-201ENST00000372447 DDR1Q08345 913 aa20.05■□□□□ 0.8
C9orf78-201ENST00000372447 ISCA1Q9BUE6 129 aa20.05■□□□□ 0.8
C9orf78-201ENST00000372447 SLC4A10Q6U841 1118 aa20.04■□□□□ 0.8
C9orf78-201ENST00000372447 ARFGEF2Q9Y6D5 1785 aa20.04■□□□□ 0.8
C9orf78-201ENST00000372447 UBN2Q6ZU65 1347 aa20.04■□□□□ 0.8
C9orf78-201ENST00000372447 SRCAPQ6ZRS2 3230 aa20.04■□□□□ 0.8
C9orf78-201ENST00000372447 POLRMTO00411 1230 aaKnown RBP20.03■□□□□ 0.8
C9orf78-201ENST00000372447 IGKV5-2P06315 115 aa20.03■□□□□ 0.8
C9orf78-201ENST00000372447 SGIP1Q9BQI5 828 aa20.03■□□□□ 0.8
C9orf78-201ENST00000372447 PTGER2P43116 358 aa20.03■□□□□ 0.8
C9orf78-201ENST00000372447 NEXNQ0ZGT2 675 aa20.03■□□□□ 0.8
C9orf78-201ENST00000372447 BEND3Q5T5X7 828 aa20.03■□□□□ 0.8
C9orf78-201ENST00000372447 SMC5Q8IY18 1101 aa20.03■□□□□ 0.8
C9orf78-201ENST00000372447 SPON1Q9HCB6 807 aa20.03■□□□□ 0.8
C9orf78-201ENST00000372447 TRIM28Q13263 835 aaKnown RBP20.02■□□□□ 0.8
C9orf78-201ENST00000372447 CWF19L2Q2TBE0 894 aaKnown RBP20.02■□□□□ 0.8
C9orf78-201ENST00000372447 ERICH6Q7L0X2 663 aa20.02■□□□□ 0.8
C9orf78-201ENST00000372447 NLRP10Q86W26 655 aa20.02■□□□□ 0.8
C9orf78-201ENST00000372447 ANP32EQ9BTT0 268 aa20.02■□□□□ 0.8
C9orf78-201ENST00000372447 FAM177BA6PVY3 158 aa20.01■□□□□ 0.79
C9orf78-201ENST00000372447 SUSD4Q5VX71 490 aa20.01■□□□□ 0.79
C9orf78-201ENST00000372447 LINS1Q8NG48 757 aa20.01■□□□□ 0.79
C9orf78-201ENST00000372447 PARP3Q9Y6F1 533 aa20.01■□□□□ 0.79
C9orf78-201ENST00000372447 CARMIL3Q8ND23 1372 aa20.01■□□□□ 0.79
C9orf78-201ENST00000372447 SERPINB2P05120 415 aa20■□□□□ 0.79
C9orf78-201ENST00000372447 POLD1P28340 1107 aa20■□□□□ 0.79
C9orf78-201ENST00000372447 PARP10Q53GL7 1025 aa20■□□□□ 0.79
C9orf78-201ENST00000372447 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
C9orf78-201ENST00000372447 NEURL1BA8MQ27 555 aa20■□□□□ 0.79
C9orf78-201ENST00000372447 INTS3Q68E01 1043 aaKnown RBP20■□□□□ 0.79
C9orf78-201ENST00000372447 CCDC191Q8NCU4 936 aa20■□□□□ 0.79
C9orf78-201ENST00000372447 SRCIN1Q9C0H9 1055 aa19.99■□□□□ 0.79
C9orf78-201ENST00000372447 COL24A1Q17RW2 1714 aa19.98■□□□□ 0.79
C9orf78-201ENST00000372447 NBPF5PQ86XG9 351 aaPredicted RBP19.98■□□□□ 0.79
C9orf78-201ENST00000372447 CWC25Q9NXE8 425 aaPredicted RBP19.98■□□□□ 0.79
C9orf78-201ENST00000372447 TPTE2Q6XPS3 522 aa19.98■□□□□ 0.79
C9orf78-201ENST00000372447 PPP1R42Q7Z4L9 355 aa19.98■□□□□ 0.79
C9orf78-201ENST00000372447 UTP14AQ9BVJ6 771 aaKnown RBP19.98■□□□□ 0.79
C9orf78-201ENST00000372447 NTSR2O95665 410 aa19.97■□□□□ 0.79
C9orf78-201ENST00000372447 C1orf115Q9H7X2 142 aa19.97■□□□□ 0.79
C9orf78-201ENST00000372447 ZBTB47Q9UFB7 747 aaPredicted RBP19.97■□□□□ 0.79
C9orf78-201ENST00000372447 TRMT112Q9UI30 125 aaKnown RBP19.97■□□□□ 0.79
C9orf78-201ENST00000372447 ANKRD36CQ5JPF3 1778 aa19.97■□□□□ 0.79
C9orf78-201ENST00000372447 ALDH1L1O75891 902 aa19.96■□□□□ 0.79
C9orf78-201ENST00000372447 GCKRQ14397 625 aa19.96■□□□□ 0.79
C9orf78-201ENST00000372447 PRR5LQ6MZQ0 368 aa19.96■□□□□ 0.79
C9orf78-201ENST00000372447 NUTM1Q86Y26 1132 aa19.96■□□□□ 0.79
C9orf78-201ENST00000372447 SYNE4Q8N205 404 aa19.96■□□□□ 0.79
C9orf78-201ENST00000372447 CCDC24Q8N4L8 307 aa19.96■□□□□ 0.79
C9orf78-201ENST00000372447 PXDNLA1KZ92 1463 aa19.96■□□□□ 0.79
C9orf78-201ENST00000372447 CCT4P50991 539 aaKnown RBP19.95■□□□□ 0.78
C9orf78-201ENST00000372447 RTL5Q5HYW3 569 aaPredicted RBP19.95■□□□□ 0.78
C9orf78-201ENST00000372447 CNBD1Q8NA66 436 aa19.95■□□□□ 0.78
C9orf78-201ENST00000372447 FAM89AQ96GI7 184 aa19.95■□□□□ 0.78
C9orf78-201ENST00000372447 NYXQ9GZU5 481 aa19.95■□□□□ 0.78
C9orf78-201ENST00000372447 NUCB1Q02818 461 aa19.95■□□□□ 0.78
C9orf78-201ENST00000372447 JARID2Q92833 1246 aaPredicted RBP19.95■□□□□ 0.78
C9orf78-201ENST00000372447 NPHP1O15259 732 aa19.94■□□□□ 0.78
C9orf78-201ENST00000372447 GTF2E1P29083 439 aaPredicted RBP19.94■□□□□ 0.78
C9orf78-201ENST00000372447 ERFEQ4G0M1 354 aa19.94■□□□□ 0.78
C9orf78-201ENST00000372447 ZBTB38Q8NAP3 1195 aaPredicted RBP19.94■□□□□ 0.78
C9orf78-201ENST00000372447 IBTKQ9P2D0 1353 aaPredicted RBP19.94■□□□□ 0.78
C9orf78-201ENST00000372447 GCC1Q96CN9 775 aa19.93■□□□□ 0.78
C9orf78-201ENST00000372447 H7C1W4 665 aa19.93■□□□□ 0.78
C9orf78-201ENST00000372447 PCCAP05165 728 aaPredicted RBP19.93■□□□□ 0.78
C9orf78-201ENST00000372447 AFDNP55196 1824 aaKnown RBP19.92■□□□□ 0.78
C9orf78-201ENST00000372447 SH3TC1Q8TE82 1336 aa19.92■□□□□ 0.78
C9orf78-201ENST00000372447 NRXN2Q9P2S2 1712 aa19.92■□□□□ 0.78
C9orf78-201ENST00000372447 SIRT2Q8IXJ6 389 aa19.92■□□□□ 0.78
C9orf78-201ENST00000372447 DDRGK1Q96HY6 314 aa19.92■□□□□ 0.78
C9orf78-201ENST00000372447 USP44Q9H0E7 712 aa19.92■□□□□ 0.78
C9orf78-201ENST00000372447 ST5P78524 1137 aa19.91■□□□□ 0.78
C9orf78-201ENST00000372447 UBE3BQ7Z3V4 1068 aa19.91■□□□□ 0.78
C9orf78-201ENST00000372447 C9orf78Q9NZ63 289 aaPredicted RBP19.91■□□□□ 0.78
C9orf78-201ENST00000372447 GRM8O00222 908 aa19.9■□□□□ 0.78
C9orf78-201ENST00000372447 NBPF7P0C2Y1 421 aaPredicted RBP19.9■□□□□ 0.78
C9orf78-201ENST00000372447 CASP7P55210 303 aa19.9■□□□□ 0.78
C9orf78-201ENST00000372447 CHD1LQ86WJ1 897 aa19.9■□□□□ 0.78
C9orf78-201ENST00000372447 ABCC12Q96J65 1359 aa19.9■□□□□ 0.78
C9orf78-201ENST00000372447 HCLS1P14317 486 aaPredicted RBP19.9■□□□□ 0.78
C9orf78-201ENST00000372447 SLC10A5Q5PT55 438 aa19.9■□□□□ 0.78
C9orf78-201ENST00000372447 BRIP1Q9BX63 1249 aa19.89■□□□□ 0.77
C9orf78-201ENST00000372447 PPP1R1BQ9UD71 204 aaPredicted RBP19.89■□□□□ 0.77
C9orf78-201ENST00000372447 UTYO14607 1347 aa19.89■□□□□ 0.77
C9orf78-201ENST00000372447 IRS4O14654 1257 aaPredicted RBP19.88■□□□□ 0.77
C9orf78-201ENST00000372447 C10orf71Q711Q0 1435 aa19.88■□□□□ 0.77
C9orf78-201ENST00000372447 MEIS3Q99687 375 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms